Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002755-TA|BGIBMGA002755-PA|IPR009036|Molybdenum cofactor
biosynthesis, IPR000594|UBA/THIF-type NAD/FAD binding fold
(339 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72502-7|CAA96591.1| 343|Caenorhabditis elegans Hypothetical pr... 114 1e-25
Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical p... 95 5e-20
Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical p... 95 5e-20
U13875-1|AAA21162.2| 541|Caenorhabditis elegans Yeast ula (ubiq... 82 5e-16
AF038618-6|AAB92067.2| 402|Caenorhabditis elegans Hypothetical ... 59 5e-09
Z82062-5|CAB54319.4| 582|Caenorhabditis elegans Hypothetical pr... 56 3e-08
U40187-3|AAA81160.2| 430|Caenorhabditis elegans Ectopic membran... 56 5e-08
U88169-12|AAB42231.1| 419|Caenorhabditis elegans Hypothetical p... 44 2e-04
Z68337-10|CAA92753.1| 647|Caenorhabditis elegans Hypothetical p... 39 0.004
AL032641-8|CAA21650.1| 647|Caenorhabditis elegans Hypothetical ... 39 0.004
U49954-1|AAA93426.1| 388|Caenorhabditis elegans Hypothetical pr... 28 8.3
>Z72502-7|CAA96591.1| 343|Caenorhabditis elegans Hypothetical
protein C08B6.9 protein.
Length = 343
Score = 114 bits (274), Expect = 1e-25
Identities = 90/342 (26%), Positives = 161/342 (47%), Gaps = 21/342 (6%)
Query: 7 VELSEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDN 66
+E+S+AE YDRQIRLWG+++Q ++R +KVLIIG LGAE+AK + L GV + L+D+
Sbjct: 1 MEVSKAEQAIYDRQIRLWGMEAQNKIRNSKVLIIGGKQLGAEVAKTLSLAGVDEMHLVDH 60
Query: 67 EKLKQIDLYSQFL--CPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGV----DELPDSF 120
+ ++ FL D + + S LN V + + V D + +
Sbjct: 61 RLVDTEEIGMNFLYDASVDNSKMTKWAASYNFLYNLNRNVKLFIVEEDVLSKNDSEIEEY 120
Query: 121 FTEFDVVCATGLKQEQFERINNACRDSNKKFICGDVWGTYGYMFSDLVDHEYSEEIVQHK 180
T+F +V E+ ++NN CR + +FI G ++G GY F D H Y +V+ K
Sbjct: 121 LTKFTLVVVLDESYERTAKVNNICRKHHIRFISGAIYGWIGYAFFDFDGHAY---LVKAK 177
Query: 181 ATKRGPDDEEKNARETVSITVKRRAI-----YVPLQNALSADWNSPEMRSRLRR-GDCGY 234
+ ++E + + + +TV + Y L++D+ + ++ + +R Y
Sbjct: 178 SPDCLNEEESETGKTSTVVTVDEEFVLETFSYPSFVETLNSDFTAKKIVRKCKRIVPTSY 237
Query: 235 FAMKLLLRFRDEYNRNPDPARRKDDINLLLKMRDEIVR--ELSLPASFIKDSLFYDVFX- 291
F +K +LR E N ++DI L+ + +E V ++ ++ F +F
Sbjct: 238 FLVKSMLRASSE---NKLTGVTENDIEKLIPIWNEEVAAGNHTIDMQPVQPDRFDHLFGP 294
Query: 292 XXXXXXXXXXXXXXQEVVKAVSQREPPHNNMFFFNPIKCLGY 333
QE +K++S+ + P N+F + + G+
Sbjct: 295 NFGPTAACVGGVIGQEAIKSISEGKNPLRNLFIYTGFESTGF 336
>Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical
protein C47E12.5b protein.
Length = 1028
Score = 95.5 bits (227), Expect = 5e-20
Identities = 62/169 (36%), Positives = 84/169 (49%), Gaps = 5/169 (2%)
Query: 2 VGNNEVELSEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSV 61
VG N EL + Y RQI G + LR A VLI GL +G EIAKN+IL GV+ V
Sbjct: 10 VGGNSDELLDKNL--YSRQIYTLGESAMVNLRTASVLISGLGSVGVEIAKNLILGGVRHV 67
Query: 62 CLLDNEKLKQIDLYSQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGVDELPDSFF 121
+ D + K DL +Q+ +G NRA ER LN V+V T DEL + F
Sbjct: 68 TIHDTKLAKWSDLSAQYYLRDADVGHNRATSCYERLAELNDSVNVQVST---DELTEEFV 124
Query: 122 TEFDVVCATGLKQEQFERINNACRDSNKKFICGDVWGTYGYMFSDLVDH 170
FD+V T + +I R N++ + D G + Y+F+D D+
Sbjct: 125 KTFDLVVLTDAARTAQRQIAAWTRAHNRRILITDARGVFSYIFNDFGDN 173
Score = 34.7 bits (76), Expect = 0.095
Identities = 27/125 (21%), Positives = 57/125 (45%), Gaps = 9/125 (7%)
Query: 8 ELSEAEAE----QYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKS--- 60
+LSE + + +YD Q ++G Q+ L + ++G +G E+ KN+ + GV
Sbjct: 402 KLSETDCQPRQSRYDGQAAVFGWPYQECLFRQRWFVVGAGAIGCELLKNLSMMGVACGEG 461
Query: 61 --VCLLDNEKLKQIDLYSQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGVDELPD 118
+ + D ++++ +L QFL +G ++E + N V + + + V +
Sbjct: 462 GLIKITDMDQIEISNLNRQFLFRRRDVGGKKSECAARAVTAFNSDVRIEALAERVGLETE 521
Query: 119 SFFTE 123
F +
Sbjct: 522 HIFND 526
>Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical
protein C47E12.5a protein.
Length = 1113
Score = 95.5 bits (227), Expect = 5e-20
Identities = 62/169 (36%), Positives = 84/169 (49%), Gaps = 5/169 (2%)
Query: 2 VGNNEVELSEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSV 61
VG N EL + Y RQI G + LR A VLI GL +G EIAKN+IL GV+ V
Sbjct: 95 VGGNSDELLDKNL--YSRQIYTLGESAMVNLRTASVLISGLGSVGVEIAKNLILGGVRHV 152
Query: 62 CLLDNEKLKQIDLYSQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGVDELPDSFF 121
+ D + K DL +Q+ +G NRA ER LN V+V T DEL + F
Sbjct: 153 TIHDTKLAKWSDLSAQYYLRDADVGHNRATSCYERLAELNDSVNVQVST---DELTEEFV 209
Query: 122 TEFDVVCATGLKQEQFERINNACRDSNKKFICGDVWGTYGYMFSDLVDH 170
FD+V T + +I R N++ + D G + Y+F+D D+
Sbjct: 210 KTFDLVVLTDAARTAQRQIAAWTRAHNRRILITDARGVFSYIFNDFGDN 258
Score = 34.7 bits (76), Expect = 0.095
Identities = 27/125 (21%), Positives = 57/125 (45%), Gaps = 9/125 (7%)
Query: 8 ELSEAEAE----QYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKS--- 60
+LSE + + +YD Q ++G Q+ L + ++G +G E+ KN+ + GV
Sbjct: 487 KLSETDCQPRQSRYDGQAAVFGWPYQECLFRQRWFVVGAGAIGCELLKNLSMMGVACGEG 546
Query: 61 --VCLLDNEKLKQIDLYSQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGVDELPD 118
+ + D ++++ +L QFL +G ++E + N V + + + V +
Sbjct: 547 GLIKITDMDQIEISNLNRQFLFRRRDVGGKKSECAARAVTAFNSDVRIEALAERVGLETE 606
Query: 119 SFFTE 123
F +
Sbjct: 607 HIFND 611
>U13875-1|AAA21162.2| 541|Caenorhabditis elegans Yeast ula
(ubiquitin activating)homolog protein 1 protein.
Length = 541
Score = 82.2 bits (194), Expect = 5e-16
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 3/158 (1%)
Query: 16 QYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLY 75
+YDRQ+RLWG + Q + + ++G L EI K+++L GV+S ++D+ K++Q D+
Sbjct: 9 RYDRQVRLWGEEGQASIGSTSACVLGSDSLATEILKSLVLAGVQSFYVVDDAKVEQADIG 68
Query: 76 SQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGVDEL---PDSFFTEFDVVCATGL 132
F D IG +RAE +LE+ LNP V ++ ++ L T F VV A
Sbjct: 69 QNFFLHADDIGRSRAEATLEKLTELNPSVSGSASSQPPTALAMEDVEKLTTFSVVVAANQ 128
Query: 133 KQEQFERINNACRDSNKKFICGDVWGTYGYMFSDLVDH 170
+E + FIC +G G + + +H
Sbjct: 129 NEEIDTTFAKVLYNIRVPFICIKTFGLIGTIRICIKEH 166
>AF038618-6|AAB92067.2| 402|Caenorhabditis elegans Hypothetical
protein F42G8.6 protein.
Length = 402
Score = 58.8 bits (136), Expect = 5e-09
Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 3/149 (2%)
Query: 9 LSEAEAEQYDRQIRL--WGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDN 66
+S+ +A +Y RQ+ + +G+ QK L+ VLI+G GLG +A + G+ ++ ++D
Sbjct: 10 ISKKDAGRYSRQLLVDDFGVSGQKNLKNLNVLIVGAGGLGCPVATYLGAAGIGTIGIVDY 69
Query: 67 EKLKQIDLYSQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGVDEL-PDSFFTEFD 125
+ + +L+ Q D++G ++A+ + + N ++V H +D F ++
Sbjct: 70 DHISLDNLHRQVAYKEDQVGKSKAQALADNIKLQNSDLNVQVHNTSLDSSNAMQLFKNYE 129
Query: 126 VVCATGLKQEQFERINNACRDSNKKFICG 154
+VC IN+ C N + G
Sbjct: 130 IVCDCTDNVATRYLINDVCVLLNIPLVSG 158
>Z82062-5|CAB54319.4| 582|Caenorhabditis elegans Hypothetical
protein W02A11.4 protein.
Length = 582
Score = 56.4 bits (130), Expect = 3e-08
Identities = 31/137 (22%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 27 DSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFLCPPDKIG 86
+ +++ +K+L+IG G+G E+ KN+ +TG + V ++D + + +L QFL + +
Sbjct: 6 EKHEKIVQSKILVIGAGGIGCELLKNLAVTGFRKVHVIDLDTIDISNLNRQFLFRKEHVS 65
Query: 87 VNRAEGSLERARGLNPMVDVTSHTKGVDELPDS--FFTEFDVVCATGLKQEQFERINNAC 144
++A + + + P +++T + E + FF +D+V + +N C
Sbjct: 66 SSKAATATQVVKQFCPQIELTFDHDSIFEKKYNMEFFQAYDIVLNALDNRAARNYVNRMC 125
Query: 145 RDSNKKFICGDVWGTYG 161
+N+ I G +G
Sbjct: 126 HAANRPLIDSGSGGYFG 142
>U40187-3|AAA81160.2| 430|Caenorhabditis elegans Ectopic membrane
ruffles in embryoprotein 1 protein.
Length = 430
Score = 55.6 bits (128), Expect = 5e-08
Identities = 27/103 (26%), Positives = 57/103 (55%)
Query: 25 GLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFLCPPDK 84
G ++ + L+ K+L+IG GLG E+ KN+ L+G +++ ++D + + +L QFL
Sbjct: 33 GPENFEALQNTKILVIGAGGLGCELLKNLALSGFRTIEVIDMDTIDVSNLNRQFLFRESD 92
Query: 85 IGVNRAEGSLERARGLNPMVDVTSHTKGVDELPDSFFTEFDVV 127
+G ++AE + + VT+H +++ F+ +F ++
Sbjct: 93 VGKSKAEVAAAFVQQRVVGCQVTAHNCRIEDKGQEFYRKFSII 135
>U88169-12|AAB42231.1| 419|Caenorhabditis elegans Hypothetical
protein T03F1.1 protein.
Length = 419
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/101 (22%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Query: 22 RLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFLCP 81
R+ ++ +R+R V ++G+ G+G+ +A+ + G+ + L D +K+ +I ++
Sbjct: 72 RMGIVNEYERIREKTVAVVGVGGVGSVVAEMLTRCGIGKLILFDYDKV-EIANMNRLFYQ 130
Query: 82 PDKIGVNRAEGSLERARGLNPMVDVTSHTKGVDELPDSFFT 122
P++ G+++ E + + +NP V + H + + D+F T
Sbjct: 131 PNQAGLSKVEAARDTLIHVNPDVQIEVHNFNITTM-DNFDT 170
>Z68337-10|CAA92753.1| 647|Caenorhabditis elegans Hypothetical
protein M7.5 protein.
Length = 647
Score = 39.1 bits (87), Expect = 0.004
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Query: 30 KRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFLCPPD--KIGV 87
+R KVLI+G LG IA+ +I GV+ + LDN + + Q L + ++G
Sbjct: 320 ERYSQLKVLILGAGTLGCNIARCLIGWGVRHISFLDNSTVSYNNPVRQSLSEFEDARLGR 379
Query: 88 NRAEGSLERARGLNPMVDVTSHTKGVDELPDSFFTEFDV 126
+AE + + + P + T+H V +P E DV
Sbjct: 380 GKAETAQAAIQRIFPSIQATAHRLTV-PMPGHSIDEKDV 417
>AL032641-8|CAA21650.1| 647|Caenorhabditis elegans Hypothetical
protein M7.5 protein.
Length = 647
Score = 39.1 bits (87), Expect = 0.004
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Query: 30 KRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFLCPPD--KIGV 87
+R KVLI+G LG IA+ +I GV+ + LDN + + Q L + ++G
Sbjct: 320 ERYSQLKVLILGAGTLGCNIARCLIGWGVRHISFLDNSTVSYNNPVRQSLSEFEDARLGR 379
Query: 88 NRAEGSLERARGLNPMVDVTSHTKGVDELPDSFFTEFDV 126
+AE + + + P + T+H V +P E DV
Sbjct: 380 GKAETAQAAIQRIFPSIQATAHRLTV-PMPGHSIDEKDV 417
>U49954-1|AAA93426.1| 388|Caenorhabditis elegans Hypothetical
protein Y102E9.2 protein.
Length = 388
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/35 (45%), Positives = 19/35 (54%)
Query: 252 DPARRKDDINLLLKMRDEIVRELSLPASFIKDSLF 286
D A D LL+ RDE VR L PA+ + DS F
Sbjct: 160 DVAFSPDGKRLLMADRDEKVRALRYPATSVIDSFF 194
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.320 0.137 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,303,493
Number of Sequences: 27539
Number of extensions: 337233
Number of successful extensions: 802
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 785
Number of HSP's gapped (non-prelim): 14
length of query: 339
length of database: 12,573,161
effective HSP length: 82
effective length of query: 257
effective length of database: 10,314,963
effective search space: 2650945491
effective search space used: 2650945491
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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