Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002743-TA|BGIBMGA002743-PA|undefined
         (135 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC007724-1|AAH07724.2|  273|Homo sapiens BCL2L12 protein protein.      29   5.2  
BC024651-1|AAH24651.1|   72|Homo sapiens Unknown (protein for MG...    29   6.8  
AF010144-1|AAC08737.1|  375|Homo sapiens neuronal thread protein...    28   9.0  

>BC007724-1|AAH07724.2|  273|Homo sapiens BCL2L12 protein protein.
          Length = 273

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 17/57 (29%), Positives = 28/57 (49%)

Query: 41  LFDVFCLRDDAATLRRGGPQLSPTQRRFLGRTPMCIAVIVRLSGPRVSLSAGGGNHV 97
           L ++FC RDD++   R  P  SP     L R  + + +  R++G   +L+     HV
Sbjct: 188 LVELFCSRDDSSRPSRACPGPSPPSPEPLARLALAMELSRRVAGLGGTLAGLSVEHV 244


>BC024651-1|AAH24651.1|   72|Homo sapiens Unknown (protein for
          MGC:25116) protein.
          Length = 72

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 19 PPVMSLITCTGVPGVYGYRKP 39
          PP     +C  +PG +GYR+P
Sbjct: 23 PPGFKRFSCLSLPGTWGYRRP 43


>AF010144-1|AAC08737.1|  375|Homo sapiens neuronal thread protein
           AD7c-NTP protein.
          Length = 375

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%)

Query: 20  PVMSLITCTGVPGVYGYRK---PGLFDVFCLRDDAATL 54
           P +   TC  +P  + YR+   PGLF +F LR    TL
Sbjct: 114 PELKQSTCLSLPKCWDYRRAAVPGLFILFFLRHRCPTL 151


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.325    0.141    0.437 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,684,247
Number of Sequences: 224733
Number of extensions: 883959
Number of successful extensions: 1520
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1518
Number of HSP's gapped (non-prelim): 4
length of query: 135
length of database: 73,234,838
effective HSP length: 82
effective length of query: 53
effective length of database: 54,806,732
effective search space: 2904756796
effective search space used: 2904756796
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 60 (28.3 bits)