GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002743-TA|BGIBMGA002743-PA|undefined
         (135 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    24   0.55 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    24   0.55 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   3.0  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   3.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   3.9  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    20   9.0  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    20   9.0  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    20   9.0  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 0.55
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 116 YFKKEIYTSVAPACALCT 133
           +F  E+YT +  AC +CT
Sbjct: 124 HFTLELYTVLGAACQVCT 141


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.8 bits (49), Expect = 0.55
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 116 YFKKEIYTSVAPACALCT 133
           +F  E+YT +  AC +CT
Sbjct: 124 HFTLELYTVLGAACQVCT 141


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)

Query: 121 IYTSVAPACALCTL 134
           IYTS+ P  A+C L
Sbjct: 21  IYTSMKPVYAICKL 34


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 3.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)

Query: 121 IYTSVAPACALCTL 134
           IYTS+ P  A+C L
Sbjct: 21  IYTSMKPVYAICKL 34


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 3.9
 Identities = 9/30 (30%), Positives = 13/30 (43%)

Query: 10  VAPRRRYREPPVMSLITCTGVPGVYGYRKP 39
           V PR+         ++   G P +Y  RKP
Sbjct: 825 VVPRKEIPAKSAEQILAEGGCPNLYDARKP 854


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 11/43 (25%), Positives = 17/43 (39%)

Query: 69  LGRTPMCIAVIVRLSGPRVSLSAGGGNHVVTSVSLADRSCGLD 111
           + RTP+  +  +    P  +L A           L+D  C LD
Sbjct: 14  MARTPLKSSFSISSILPETALEAPKSPENHPETELSDSDCDLD 56


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 6/13 (46%), Positives = 10/13 (76%)

Query: 111 DDLRKYFKKEIYT 123
           DDL +YF+ ++ T
Sbjct: 221 DDLNRYFEVQVLT 233


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 19.8 bits (39), Expect = 9.0
 Identities = 6/13 (46%), Positives = 10/13 (76%)

Query: 111 DDLRKYFKKEIYT 123
           DDL +YF+ ++ T
Sbjct: 217 DDLNRYFEVQVLT 229


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.325    0.141    0.437 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,595
Number of Sequences: 317
Number of extensions: 1177
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 135
length of database: 114,650
effective HSP length: 51
effective length of query: 84
effective length of database: 98,483
effective search space:  8272572
effective search space used:  8272572
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.1 bits)
S2: 39 (19.8 bits)