Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002753-TA|BGIBMGA002753-PA|IPR000437|Prokaryotic
membrane lipoprotein lipid attachment site,
IPR001991|Sodium:dicarboxylate symporter
(170 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43282-3|AAA83614.3| 499|Caenorhabditis elegans Glutamate trans... 117 4e-27
U51998-3|AAL00857.1| 503|Caenorhabditis elegans Glutamate trans... 108 2e-24
D86741-1|BAA21840.1| 503|Caenorhabditis elegans glutamate trans... 108 2e-24
D86740-1|BAA13164.1| 503|Caenorhabditis elegans glutamate trans... 108 2e-24
U35250-1|AAB41909.1| 503|Caenorhabditis elegans CeGlt-2 protein. 107 5e-24
U51998-4|AAL00858.1| 492|Caenorhabditis elegans Glutamate trans... 105 1e-23
U35250-2|AAB41910.1| 492|Caenorhabditis elegans CeGlt-1 protein. 104 3e-23
U58746-1|AAB00621.2| 558|Caenorhabditis elegans Glutamate trans... 100 1e-21
Z99277-1|CAB16485.1| 491|Caenorhabditis elegans Hypothetical pr... 96 1e-20
AF125964-9|AAD14749.2| 523|Caenorhabditis elegans Glutamate tra... 82 2e-16
Z68879-3|CAA93084.1| 532|Caenorhabditis elegans Hypothetical pr... 79 2e-15
>U43282-3|AAA83614.3| 499|Caenorhabditis elegans Glutamate
transporter family protein4 protein.
Length = 499
Score = 117 bits (282), Expect = 4e-27
Identities = 56/116 (48%), Positives = 80/116 (68%)
Query: 12 KFIRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRMLKSLIVPLL 71
K +ENLL + TV+GV G LG LR WSKR + Y +FPG+LF++MLK LI+P++
Sbjct: 3 KLSKENLLLLFTVLGVVVGIGLGFSLRDPSKAWSKRHLSYLRFPGDLFVQMLKMLILPMI 62
Query: 72 VSSIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPGSNSKGNEE 127
+SSI++++ SLD +G++G+ ++IYY TT AV LGI LV+ IKPG + N E
Sbjct: 63 MSSIITSLASLDSGTAGRLGMVSMIYYTLTTFFAVFLGIVLVSVIKPGKWTTTNIE 118
>U51998-3|AAL00857.1| 503|Caenorhabditis elegans Glutamate
transporter family protein1, isoform a protein.
Length = 503
Score = 108 bits (259), Expect = 2e-24
Identities = 54/116 (46%), Positives = 74/116 (63%), Gaps = 2/116 (1%)
Query: 4 QFNRKACPKFIRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRML 63
+ N++ +IR+NLL +LTV V G L CG G Q S +++MY FPGEL + ML
Sbjct: 6 RINKEIMVSWIRKNLLLVLTVSSVVLGAL--CGFLLRGLQLSPQNIMYISFPGELLMHML 63
Query: 64 KSLIVPLLVSSIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPG 119
K +I+PL++SS++S + LD SGK+G A+ YYM TT AV+ GI LV I PG
Sbjct: 64 KMMILPLIMSSLISGLAQLDARQSGKLGSLAVTYYMFTTAVAVVTGIFLVLVIHPG 119
>D86741-1|BAA21840.1| 503|Caenorhabditis elegans glutamate
transporter protein.
Length = 503
Score = 108 bits (259), Expect = 2e-24
Identities = 54/116 (46%), Positives = 74/116 (63%), Gaps = 2/116 (1%)
Query: 4 QFNRKACPKFIRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRML 63
+ N++ +IR+NLL +LTV V G L CG G Q S +++MY FPGEL + ML
Sbjct: 6 RINKEIMVSWIRKNLLLVLTVSSVVLGAL--CGFLLRGLQLSPQNIMYISFPGELLMHML 63
Query: 64 KSLIVPLLVSSIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPG 119
K +I+PL++SS++S + LD SGK+G A+ YYM TT AV+ GI LV I PG
Sbjct: 64 KMMILPLIMSSLISGLAQLDARQSGKLGSLAVTYYMFTTAVAVVTGIFLVLVIHPG 119
>D86740-1|BAA13164.1| 503|Caenorhabditis elegans glutamate
transporter protein.
Length = 503
Score = 108 bits (259), Expect = 2e-24
Identities = 54/116 (46%), Positives = 74/116 (63%), Gaps = 2/116 (1%)
Query: 4 QFNRKACPKFIRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRML 63
+ N++ +IR+NLL +LTV V G L CG G Q S +++MY FPGEL + ML
Sbjct: 6 RINKEIMVSWIRKNLLLVLTVSSVVLGAL--CGFLLRGLQLSPQNIMYISFPGELLMHML 63
Query: 64 KSLIVPLLVSSIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPG 119
K +I+PL++SS++S + LD SGK+G A+ YYM TT AV+ GI LV I PG
Sbjct: 64 KMMILPLIMSSLISGLAQLDARQSGKLGSLAVTYYMFTTAVAVVTGIFLVLVIHPG 119
>U35250-1|AAB41909.1| 503|Caenorhabditis elegans CeGlt-2 protein.
Length = 503
Score = 107 bits (256), Expect = 5e-24
Identities = 54/116 (46%), Positives = 73/116 (62%), Gaps = 2/116 (1%)
Query: 4 QFNRKACPKFIRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRML 63
+ N++ +IR+NLL +LTV V G L CG G Q S +++MY FPGEL + ML
Sbjct: 6 RINKEIMVSWIRKNLLLVLTVSSVVLGAL--CGFLLRGLQLSPQNIMYISFPGELLMHML 63
Query: 64 KSLIVPLLVSSIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPG 119
K +I PL++SS++S + LD SGK+G A+ YYM TT AV+ GI LV I PG
Sbjct: 64 KMMIPPLIMSSLISGLAQLDARQSGKLGSLAVTYYMFTTAVAVVTGIFLVLVIHPG 119
>U51998-4|AAL00858.1| 492|Caenorhabditis elegans Glutamate
transporter family protein1, isoform b protein.
Length = 492
Score = 105 bits (253), Expect = 1e-23
Identities = 53/107 (49%), Positives = 70/107 (65%), Gaps = 2/107 (1%)
Query: 13 FIRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRMLKSLIVPLLV 72
+IR+NLL +LTV V G L CG G Q S +++MY FPGEL + MLK +I+PL++
Sbjct: 4 WIRKNLLLVLTVSSVVLGAL--CGFLLRGLQLSPQNIMYISFPGELLMHMLKMMILPLIM 61
Query: 73 SSIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPG 119
SS++S + LD SGK+G A+ YYM TT AV+ GI LV I PG
Sbjct: 62 SSLISGLAQLDARQSGKLGSLAVTYYMFTTAVAVVTGIFLVLVIHPG 108
>U35250-2|AAB41910.1| 492|Caenorhabditis elegans CeGlt-1 protein.
Length = 492
Score = 104 bits (250), Expect = 3e-23
Identities = 53/107 (49%), Positives = 69/107 (64%), Gaps = 2/107 (1%)
Query: 13 FIRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRMLKSLIVPLLV 72
+IR+NLL +LTV V G L CG G Q S +++MY FPGEL + MLK +I PL++
Sbjct: 4 WIRKNLLLVLTVSSVVLGAL--CGFLLRGLQLSPQNIMYISFPGELLMHMLKMMIPPLIM 61
Query: 73 SSIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPG 119
SS++S + LD SGK+G A+ YYM TT AV+ GI LV I PG
Sbjct: 62 SSLISGLAQLDARQSGKLGSLAVTYYMFTTAVAVVTGIFLVLVIHPG 108
>U58746-1|AAB00621.2| 558|Caenorhabditis elegans Glutamate
transporter family protein6 protein.
Length = 558
Score = 99.5 bits (237), Expect = 1e-21
Identities = 49/116 (42%), Positives = 75/116 (64%), Gaps = 3/116 (2%)
Query: 12 KFIRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRMLKSLIVPLL 71
+F REN L ++T+ V G +LG GLR S+ + FPGE+F+++LK +I+PL+
Sbjct: 11 QFCRENTLLVMTMFSVFLGVVLGFGLRPLN--LSQETLQLINFPGEIFMQVLKMMILPLI 68
Query: 72 VSSIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPGSNS-KGNE 126
SS++SA+ +D SG++G ++YY++T V A +LGI LVT I PG S KG +
Sbjct: 69 FSSLISALAQMDAKESGQMGASTVLYYLSTAVLATILGIFLVTVIHPGDPSIKGTD 124
>Z99277-1|CAB16485.1| 491|Caenorhabditis elegans Hypothetical
protein Y53C12A.2 protein.
Length = 491
Score = 95.9 bits (228), Expect = 1e-20
Identities = 45/107 (42%), Positives = 73/107 (68%), Gaps = 2/107 (1%)
Query: 13 FIRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRMLKSLIVPLLV 72
++ +N+L ++T+ G+ G ++G LR + S + Y FPGELF+ MLK++++PL+
Sbjct: 15 WLTKNMLLLMTMAGIVMGVIIGGVLRTADP--SPDVIRYVGFPGELFMNMLKAMVLPLIA 72
Query: 73 SSIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPG 119
+SIVS + LD SG++G RA++YY TT AV+LGI +V+ I+PG
Sbjct: 73 ASIVSGLSQLDGKTSGRLGSRAVMYYAITTTHAVILGIIVVSIIQPG 119
>AF125964-9|AAD14749.2| 523|Caenorhabditis elegans Glutamate
transporter family protein7 protein.
Length = 523
Score = 81.8 bits (193), Expect = 2e-16
Identities = 39/106 (36%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
Query: 14 IRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRMLKSLIVPLLVS 73
++E+ L + T++ V G G LR + R+++ FPGE+F+++LK +++PL+ S
Sbjct: 6 MKESQLLVFTLIAVGIGFASGILLRQFDLSDNARNLV--GFPGEIFMQVLKLMVLPLIFS 63
Query: 74 SIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPG 119
S++S++G +D S SGK+ AI YY+TT + A +G+A+V PG
Sbjct: 64 SLISSLGQMDASRSGKMSFIAIAYYLTTVIIASCIGVAMVFLFHPG 109
>Z68879-3|CAA93084.1| 532|Caenorhabditis elegans Hypothetical
protein K08F4.4 protein.
Length = 532
Score = 78.6 bits (185), Expect = 2e-15
Identities = 38/106 (35%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 14 IRENLLTILTVVGVAAGTLLGCGLRASGHQWSKRDVMYFQFPGELFLRMLKSLIVPLLVS 73
++++LL +LT+ V G +LG +R S + FPGE+F+++++ +I+PL++S
Sbjct: 3 MKKDLLLVLTIESVVLGVVLGFVIRPFNP--SNDTISLIGFPGEIFMQIVEMMILPLIMS 60
Query: 74 SIVSAIGSLDLSLSGKVGLRAIIYYMTTTVCAVMLGIALVTTIKPG 119
S++SA+ + + ++G+ IIYYM TT A GI LV++I PG
Sbjct: 61 SVISALAQVRARDARRIGIVTIIYYMITTFLATFTGIILVSSIHPG 106
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.324 0.138 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,947,734
Number of Sequences: 27539
Number of extensions: 95679
Number of successful extensions: 281
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 262
Number of HSP's gapped (non-prelim): 11
length of query: 170
length of database: 12,573,161
effective HSP length: 76
effective length of query: 94
effective length of database: 10,480,197
effective search space: 985138518
effective search space used: 985138518
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 56 (26.6 bits)
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