GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002751-TA|BGIBMGA002751-PA|IPR001611|Leucine-rich
repeat, IPR003591|Leucine-rich repeat, typical subtype
         (775 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           35   0.009
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            32   0.066
AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.           27   2.5  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 34.7 bits (76), Expect = 0.009
 Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 6/105 (5%)

Query: 1   MGKNRIKRIEG--LSNLIKLKVLDLHGNRIGKVCG--LSNLVELKVLNLAGNQIKGIGIT 56
           +  N+I ++E    S+L  L++L+L  N++  +     S +  L  L L+ N++K +   
Sbjct: 375 LASNKITKLESEIFSDLYTLQILNLRHNQLEIIAADTFSPMNNLHTLLLSHNKLKYLDAY 434

Query: 57  DLQGL--ASXXXXXXXXXXXXXXQGFQNTPKLQKLYLGNNDLQSV 99
            L GL   S              + F+N   LQ L L  N+L  V
Sbjct: 435 SLNGLYALSLLSLDNNALTGVHPEAFRNCSSLQDLNLNGNELTQV 479



 Score = 31.9 bits (69), Expect = 0.066
 Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 3/50 (6%)

Query: 11  GLSNLIKLKVLDLHGNRIGKV--CGLSNLVELKVLNLAGNQIKGIGITDL 58
           G   L +LK+L +H N I  V    LS L EL++L+L+ N++  +  TDL
Sbjct: 264 GFGMLKRLKMLKIHDNEISMVGDKALSGLNELQILDLSSNKLVALP-TDL 312


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 31.9 bits (69), Expect = 0.066
 Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 5/92 (5%)

Query: 18  LKVLDLHGNRI-GKVCGL-SNLVELKVLNLAGNQIKGIGITDLQGLASXXXXXXXXXXXX 75
           L+VL L  N++ G   GL  N VEL  L L+ NQI  +    LQ L              
Sbjct: 378 LQVLQLQHNQLTGLPAGLLRNTVELHTLRLSHNQIGELSAVALQALTKLQELYLDHNQLY 437

Query: 76  XXQ--GFQNTPKLQKLYLGNNDLQSVEDMSTL 105
             +   F+ T  L  L+L  N L + E ++TL
Sbjct: 438 TIELHAFKQTTALHTLHLQVNQL-AFETLNTL 468


>AF444782-1|AAL37903.1|  576|Anopheles gambiae Toll9 protein.
          Length = 576

 Score = 26.6 bits (56), Expect = 2.5
 Identities = 29/122 (23%), Positives = 48/122 (39%), Gaps = 3/122 (2%)

Query: 18  LKVLDLHGNRIGKVCGLSNLVELKVLNLAGNQIKGIGITDLQGLASXXXXXXXXXXXXX- 76
           L+VL    + + ++  L  L  L+VLNL GN ++ +       L +              
Sbjct: 160 LEVLYFKDSMVQQLNWLVPLQRLRVLNLRGNILRMLQRESFANLTNLEQLDLSYNYISAW 219

Query: 77  -XQGFQNTPKLQKLYLGNNDLQSVEDMSTLSEATSLIDISLDGNPVALGGDCTPFLVSYL 135
             Q    T  LQ + L NN +  +     L + + L  + L GN +    +   FL + L
Sbjct: 220 NQQILTTTTALQSVNLRNNSI-VILTTDMLYDFSRLSAMGLGGNTIQCSCNYVKFLRNIL 278

Query: 136 PN 137
            N
Sbjct: 279 HN 280


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.131    0.381 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,787
Number of Sequences: 2123
Number of extensions: 22365
Number of successful extensions: 112
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 110
Number of HSP's gapped (non-prelim): 4
length of query: 775
length of database: 516,269
effective HSP length: 69
effective length of query: 706
effective length of database: 369,782
effective search space: 261066092
effective search space used: 261066092
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 52 (25.0 bits)