GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002755-TA|BGIBMGA002755-PA|IPR009036|Molybdenum cofactor
biosynthesis, IPR000594|UBA/THIF-type NAD/FAD binding fold
         (339 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   3.0  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 4/109 (3%)

Query: 51   KNVILTGVKSVCLLDNEKLKQIDLYSQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHT 110
            K V L G      ++N K K++  YS+     +++   R   + +  + L P+    +HT
Sbjct: 1831 KAVQLPGGAVRVTIENAKGKKVAKYSKVGSYENRLSTWRYGSNDKLQQELPPIYHYRAHT 1890

Query: 111  KGVDELPDSFFTEFDVVCATGLKQEQFERIN--NACRDSNKKFICGDVW 157
              ++ +P  FF          L+Q+   R N  NA R   K+   G +W
Sbjct: 1891 STMENVP--FFVANYTSEQMQLQQQWEVRYNYDNANRLIRKRTPDGGIW 1937


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.137    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 343,321
Number of Sequences: 2123
Number of extensions: 13322
Number of successful extensions: 27
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 27
Number of HSP's gapped (non-prelim): 1
length of query: 339
length of database: 516,269
effective HSP length: 64
effective length of query: 275
effective length of database: 380,397
effective search space: 104609175
effective search space used: 104609175
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 48 (23.4 bits)