GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002743-TA|BGIBMGA002743-PA|undefined
         (135 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domai...    25   1.2  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    23   4.7  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    23   4.7  

>DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query: 97  VVTSVSLADRSCGLDDLRKYFKKEIYTSVAPAC 129
           VVT +    R  G D +  Y   E+Y    PAC
Sbjct: 42  VVTIIVFLSRLKGPDTIVCYDPNEVYDDCGPAC 74


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)

Query: 116 YFKKEIYTSVAPACALCT 133
           +F  E YT +  AC +CT
Sbjct: 167 HFTVEYYTVLGAACQVCT 184


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)

Query: 116 YFKKEIYTSVAPACALCT 133
           +F  E YT +  AC +CT
Sbjct: 167 HFTVEYYTVLGAACQVCT 184


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.325    0.141    0.437 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,322
Number of Sequences: 2123
Number of extensions: 6106
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 3
length of query: 135
length of database: 516,269
effective HSP length: 58
effective length of query: 77
effective length of database: 393,135
effective search space: 30271395
effective search space used: 30271395
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 44 (21.8 bits)