GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002753-TA|BGIBMGA002753-PA|IPR000437|Prokaryotic
membrane lipoprotein lipid attachment site,
IPR001991|Sodium:dicarboxylate symporter
         (170 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    25   1.6  

>AF291654-1|AAG00600.1| 1340|Anopheles gambiae
          thioester-containing protein I protein.
          Length = 1340

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 12 KFIRENLLTILTVVGVAAGTLL 33
          +FIR  +LT++  +G A G L+
Sbjct: 3  QFIRSRILTVIIFIGAAHGLLV 24


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.324    0.138    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,112
Number of Sequences: 2123
Number of extensions: 3930
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 22
Number of HSP's gapped (non-prelim): 1
length of query: 170
length of database: 516,269
effective HSP length: 60
effective length of query: 110
effective length of database: 388,889
effective search space: 42777790
effective search space used: 42777790
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 45 (22.2 bits)