Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002740-TA|BGIBMGA002740-PA|undefined
(132 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ356012-1|ABC86955.1| 818|Homo sapiens ZNF438 transcript varia... 28 8.5
DQ356011-1|ABC86954.1| 818|Homo sapiens ZNF438 transcript varia... 28 8.5
BC104757-1|AAI04758.1| 828|Homo sapiens zinc finger protein 438... 28 8.5
BC101622-1|AAI01623.1| 828|Homo sapiens ZNF438 transcript varia... 28 8.5
AL359532-3|CAM17193.1| 828|Homo sapiens zinc finger protein 438... 28 8.5
AL359532-2|CAI13438.1| 818|Homo sapiens zinc finger protein 438... 28 8.5
AK131357-1|BAD18510.1| 779|Homo sapiens protein ( Homo sapiens ... 28 8.5
AF428258-1|AAP97298.1| 828|Homo sapiens hypothetical protein pr... 28 8.5
AF417165-1|AAL11910.1| 610|Homo sapiens cytosolic nucleotidase ... 28 8.5
>DQ356012-1|ABC86955.1| 818|Homo sapiens ZNF438 transcript variant
3 protein.
Length = 818
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 54 MSLISSGYSLYKQQGLQDRLSLLEEQHLALRSAVLEPQQPLVERLRREALSRPLYWRPRR 113
+ + + Y+L + G + SL+ H+A + +P+ L E L+ L P Y PR
Sbjct: 63 LGMSTQNYALMQVAGQEGTFSLVALPHVASAQPIQKPRMSLPENLK---LPIPRYQPPRN 119
Query: 114 S 114
S
Sbjct: 120 S 120
>DQ356011-1|ABC86954.1| 818|Homo sapiens ZNF438 transcript variant
2 protein.
Length = 818
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 54 MSLISSGYSLYKQQGLQDRLSLLEEQHLALRSAVLEPQQPLVERLRREALSRPLYWRPRR 113
+ + + Y+L + G + SL+ H+A + +P+ L E L+ L P Y PR
Sbjct: 63 LGMSTQNYALMQVAGQEGTFSLVALPHVASAQPIQKPRMSLPENLK---LPIPRYQPPRN 119
Query: 114 S 114
S
Sbjct: 120 S 120
>BC104757-1|AAI04758.1| 828|Homo sapiens zinc finger protein 438
protein.
Length = 828
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 54 MSLISSGYSLYKQQGLQDRLSLLEEQHLALRSAVLEPQQPLVERLRREALSRPLYWRPRR 113
+ + + Y+L + G + SL+ H+A + +P+ L E L+ L P Y PR
Sbjct: 73 LGMSTQNYALMQVAGQEGTFSLVALPHVASAQPIQKPRMSLPENLK---LPIPRYQPPRN 129
Query: 114 S 114
S
Sbjct: 130 S 130
>BC101622-1|AAI01623.1| 828|Homo sapiens ZNF438 transcript variant
3 protein.
Length = 828
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 54 MSLISSGYSLYKQQGLQDRLSLLEEQHLALRSAVLEPQQPLVERLRREALSRPLYWRPRR 113
+ + + Y+L + G + SL+ H+A + +P+ L E L+ L P Y PR
Sbjct: 73 LGMSTQNYALMQVAGQEGTFSLVALPHVASAQPIQKPRMSLPENLK---LPIPRYQPPRN 129
Query: 114 S 114
S
Sbjct: 130 S 130
>AL359532-3|CAM17193.1| 828|Homo sapiens zinc finger protein 438
protein.
Length = 828
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 54 MSLISSGYSLYKQQGLQDRLSLLEEQHLALRSAVLEPQQPLVERLRREALSRPLYWRPRR 113
+ + + Y+L + G + SL+ H+A + +P+ L E L+ L P Y PR
Sbjct: 73 LGMSTQNYALMQVAGQEGTFSLVALPHVASAQPIQKPRMSLPENLK---LPIPRYQPPRN 129
Query: 114 S 114
S
Sbjct: 130 S 130
>AL359532-2|CAI13438.1| 818|Homo sapiens zinc finger protein 438
protein.
Length = 818
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 54 MSLISSGYSLYKQQGLQDRLSLLEEQHLALRSAVLEPQQPLVERLRREALSRPLYWRPRR 113
+ + + Y+L + G + SL+ H+A + +P+ L E L+ L P Y PR
Sbjct: 63 LGMSTQNYALMQVAGQEGTFSLVALPHVASAQPIQKPRMSLPENLK---LPIPRYQPPRN 119
Query: 114 S 114
S
Sbjct: 120 S 120
>AK131357-1|BAD18510.1| 779|Homo sapiens protein ( Homo sapiens
cDNA FLJ16387 fis, clone TRACH2007483, weakly similar
to GASTRULA ZINC FINGER PROTEIN XLCGF7.1. ).
Length = 779
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 54 MSLISSGYSLYKQQGLQDRLSLLEEQHLALRSAVLEPQQPLVERLRREALSRPLYWRPRR 113
+ + + Y+L + G + SL+ H+A + +P+ L E L+ L P Y PR
Sbjct: 24 LGMSTQNYALMQVAGQEGTFSLVALPHVASAQPIQKPRMSLPENLK---LPIPRYQPPRN 80
Query: 114 S 114
S
Sbjct: 81 S 81
>AF428258-1|AAP97298.1| 828|Homo sapiens hypothetical protein
protein.
Length = 828
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 54 MSLISSGYSLYKQQGLQDRLSLLEEQHLALRSAVLEPQQPLVERLRREALSRPLYWRPRR 113
+ + + Y+L + G + SL+ H+A + +P+ L E L+ L P Y PR
Sbjct: 73 LGMSTQNYALMQVAGQEGTFSLVALPHVASAQPIQKPRMSLPENLK---LPIPRYQPPRN 129
Query: 114 S 114
S
Sbjct: 130 S 130
>AF417165-1|AAL11910.1| 610|Homo sapiens cytosolic nucleotidase Ib
alpha protein.
Length = 610
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 30 NERCDEKCPSDPWAYCVVLWCACAMSLISSGYSLYKQQGLQDRLSLLEEQHLALRSAVLE 89
N C P P + +CA+ + G +Y+Q+GL+ + E L + +L
Sbjct: 293 NPSCSRPWPPKPKNAITIALSSCALFNMVDGRKIYEQEGLEKYM----EYQLTNENVILT 348
Query: 90 PQQ 92
P Q
Sbjct: 349 PGQ 351
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.323 0.137 0.449
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,630,521
Number of Sequences: 224733
Number of extensions: 621415
Number of successful extensions: 1474
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1474
Number of HSP's gapped (non-prelim): 9
length of query: 132
length of database: 73,234,838
effective HSP length: 82
effective length of query: 50
effective length of database: 54,806,732
effective search space: 2740336600
effective search space used: 2740336600
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 60 (28.3 bits)
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