Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002746-TA|BGIBMGA002746-PA|IPR008161|Collagen helix
repeat, IPR008160|Collagen triple helix repeat
(135 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 52 7e-09
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 44 2e-06
DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2 pro... 23 3.5
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 52.0 bits (119), Expect = 7e-09
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 1 MKGAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGLDAPCPLGH 60
++G +GE G G+RGDPGLPG+ G PG++G + +G PG P GH
Sbjct: 114 LRGPKGERGGMGDRGDPGLPGSLGYPGEKGDLGTPGPPGYPGDVGPKGEPGPKGPA--GH 171
Query: 61 DGLP 64
G P
Sbjct: 172 PGAP 175
Score = 47.6 bits (108), Expect = 1e-07
Identities = 31/76 (40%), Positives = 33/76 (43%), Gaps = 10/76 (13%)
Query: 3 GAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGLDAPCPLGHDG 62
GA E G GE G PGL G DGIPG EGP + GVPG P P G G
Sbjct: 308 GAASEKGQNGEPGVPGLRGNDGIPGLEGP---------SGPKGDAGVPGYGRPGPQGEKG 358
Query: 63 -LPLPGCGWRPNKESV 77
+ L G P V
Sbjct: 359 DIGLTGVNGLPGLNGV 374
Score = 41.9 bits (94), Expect = 7e-06
Identities = 30/72 (41%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 1 MKGAQGEPGSKGERGDPGL-----PGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPG-LDA 54
M GA G PGSKG +GDPGL PG G PG GP + G+PG L
Sbjct: 82 MPGAPGLPGSKGVKGDPGLSMVGPPGPKGNPGLRGP---KGERGGMGDRGDPGLPGSLGY 138
Query: 55 PCPLGHDGLPLP 66
P G G P P
Sbjct: 139 PGEKGDLGTPGP 150
Score = 40.7 bits (91), Expect = 2e-05
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 3 GAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGLDA-PCPL--- 58
G +G G KG +G+PG G G+ G++G + ++GVPG P +
Sbjct: 415 GPRGYDGEKGFKGEPGRIGERGLMGEKGDMGLTGPVGLSGRKGDRGVPGSPGLPATVAAI 474
Query: 59 -GHDGLP-LPGCGWRPNKESVP 78
G G P PG RP K VP
Sbjct: 475 KGDKGEPGFPGAIGRPGKVGVP 496
Score = 38.7 bits (86), Expect = 7e-05
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Query: 8 PGSKGERGDPGLPGTDGIPGQEGPVXXXXXX---XXXXXXXEQGVPGLDAPC-PLGHDGL 63
PG GE+GD G G +G PG+ G G+PGL+ P P G G+
Sbjct: 286 PGMSGEKGDKGYTGPEGPPGEPGAASEKGQNGEPGVPGLRGNDGIPGLEGPSGPKGDAGV 345
Query: 64 P 64
P
Sbjct: 346 P 346
Score = 38.7 bits (86), Expect = 7e-05
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 3 GAQGEPGSKGERGDPGLPGTDGIPGQEG 30
G QGE G +G+ G G PG DG+PG +G
Sbjct: 591 GPQGEKGDRGDSGLMGRPGNDGLPGPQG 618
Score = 38.3 bits (85), Expect = 9e-05
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 3 GAQGEPGSKGERGDPGLPGTDGIPGQEG 30
G +GEPG KG G PG PG G+ G +G
Sbjct: 158 GPKGEPGPKGPAGHPGAPGRPGVDGVKG 185
Score = 38.3 bits (85), Expect = 9e-05
Identities = 28/82 (34%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
Query: 1 MKGAQGEPGSKGERGDPGLPGTDGI---PGQEGPVXXXXXXXXXXXXXEQGVPGLDAPCP 57
++G G PG GE+GD GLPG G+ PG++G G PG + P
Sbjct: 670 LEGVAGLPGMVGEKGDRGLPGMSGLNGAPGEKGQ-KGETPQLPPQRKGPPGPPGFNG--P 726
Query: 58 LGHDGLP-LPGCGWRPNKESVP 78
G GLP L G P P
Sbjct: 727 KGDKGLPGLAGPAGIPGAPGAP 748
Score = 37.9 bits (84), Expect = 1e-04
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 1 MKGAQGEPGSKGERGDPGLPGTDGIPGQEG 30
+ G +GE G+ G G PG PG DG+PG G
Sbjct: 58 LTGHRGEKGNSGPVGPPGAPGRDGMPGAPG 87
Score = 37.9 bits (84), Expect = 1e-04
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 11/64 (17%)
Query: 1 MKGAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGLDAPCPLGH 60
+KG +GEPG G G PG G G+ G+ G QG+PGL P P G
Sbjct: 474 IKGDKGEPGFPGAIGRPGKVGVPGLSGEAG---------AKGEMGIQGLPGL--PGPAGL 522
Query: 61 DGLP 64
+GLP
Sbjct: 523 NGLP 526
Score = 37.5 bits (83), Expect = 2e-04
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Query: 1 MKGAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGLDAPCPLGH 60
++G +G+ G GE+G G G G PG GPV G G P G
Sbjct: 22 IQGIRGDKGEMGEQGRTGAQGNAGPPGAPGPVGPRGLTGHRGEKGNSGPVG--PPGAPGR 79
Query: 61 DGLP-LPG 67
DG+P PG
Sbjct: 80 DGMPGAPG 87
Score = 37.1 bits (82), Expect = 2e-04
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 6/36 (16%)
Query: 3 GAQGEPGSKGERGDPGLPG------TDGIPGQEGPV 32
G G PG KG++G GLPG DG+PG GPV
Sbjct: 379 GVPGFPGVKGDKGTTGLPGIPGPPCVDGLPGAAGPV 414
Score = 37.1 bits (82), Expect = 2e-04
Identities = 15/30 (50%), Positives = 18/30 (60%)
Query: 1 MKGAQGEPGSKGERGDPGLPGTDGIPGQEG 30
+ G G G KG+RG PGL G G+PG G
Sbjct: 652 LNGLNGPQGMKGDRGMPGLEGVAGLPGMVG 681
Score = 36.7 bits (81), Expect = 3e-04
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 3 GAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXX--XXXXEQGVPGLDAPCPLGH 60
GA+GE G +G G PG G +G+PG +G + E+G+PG P G
Sbjct: 503 GAKGEMGIQGLPGLPGPAGLNGLPGMKGDMGPLGEKGDACPVVKGEKGLPG--RPGKTGR 560
Query: 61 DGLP 64
DG P
Sbjct: 561 DGPP 564
Score = 36.3 bits (80), Expect = 4e-04
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Query: 1 MKGAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGLDAPC-PLG 59
+ G G PG G +GD G+PG G+ G +G G+PG P P G
Sbjct: 362 LTGVNGLPGLNGVKGDMGVPGFPGVKGDKG---TTGLPGIPGPPCVDGLPGAAGPVGPRG 418
Query: 60 HDG 62
+DG
Sbjct: 419 YDG 421
Score = 35.9 bits (79), Expect = 5e-04
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 1 MKGAQGEPGSKGERGDPGLPGTDGIPGQEGP 31
++G QG G GE+GD G G G+ GQ GP
Sbjct: 234 VRGPQGVKGEPGEKGDRGEIGVKGLMGQSGP 264
Score = 35.9 bits (79), Expect = 5e-04
Identities = 27/77 (35%), Positives = 28/77 (36%), Gaps = 12/77 (15%)
Query: 2 KGAQGEPGSKGERGDPGLPGTDGIP-----------GQEGPVXXXXXXXXXXXXXEQGVP 50
KG G PG G G PGL G G P G GP+ G P
Sbjct: 549 KGLPGRPGKTGRDGPPGLTGEKGEPGLPVWKDRGPSGPSGPLGPQGEKGDRGDSGLMGRP 608
Query: 51 GLDA-PCPLGHDGLPLP 66
G D P P G GLP P
Sbjct: 609 GNDGLPGPQGQRGLPGP 625
Score = 35.9 bits (79), Expect = 5e-04
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Query: 1 MKGAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGLDAPCPL-G 59
+ G G G G +G GLPG G G +GP G+ GL+ P + G
Sbjct: 604 LMGRPGNDGLPGPQGQRGLPGPQGEKGDQGPPGFIGPKGDKGERDRDGLNGLNGPQGMKG 663
Query: 60 HDGLP 64
G+P
Sbjct: 664 DRGMP 668
Score = 35.9 bits (79), Expect = 5e-04
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 2 KGAQGEPGSKGERGDPGLPGTDGIPGQEGP 31
+GA+G G +G+ G G PG DG PG GP
Sbjct: 757 EGARGLQGLRGDVGPEGRPGRDGAPGLPGP 786
Score = 35.5 bits (78), Expect = 6e-04
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Query: 2 KGAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGLDAPCPLGHD 61
KG QG PG G +GD G DG+ G GP G+PG+ G
Sbjct: 629 KGDQGPPGFIGPKGDKGERDRDGLNGLNGPQGMKGDRGMPGLEGVAGLPGMVG--EKGDR 686
Query: 62 GLP-LPGCGWRPNKE 75
GLP + G P ++
Sbjct: 687 GLPGMSGLNGAPGEK 701
Score = 35.1 bits (77), Expect = 8e-04
Identities = 23/62 (37%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Query: 3 GAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGLDAPCPLGHDG 62
G QGE G G G GLPG +G+ G G G+PG PC DG
Sbjct: 352 GPQGEKGDIGLTGVNGLPGLNGVKGDMGVPGFPGVKGDKGTTGLPGIPG--PPCV---DG 406
Query: 63 LP 64
LP
Sbjct: 407 LP 408
Score = 34.7 bits (76), Expect = 0.001
Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 1/69 (1%)
Query: 1 MKGAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPG-LDAPCPLG 59
+KG QG G G G G+ G G+ G+ G + G PG + G
Sbjct: 216 LKGFQGRKGMMGAPGIQGVRGPQGVKGEPGEKGDRGEIGVKGLMGQSGPPGMIGLKGDKG 275
Query: 60 HDGLPLPGC 68
GLP P C
Sbjct: 276 LAGLPGPSC 284
Score = 34.7 bits (76), Expect = 0.001
Identities = 23/63 (36%), Positives = 25/63 (39%), Gaps = 5/63 (7%)
Query: 2 KGAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGLDAPCPLGHD 61
KG G PG G G G G G EGP E GVPGL G+D
Sbjct: 274 KGLAGLPGPSCLPGMSGEKGDKGYTGPEGPPGEPGAASEKGQNGEPGVPGL-----RGND 328
Query: 62 GLP 64
G+P
Sbjct: 329 GIP 331
Score = 34.3 bits (75), Expect = 0.001
Identities = 14/28 (50%), Positives = 16/28 (57%)
Query: 3 GAQGEPGSKGERGDPGLPGTDGIPGQEG 30
G G PG G G PGLPG+ G+ G G
Sbjct: 72 GPPGAPGRDGMPGAPGLPGSKGVKGDPG 99
Score = 34.3 bits (75), Expect = 0.001
Identities = 25/72 (34%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Query: 2 KGAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGLD-APCPLGH 60
KG +G PG G G PG PG G G G +G PG D AP G
Sbjct: 727 KGDKGLPGLAGPAGIPGAPGAPGEMGLRGFEGARGLQGLRGDVGPEGRPGRDGAPGLPGP 786
Query: 61 DGLPLPGCGWRP 72
G P C P
Sbjct: 787 KGEPGRDCEAAP 798
Score = 33.9 bits (74), Expect = 0.002
Identities = 14/28 (50%), Positives = 17/28 (60%)
Query: 3 GAQGEPGSKGERGDPGLPGTDGIPGQEG 30
G G G G +GD G PG G+PGQ+G
Sbjct: 179 GVDGVKGLPGLKGDIGAPGVIGLPGQKG 206
Score = 33.9 bits (74), Expect = 0.002
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 9/81 (11%)
Query: 2 KGAQGEPGSKGERGDPGLPGT------DGIPGQEGPVXXXXXXXXXXXXXEQGVPGLDAP 55
KG G PG G +GD GLPG G PG G + +G G +
Sbjct: 715 KGPPGPPGFNGPKGDKGLPGLAGPAGIPGAPGAPGEMGLRGFEGARGLQGLRGDVGPEGR 774
Query: 56 CPLGHDGLP-LPGCGWRPNKE 75
P G DG P LPG P ++
Sbjct: 775 -P-GRDGAPGLPGPKGEPGRD 793
Score = 33.5 bits (73), Expect = 0.003
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 2 KGAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGLDAP 55
KG G G G G G+PG G+PG +G V +G PGL P
Sbjct: 65 KGNSGPVGPPGAPGRDGMPGAPGLPGSKG-VKGDPGLSMVGPPGPKGNPGLRGP 117
Score = 33.5 bits (73), Expect = 0.003
Identities = 20/63 (31%), Positives = 24/63 (38%)
Query: 3 GAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGLDAPCPLGHDG 62
GA G PG G RG G G G+ G GP +G PG D + G
Sbjct: 743 GAPGAPGEMGLRGFEGARGLQGLRGDVGPEGRPGRDGAPGLPGPKGEPGRDCEAAPYYTG 802
Query: 63 LPL 65
+ L
Sbjct: 803 ILL 805
Score = 33.1 bits (72), Expect = 0.003
Identities = 23/78 (29%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
Query: 2 KGAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGLDAPC-PLGH 60
KGA G G +G++G+ G G G G GP +G G P P G
Sbjct: 17 KGAPGIQGIRGDKGEMGEQGRTGAQGNAGPPGAPGPVGPRGLTGHRGEKGNSGPVGPPGA 76
Query: 61 DGLP-LPGCGWRPNKESV 77
G +PG P + V
Sbjct: 77 PGRDGMPGAPGLPGSKGV 94
Score = 32.3 bits (70), Expect = 0.006
Identities = 15/28 (53%), Positives = 16/28 (57%)
Query: 3 GAQGEPGSKGERGDPGLPGTDGIPGQEG 30
GA G PG G +G PGL G G PG G
Sbjct: 173 GAPGRPGVDGVKGLPGLKGDIGAPGVIG 200
Score = 31.9 bits (69), Expect = 0.008
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Query: 9 GSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGLDAPCPL-GHDG 62
G +G +G+ G PG GI G +G + G PG P L GH G
Sbjct: 9 GPQGLQGEKGAPGIQGIRGDKGEMGEQGRTGAQGNAGPPGAPGPVGPRGLTGHRG 63
Score = 31.9 bits (69), Expect = 0.008
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 1 MKGAQGEPGSKGERGDPGLPGTDGIPGQE 29
++G G G G G PGLPG G PG++
Sbjct: 765 LRGDVGPEGRPGRDGAPGLPGPKGEPGRD 793
Score = 31.5 bits (68), Expect = 0.010
Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Query: 3 GAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGLD-APCPLGHD 61
G +G PG KG+ G PG+ G G G G G PG+ P G
Sbjct: 182 GVKGLPGLKGDIGAPGVIGLPGQKGDMGQAGNDGLKGFQGRKGMMGAPGIQGVRGPQGVK 241
Query: 62 GLP 64
G P
Sbjct: 242 GEP 244
Score = 31.5 bits (68), Expect = 0.010
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Query: 2 KGAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGLDAP-CPLGH 60
KG +GE G KG G G PG G+ G +G E+G G P P G
Sbjct: 247 KGDRGEIGVKGLMGQSGPPGMIGLKGDKGLAGLPGPSCLPGMSGEKGDKGYTGPEGPPGE 306
Query: 61 DG 62
G
Sbjct: 307 PG 308
Score = 31.1 bits (67), Expect = 0.013
Identities = 16/50 (32%), Positives = 20/50 (40%)
Query: 3 GAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGL 52
G G PG G +G+PG G G PG G + G PG+
Sbjct: 149 GPPGYPGDVGPKGEPGPKGPAGHPGAPGRPGVDGVKGLPGLKGDIGAPGV 198
Score = 31.1 bits (67), Expect = 0.013
Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 6/73 (8%)
Query: 1 MKGAQGEPGSKGERGDPGLPGTDG-IPGQEGPVXXXXXXXXXXXXXEQGVPGLD----AP 55
+ G G G KG+RG PG PG + +G + GVPGL A
Sbjct: 446 LTGPVGLSGRKGDRGVPGSPGLPATVAAIKGDKGEPGFPGAIGRPGKVGVPGLSGEAGAK 505
Query: 56 CPLGHDGLP-LPG 67
+G GLP LPG
Sbjct: 506 GEMGIQGLPGLPG 518
Score = 30.7 bits (66), Expect = 0.018
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 1 MKGAQGEPGSKGERGDPGLPGTDGIPGQEG 30
++G +G PG +G RGD G G G G +G
Sbjct: 13 LQGEKGAPGIQGIRGDKGEMGEQGRTGAQG 42
Score = 29.1 bits (62), Expect = 0.054
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Query: 2 KGAQGEPGS---KGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGL 52
KG G+ G+ KG +G G+ G GI G GP E GV GL
Sbjct: 205 KGDMGQAGNDGLKGFQGRKGMMGAPGIQGVRGPQGVKGEPGEKGDRGEIGVKGL 258
Score = 27.1 bits (57), Expect = 0.22
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 3 GAQGE--PGSKGERGDPGLPGTDGIPGQEG 30
G +G+ P KGE+G PG PG G G G
Sbjct: 536 GEKGDACPVVKGEKGLPGRPGKTGRDGPPG 565
Score = 26.2 bits (55), Expect = 0.38
Identities = 13/30 (43%), Positives = 14/30 (46%)
Query: 3 GAQGEPGSKGERGDPGLPGTDGIPGQEGPV 32
G G PG G G GLPG G G G +
Sbjct: 170 GHPGAPGRPGVDGVKGLPGLKGDIGAPGVI 199
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 43.6 bits (98), Expect = 2e-06
Identities = 26/69 (37%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 2 KGAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGLDAPCPLGHD 61
KG +G+ G KG +G PG PG +G+PG +G +G PG P P G
Sbjct: 437 KGERGQMGPKGGQGVPGRPGPEGMPGDKGDKGESGSVGMPGPQGPRGYPG--QPGPEGLR 494
Query: 62 GLP-LPGCG 69
G P PG G
Sbjct: 495 GEPGQPGYG 503
Score = 43.2 bits (97), Expect = 3e-06
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 1 MKGAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGLDA-PCPLG 59
++G +G+ G G G PG+PGT+G+PG G G+ GL P P G
Sbjct: 143 LQGPKGDRGRDGLPGYPGIPGTNGVPGVPGAPGLAGRDGCNGTDGLPGLSGLPGNPGPRG 202
Query: 60 HDGLP 64
+ G+P
Sbjct: 203 YAGIP 207
Score = 43.2 bits (97), Expect = 3e-06
Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Query: 2 KGAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGLDAPCPLGHD 61
KG G G KGERG G G G+PG+ GP G+PG P G+
Sbjct: 428 KGMDGFDGEKGERGQMGPKGGQGVPGRPGPEGMPGDKGDKGESGSVGMPGPQG--PRGYP 485
Query: 62 GLPLP 66
G P P
Sbjct: 486 GQPGP 490
Score = 42.7 bits (96), Expect = 4e-06
Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 1 MKGAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGLD-APCPLG 59
+K +G+ G KGE G G+ G G PG GP G G+D AP G
Sbjct: 659 LKPIKGDKGEKGENGLMGIKGEKGFPGPVGPEGKMGLRGMKGDKGRPGEAGIDGAPGAPG 718
Query: 60 HDGLP 64
DGLP
Sbjct: 719 KDGLP 723
Score = 42.7 bits (96), Expect = 4e-06
Identities = 17/30 (56%), Positives = 20/30 (66%)
Query: 1 MKGAQGEPGSKGERGDPGLPGTDGIPGQEG 30
MKG +G PG G G PG PG DG+PG+ G
Sbjct: 698 MKGDKGRPGEAGIDGAPGAPGKDGLPGRHG 727
Score = 42.3 bits (95), Expect = 5e-06
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 12/80 (15%)
Query: 3 GAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGL-DAPCPLGHD 61
G +G+ G +G G+PG PG G+PG+ G E G PGL P P G
Sbjct: 586 GMKGDKGERGYAGEPGRPGASGVPGERG---------YPGMPGEDGTPGLRGEPGPKGEP 636
Query: 62 G-LPLPGCGWRPNKES-VPL 79
G L PG P +++ +P+
Sbjct: 637 GLLGPPGPSGEPGRDAEIPM 656
Score = 41.1 bits (92), Expect = 1e-05
Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 2 KGAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGLDAP-CPLGH 60
+G GE G KGE+G PG PG G G GPV G+ G P G
Sbjct: 328 RGQVGERGHKGEKGLPGQPGPRGRDGNFGPVGLPGQKGDRGSEGLHGLKGQSGPKGEPGR 387
Query: 61 DGLP 64
DG+P
Sbjct: 388 DGIP 391
Score = 40.7 bits (91), Expect = 2e-05
Identities = 24/63 (38%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Query: 2 KGAQGEPGS------KGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGLDAP 55
+G GEPG GERG PG+PG DG PG G G PG DA
Sbjct: 594 RGYAGEPGRPGASGVPGERGYPGMPGEDGTPGLRGEPGPKGEPGLLGPPGPSGEPGRDAE 653
Query: 56 CPL 58
P+
Sbjct: 654 IPM 656
Score = 40.3 bits (90), Expect = 2e-05
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 3 GAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGLDAPCPLGHDG 62
G G KGE+GD G PG G G++G E+G+PG P P G DG
Sbjct: 296 GTTTTTGPKGEKGDRGEPGEPGRSGEKGQAGDRGQVGERGHKGEKGLPG--QPGPRGRDG 353
Score = 38.7 bits (86), Expect = 7e-05
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 2 KGAQGEPGSKGERGDPGLPGTDGIPGQEG 30
+G++G G KG+ G G PG DGIPGQ G
Sbjct: 367 RGSEGLHGLKGQSGPKGEPGRDGIPGQPG 395
Score = 37.9 bits (84), Expect = 1e-04
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 3 GAQGEPGSKGERGDPGLPGTDGIPGQEG 30
GA G PG GE+G+PG PG G G+ G
Sbjct: 544 GAPGLPGRDGEKGEPGRPGLPGAKGERG 571
Score = 37.1 bits (82), Expect = 2e-04
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 2 KGAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGLDA-PCPLGH 60
+G G G KG +G G PG++G+PG++G ++G GL P G
Sbjct: 105 RGLPGPMGLKGAKGVRGFPGSEGLPGEKGTKGEPGPVGLQGPKGDRGRDGLPGYPGIPGT 164
Query: 61 DGLP-LPG 67
+G+P +PG
Sbjct: 165 NGVPGVPG 172
Score = 37.1 bits (82), Expect = 2e-04
Identities = 28/80 (35%), Positives = 34/80 (42%), Gaps = 6/80 (7%)
Query: 3 GAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGLDA----PCPL 58
G G PG G G+PG G GIPG +G ++G PG D P P
Sbjct: 184 GTDGLPGLSGLPGNPGPRGYAGIPGTKGEKGEPARHPENYNKGQKGEPGNDGLEGLPGPQ 243
Query: 59 GHDGLPLPGCGWRPNKESVP 78
G G P G RP ++ VP
Sbjct: 244 GEVG-P-RGFPGRPGEKGVP 261
Score = 36.7 bits (81), Expect = 3e-04
Identities = 27/75 (36%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
Query: 1 MKGAQGEPGSKGERGDP---GLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGLDAPCP 57
+ G G G+KG RG P GLPG G G+ GPV G PG+ P
Sbjct: 107 LPGPMGLKGAKGVRGFPGSEGLPGEKGTKGEPGPVGLQGPKGDRGRDGLPGYPGI--PGT 164
Query: 58 LGHDGLP-LPGCGWR 71
G G+P PG R
Sbjct: 165 NGVPGVPGAPGLAGR 179
Score = 36.7 bits (81), Expect = 3e-04
Identities = 19/50 (38%), Positives = 24/50 (48%)
Query: 3 GAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGL 52
G +GEPG KGE G G PG G PG++ + E+G GL
Sbjct: 625 GLRGEPGPKGEPGLLGPPGPSGEPGRDAEIPMDQLKPIKGDKGEKGENGL 674
Score = 36.3 bits (80), Expect = 4e-04
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 9/56 (16%)
Query: 2 KGAQGEPG------SKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPG 51
KG +GEP +KG++G+PG G +G+PG +G V E+GVPG
Sbjct: 210 KGEKGEPARHPENYNKGQKGEPGNDGLEGLPGPQGEV---GPRGFPGRPGEKGVPG 262
Score = 35.5 bits (78), Expect = 6e-04
Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 13/70 (18%)
Query: 2 KGAQGEPGSKGERGDPGLPGTDG---IPGQEGPVXXXXXXXXXXXXXEQGVPGLDAPCPL 58
+G G+ G KGE G G+PG G PGQ GP E G PG P
Sbjct: 458 EGMPGDKGDKGESGSVGMPGPQGPRGYPGQPGP---------EGLRGEPGQPGYGIPGQK 508
Query: 59 GHDGLP-LPG 67
G+ G+ PG
Sbjct: 509 GNAGMAGFPG 518
Score = 35.1 bits (77), Expect = 8e-04
Identities = 23/63 (36%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Query: 1 MKGAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPG-LDAPCPLG 59
MKG +GE G GE G PG G G G G +G PG L P P G
Sbjct: 587 MKGDKGERGYAGEPGRPGASGVPGERGYPGMPGEDGTPGLRGEPGPKGEPGLLGPPGPSG 646
Query: 60 HDG 62
G
Sbjct: 647 EPG 649
Score = 34.7 bits (76), Expect = 0.001
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 1 MKGAQGEPGSKGERGDPGLPGTDGIPGQEG 30
++G G G G RG PG PG G+PG G
Sbjct: 236 LEGLPGPQGEVGPRGFPGRPGEKGVPGTPG 265
Score = 33.9 bits (74), Expect = 0.002
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 1 MKGAQGEPGSKGERGDPGLPGTDGIPGQEG 30
+ G +G+ G KGE G G+PG GI G G
Sbjct: 372 LHGLKGQSGPKGEPGRDGIPGQPGIAGPAG 401
Score = 33.9 bits (74), Expect = 0.002
Identities = 15/28 (53%), Positives = 16/28 (57%)
Query: 3 GAQGEPGSKGERGDPGLPGTDGIPGQEG 30
G G G KGE G PGLPG G G +G
Sbjct: 547 GLPGRDGEKGEPGRPGLPGAKGERGLKG 574
Score = 33.5 bits (73), Expect = 0.003
Identities = 14/28 (50%), Positives = 17/28 (60%)
Query: 3 GAQGEPGSKGERGDPGLPGTDGIPGQEG 30
G +G PG GE+G PG PG G G +G
Sbjct: 247 GPRGFPGRPGEKGVPGTPGVRGERGDKG 274
Score = 33.1 bits (72), Expect = 0.003
Identities = 23/63 (36%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 3 GAQGEPGSKGERGDPGLPGTDGIPG--QEGPVXXXXXXXXXXXXXEQGVPGLDAPCPLGH 60
G G PG KG++G+ G G G PG +EG E G PGL P G
Sbjct: 512 GMAGFPGLKGQKGERGFKGVMGTPGDAKEGRPGAPGLPGRDGEKGEPGRPGL--PGAKGE 569
Query: 61 DGL 63
GL
Sbjct: 570 RGL 572
Score = 32.3 bits (70), Expect = 0.006
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 3 GAQGEPGSKGERGDPGLPGTDGIPG 27
G +GEPG G G PG+ G G PG
Sbjct: 380 GPKGEPGRDGIPGQPGIAGPAGAPG 404
Score = 31.9 bits (69), Expect = 0.008
Identities = 26/74 (35%), Positives = 30/74 (40%), Gaps = 6/74 (8%)
Query: 2 KGAQGEPGSKGERGD---PGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGLDAPCPL 58
KG G+PG +G G+ GLPG G G EG G+PG P
Sbjct: 340 KGLPGQPGPRGRDGNFGPVGLPGQKGDRGSEGLHGLKGQSGPKGEPGRDGIPG--QPGIA 397
Query: 59 GHDGLPLPGCGWRP 72
G G P G G RP
Sbjct: 398 GPAGAPGGGEG-RP 410
Score = 31.9 bits (69), Expect = 0.008
Identities = 26/76 (34%), Positives = 29/76 (38%), Gaps = 12/76 (15%)
Query: 3 GAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPGLDAPCPLGHDG 62
G G PG G G PG PG G G EGP E+G G P G G
Sbjct: 398 GPAGAPG--GGEGRPGAPGPKGPRGYEGPQGPKGMDGFDGEKGERGQMG-----PKGGQG 450
Query: 63 LPLPGCGWRPNKESVP 78
+P RP E +P
Sbjct: 451 VP-----GRPGPEGMP 461
Score = 31.5 bits (68), Expect = 0.010
Identities = 14/30 (46%), Positives = 16/30 (53%)
Query: 1 MKGAQGEPGSKGERGDPGLPGTDGIPGQEG 30
+ G QGE G +G G PG G G PG G
Sbjct: 239 LPGPQGEVGPRGFPGRPGEKGVPGTPGVRG 268
Score = 31.1 bits (67), Expect = 0.013
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 2 KGAQGEPGSKGERGDPG--LPGTDGIPGQEG 30
KG G PG +GERGD G + G G G +G
Sbjct: 258 KGVPGTPGVRGERGDKGVCIKGEKGQKGAKG 288
Score = 30.3 bits (65), Expect = 0.023
Identities = 23/65 (35%), Positives = 25/65 (38%), Gaps = 5/65 (7%)
Query: 6 GEPGSKGERGDPGLPGTDGIPGQEG--PVXXXXXXXXXXXXXEQGVPGLDAPCPLGHDGL 63
G PG KG G G PG G G+ G V G+PG D G G
Sbjct: 503 GIPGQKGNAGMAGFPGLKGQKGERGFKGVMGTPGDAKEGRPGAPGLPGRDG--EKGEPGR 560
Query: 64 P-LPG 67
P LPG
Sbjct: 561 PGLPG 565
Score = 28.7 bits (61), Expect = 0.071
Identities = 13/30 (43%), Positives = 14/30 (46%)
Query: 1 MKGAQGEPGSKGERGDPGLPGTDGIPGQEG 30
+KG G G G G PG PG G G G
Sbjct: 375 LKGQSGPKGEPGRDGIPGQPGIAGPAGAPG 404
Score = 28.3 bits (60), Expect = 0.094
Identities = 24/79 (30%), Positives = 30/79 (37%), Gaps = 8/79 (10%)
Query: 8 PGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVP---GLDAP-CPLGHDGL 63
P E+G+ GLPG G+ G +G +G P GL P G DGL
Sbjct: 96 PKCFAEKGNRGLPGPMGLKGAKGVRGFPGSEGLPGEKGTKGEPGPVGLQGPKGDRGRDGL 155
Query: 64 P----LPGCGWRPNKESVP 78
P +PG P P
Sbjct: 156 PGYPGIPGTNGVPGVPGAP 174
Score = 28.3 bits (60), Expect = 0.094
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 3 GAQGEPGSKGERGDPGLPGTDGIPGQ 28
G +G G G++GD G G G PG+
Sbjct: 735 GLKGNVGYSGDKGDKGYSGLKGEPGR 760
Score = 27.9 bits (59), Expect = 0.12
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 2 KGAQGEPGSKGERGDPGLPGTDGIPG 27
+G G PG KG G PG+ G G G
Sbjct: 249 RGFPGRPGEKGVPGTPGVRGERGDKG 274
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 5 QGEPGSKGERGDPGLPGTDGIPGQEG 30
+G G +GE+G PG+ G G G+ G
Sbjct: 773 RGPQGLQGEKGAPGIQGIRGDKGEMG 798
Score = 27.1 bits (57), Expect = 0.22
Identities = 15/51 (29%), Positives = 20/51 (39%)
Query: 1 MKGAQGEPGSKGERGDPGLPGTDGIPGQEGPVXXXXXXXXXXXXXEQGVPG 51
+KG G G+ G GD G G G+ G+ G QG+ G
Sbjct: 730 VKGEPGLKGNVGYSGDKGDKGYSGLKGEPGRCASIPPNLEEAIRGPQGLQG 780
Score = 27.1 bits (57), Expect = 0.22
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 1 MKGAQGEPGSKGERGDPGLPGTDG 24
++G +G PG +G RGD G G G
Sbjct: 778 LQGEKGAPGIQGIRGDKGEMGEQG 801
>DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2
protein.
Length = 961
Score = 23.0 bits (47), Expect = 3.5
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 2 KGAQGEPGSKGERGDPGLP 20
+ A G GS G+RG+ G+P
Sbjct: 579 RSALGGNGSGGDRGNAGVP 597
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.311 0.143 0.475
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,778
Number of Sequences: 2123
Number of extensions: 3600
Number of successful extensions: 274
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 116
length of query: 135
length of database: 516,269
effective HSP length: 58
effective length of query: 77
effective length of database: 393,135
effective search space: 30271395
effective search space used: 30271395
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 44 (21.8 bits)
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