Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002755-TA|BGIBMGA002755-PA|IPR009036|Molybdenum cofactor
biosynthesis, IPR000594|UBA/THIF-type NAD/FAD binding fold
(339 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4C5.04 |rad31|uba4|SUMO E1-like activator enzyme Rad31|Schiz... 126 6e-30
SPBC1604.21c |ptr3|uba1, SPBC211.09|ubiquitin activating enzyme ... 91 2e-19
SPAC323.06c |uba5||NEDD8 activating enzyme |Schizosaccharomyces ... 65 1e-11
SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme Fub2|Schiz... 58 2e-09
SPAC2G11.10c |||URM1 activating enzyme |Schizosaccharomyces pomb... 55 1e-08
SPAC24H6.12c |uba3||NEDD8 activating enzyme|Schizosaccharomyces ... 46 6e-06
SPAC1A6.10 ||SPAC30D11.15c|Moeb/ThiF domain|Schizosaccharomyces ... 38 0.002
SPBC6B1.05c |||ubiquitin-like conjugating enzyme|Schizosaccharom... 32 0.13
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 27 3.8
SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomy... 27 5.1
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 27 5.1
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 26 8.8
SPAC4A8.14 |prs1||ribose-phosphate pyrophosphokinase Prs1|Schizo... 26 8.8
>SPAC4C5.04 |rad31|uba4|SUMO E1-like activator enzyme
Rad31|Schizosaccharomyces pombe|chr 1|||Manual
Length = 307
Score = 126 bits (303), Expect = 6e-30
Identities = 62/172 (36%), Positives = 101/172 (58%), Gaps = 2/172 (1%)
Query: 2 VGNNEVELSEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSV 61
+GN+ + E YDRQIRLWG ++Q+ L+ ++VL+I S L EIAKN++L+G+ +
Sbjct: 1 MGNHNINAEEIAL--YDRQIRLWGFNAQQALKQSRVLLITASPLANEIAKNLVLSGIGKL 58
Query: 62 CLLDNEKLKQIDLYSQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGVDELPDSFF 121
C+LD+ + + D+ QF IG RA ++ LNP+V++ + T + E+ +
Sbjct: 59 CVLDSMTVYEKDVEEQFFIEASDIGQLRANVFKKKLHELNPLVEIDTDTSLISEIDEGKI 118
Query: 122 TEFDVVCATGLKQEQFERINNACRDSNKKFICGDVWGTYGYMFSDLVDHEYS 173
++F +V AT L E+F RIN R N F +G YG+ F DL++H ++
Sbjct: 119 SKFSMVIATQLDYEEFCRINELTRICNASFYATSCFGLYGFAFCDLINHNFA 170
>SPBC1604.21c |ptr3|uba1, SPBC211.09|ubiquitin activating enzyme
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1012
Score = 91.5 bits (217), Expect = 2e-19
Identities = 56/150 (37%), Positives = 79/150 (52%), Gaps = 4/150 (2%)
Query: 17 YDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYS 76
Y RQ+ + G ++ K++ + VLIIG GLG EIAKNV L GVKSV L D + + DL S
Sbjct: 20 YSRQLYVLGHEAMKQMSQSNVLIIGCKGLGVEIAKNVCLAGVKSVTLYDPQPTRIEDLSS 79
Query: 77 QFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGVDELPDSFFTEFDVVCATGLKQEQ 136
Q+ D IGV RA+ ++ + LN V V+ VDEL + F V T +
Sbjct: 80 QYFLTEDDIGVPRAKVTVSKLAELNQYVPVSV----VDELSTEYLKNFKCVVVTETSLTK 135
Query: 137 FERINNACRDSNKKFICGDVWGTYGYMFSD 166
IN+ ++ +I D G +G +F D
Sbjct: 136 QLEINDFTHKNHIAYIAADSRGLFGSIFCD 165
Score = 46.0 bits (104), Expect = 8e-06
Identities = 27/113 (23%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 16 QYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKS-----VCLLDNEKLK 70
+YD QI ++G + Q+++ + ++G +G E+ KN + GV + + + D + ++
Sbjct: 409 RYDGQIAVFGSEFQEKIASLSTFLVGAGAIGCEMLKNWAMMGVATGESGHISVTDMDSIE 468
Query: 71 QIDLYSQFLCPPDKIGVNRAEGSLERARGLNPMV--DVTSHTKGVDELPDSFF 121
+ +L QFL P +G ++E + +NP + +TS+ + V + F
Sbjct: 469 KSNLNRQFLFRPRDVGKLKSECASTAVSIMNPSLTGKITSYQERVGPESEGIF 521
>SPAC323.06c |uba5||NEDD8 activating enzyme |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 500
Score = 65.3 bits (152), Expect = 1e-11
Identities = 43/167 (25%), Positives = 81/167 (48%), Gaps = 5/167 (2%)
Query: 10 SEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKL 69
+ A+ ++YDRQ+RLW + Q + + V ++ + +G E KN+IL G+ S ++D+ +
Sbjct: 3 TSAKMQKYDRQVRLWKAEGQNAIEKSHVCLLYANTVGCEALKNLILPGIGSFAVVDDTSV 62
Query: 70 KQIDLYSQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGVDELPD---SFFTEFDV 126
F D+ G +RA + + LNP V++ + L D +F++F V
Sbjct: 63 DFSMDGMNFFIQYDQEGKSRARCTASLLQQLNPNVEMEYLEMSPEALIDKNIEYFSKFSV 122
Query: 127 VCATGLKQEQFERINNACRDSNKKFICGDVWGTYGYMFSDLVDHEYS 173
V ++ LK++ R+ R + + G G + + HEY+
Sbjct: 123 VLSSNLKEKPLFRLEEYLRSHKIPLLHFNSVGFAGIL--RISTHEYT 167
>SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme
Fub2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 58.0 bits (134), Expect = 2e-09
Identities = 31/121 (25%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Query: 26 LDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFLCPPDKI 85
+++ + ++AKVL++G G+G E+ KN++++GVK V ++D + + +L QFL +
Sbjct: 17 VEALRNFKSAKVLLVGAGGIGCELLKNLLMSGVKEVHIIDLDTIDLSNLNRQFLFRKKHV 76
Query: 86 GVNRAEGSLERARGLNPMVDVTSHTKGV--DELPDSFFTEFDVVCATGLKQEQFERINNA 143
+A + + A NP V + ++ + D ++F +FD+V + +N
Sbjct: 77 KQPKAIVAAKTASSFNPNVKLEAYHANIKEDRFNVAWFRQFDLVFNALDNLDARRHVNKQ 136
Query: 144 C 144
C
Sbjct: 137 C 137
>SPAC2G11.10c |||URM1 activating enzyme |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 401
Score = 55.2 bits (127), Expect = 1e-08
Identities = 31/108 (28%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Query: 4 NNEVELSEAEAEQYDRQIRLW--GLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSV 61
+N +ELS E +Y RQ+ L GL Q L+ + VL+IG GLG + ++ G+ ++
Sbjct: 11 SNGLELSLDEYSRYGRQMLLSEIGLPGQLSLKRSSVLVIGAGGLGCPAMQYLVAAGIGTL 70
Query: 62 CLLDNEKLKQIDLYSQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSH 109
++D + + + +L+ Q + K G+++A + + LNP V + ++
Sbjct: 71 GIMDGDVVDKSNLHRQIIHSTSKQGMHKAISAKQFLEDLNPNVIINTY 118
>SPAC24H6.12c |uba3||NEDD8 activating enzyme|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 444
Score = 46.4 bits (105), Expect = 6e-06
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 27 DSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFLCPPDKIG 86
++ K ++K+LIIG GLG EI K++ L+G + + ++D + + +L QFL I
Sbjct: 37 ETLKSAFSSKILIIGAGGLGCEILKDLALSGFRDLSVIDMDTIDITNLNRQFLFNESNID 96
Query: 87 VNRAEGSLERARGLNPMVDVTSHTKGVDELPDSFFTEFDVVCATGLKQEQFERINNA 143
+A + P VT + + F+ EF ++ GL + R N+
Sbjct: 97 EPKANVAASMIMKRIPSTVVTPFYGKIQDKTIEFYKEFKLIIC-GLDSVEARRWINS 152
>SPAC1A6.10 ||SPAC30D11.15c|Moeb/ThiF domain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 485
Score = 38.3 bits (85), Expect = 0.002
Identities = 19/92 (20%), Positives = 44/92 (47%)
Query: 15 EQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDL 74
EQ R +G D +RLR + V+++G G+G+ + + +GV+ + ++D +++ L
Sbjct: 107 EQLARNYAFFGEDGMERLRNSFVIVVGCGGVGSWVINMLARSGVQKIRIVDFDQVSLSSL 166
Query: 75 YSQFLCPPDKIGVNRAEGSLERARGLNPMVDV 106
+ +G + + + P ++V
Sbjct: 167 NRHSIATLQDVGTPKTLAIKKAIKKFAPWIEV 198
>SPBC6B1.05c |||ubiquitin-like conjugating
enzyme|Schizosaccharomyces pombe|chr 2|||Manual
Length = 649
Score = 31.9 bits (69), Expect = 0.13
Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Query: 9 LSEAEAEQYDRQIRLWGLDSQ---KRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLD 65
LSE+ A + + W L Q R++ +K L++G LG +A+N++ GV+ V +D
Sbjct: 308 LSES-ASTLNLSLMRWRLVPQLDLDRIQNSKCLLLGAGTLGCGVARNLLSWGVRHVTFVD 366
Query: 66 NEKLKQIDLYSQ--FLCPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGVDEL 116
+ + Q F K + +AE + +R + + P + T + + L
Sbjct: 367 YSTVSYSNPVRQSLFTFEDCKRKLPKAECAAQRLKEIYPNMFSTGYNISIPML 419
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 228 RRGDCGYFAMKLLLRFRDEYNRNPDPARRKDDINLLLKMRDEIVREL 274
R GD G +L F + Y N + + +D L+ K E++ +L
Sbjct: 1577 RYGDVGELIADFMLMFNNAYTYNEEHSIVYEDAKLMEKTLKEVIEDL 1623
>SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1019
Score = 26.6 bits (56), Expect = 5.1
Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 4/73 (5%)
Query: 157 WGTYGYMFSDLVDHEYSEEIVQHKATKRGPDDEEKNARETVSITVKRRAIYVPLQ---NA 213
WG G D D EE+ +++A+ P DEE+ E S Y +
Sbjct: 929 WGFLGAPSDDEGDDSV-EEVSEYEASDADPSDEEEEESEEYSEDASEEDGYSESEVEDEE 987
Query: 214 LSADWNSPEMRSR 226
DW+ E ++R
Sbjct: 988 SGEDWDELERKAR 1000
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 57 GVKSVCLLDNEKLKQIDLY 75
G SVCLL E LKQ +LY
Sbjct: 89 GTTSVCLLVGELLKQAELY 107
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 25.8 bits (54), Expect = 8.8
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 239 LLLRFRDEYNRNPDPARRK 257
LLLR + + +RNP P RR+
Sbjct: 119 LLLRHQQKIHRNPQPRRRR 137
>SPAC4A8.14 |prs1||ribose-phosphate pyrophosphokinase
Prs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 409
Score = 25.8 bits (54), Expect = 8.8
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 45 LGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFLCPPD 83
LG I I+T SVC + ++++LYSQ CP D
Sbjct: 240 LGHIIDDEEIITTPASVC--SEDYAQEVNLYSQGGCPSD 276
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.137 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,538,476
Number of Sequences: 5004
Number of extensions: 62044
Number of successful extensions: 154
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 136
Number of HSP's gapped (non-prelim): 18
length of query: 339
length of database: 2,362,478
effective HSP length: 73
effective length of query: 266
effective length of database: 1,997,186
effective search space: 531251476
effective search space used: 531251476
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 54 (25.8 bits)
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