GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002740-TA|BGIBMGA002740-PA|undefined
         (132 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B4B1B Cluster: PREDICTED: similar to LP07855p; ...    36   0.35 
UniRef50_A4M189 Cluster: Putative uncharacterized protein; n=1; ...    34   0.80 
UniRef50_Q4D9W4 Cluster: Putative uncharacterized protein; n=2; ...    34   1.1  
UniRef50_Q15KG7 Cluster: Interleukin-15; n=3; Danio rerio|Rep: I...    33   1.9  
UniRef50_A3CFB9 Cluster: Putative uncharacterized protein; n=1; ...    33   2.4  
UniRef50_Q08QB4 Cluster: Tetratricopeptide repeat family; n=17; ...    32   3.2  
UniRef50_A0LU43 Cluster: Peptidase M50; n=1; Acidothermus cellul...    32   3.2  
UniRef50_Q0IQJ5 Cluster: Os12g0117500 protein; n=1; Oryza sativa...    32   3.2  
UniRef50_Q294J2 Cluster: GA17207-PA; n=1; Drosophila pseudoobscu...    31   7.5  
UniRef50_UPI0000ECD699 Cluster: ADP-ribosylation factor-like pro...    31   9.9  

>UniRef50_UPI00015B4B1B Cluster: PREDICTED: similar to LP07855p;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           LP07855p - Nasonia vitripennis
          Length = 554

 Score = 35.5 bits (78), Expect = 0.35
 Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 20/99 (20%)

Query: 42  WAYCVVLWCACAMSLISSGYSLYKQQGLQDRLSLLEEQ-HLALRSAVLEPQQP---LVER 97
           W  CV+    C  SL+ SG   Y++  L++R+S LE    L  +    + Q P   ++ER
Sbjct: 39  WTMCVL----CMSSLVVSGLLAYRELRLEERISALENLCQLPGQYQQQQQQNPSDVIIER 94

Query: 98  LRREA------LSRPLYWRPR------RSIRDYGDCGCP 124
           L+RE       + + L   P       R  RD  DC CP
Sbjct: 95  LKRELQQQIDDVQKKLALAPEGPTGIFRLKRDVADCNCP 133


>UniRef50_A4M189 Cluster: Putative uncharacterized protein; n=1;
           Geobacter bemidjiensis Bem|Rep: Putative uncharacterized
           protein - Geobacter bemidjiensis Bem
          Length = 324

 Score = 34.3 bits (75), Expect = 0.80
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 67  QGLQDRLSLLEEQHLALRSAVLEPQQPLVER-LRREALSRPLYW 109
           +GL   ++++EEQH+    ++L+PQ P +E  L  E     LYW
Sbjct: 145 RGLYQEIAMIEEQHVTQYESLLDPQTPWIENALLHEYNECWLYW 188


>UniRef50_Q4D9W4 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 1236

 Score = 33.9 bits (74), Expect = 1.1
 Identities = 16/52 (30%), Positives = 26/52 (50%)

Query: 49  WCACAMSLISSGYSLYKQQGLQDRLSLLEEQHLALRSAVLEPQQPLVERLRR 100
           WC     ++S      KQ+ LQ++L  ++E HLA    +   +Q   ERL +
Sbjct: 396 WCCLEEKVMSRESESQKQKELQNQLDAMKEAHLAELQTIKSTRQEATERLHQ 447


>UniRef50_Q15KG7 Cluster: Interleukin-15; n=3; Danio rerio|Rep:
           Interleukin-15 - Danio rerio (Zebrafish) (Brachydanio
           rerio)
          Length = 193

 Score = 33.1 bits (72), Expect = 1.9
 Identities = 15/58 (25%), Positives = 30/58 (51%)

Query: 39  SDPWAYCVVLWCACAMSLISSGYSLYKQQGLQDRLSLLEEQHLALRSAVLEPQQPLVE 96
           S+ W   ++L C  A+  ++ G + + +QGL+D L++LE       S+      P ++
Sbjct: 47  SEVWNSILILSCLSALLPLTEGQAGHPEQGLEDLLTILENHKKLFTSSTAHLYTPKID 104


>UniRef50_A3CFB9 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (japonica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 503

 Score = 32.7 bits (71), Expect = 2.4
 Identities = 20/36 (55%), Positives = 21/36 (58%), Gaps = 6/36 (16%)

Query: 89  EPQQP------LVERLRREALSRPLYWRPRRSIRDY 118
           EP QP      LV+RLRR  L RPL  RPRR  R Y
Sbjct: 272 EPPQPRPRLRRLVQRLRRRRLRRPLPRRPRRRRRRY 307


>UniRef50_Q08QB4 Cluster: Tetratricopeptide repeat family; n=17;
           Bacteria|Rep: Tetratricopeptide repeat family -
           Stigmatella aurantiaca DW4/3-1
          Length = 1537

 Score = 32.3 bits (70), Expect = 3.2
 Identities = 16/34 (47%), Positives = 20/34 (58%)

Query: 62  SLYKQQGLQDRLSLLEEQHLALRSAVLEPQQPLV 95
           +LY+ QGL  R   L ++ LALR A L    PLV
Sbjct: 860 NLYRDQGLYGRAEPLHQRALALREATLGTHHPLV 893


>UniRef50_A0LU43 Cluster: Peptidase M50; n=1; Acidothermus
           cellulolyticus 11B|Rep: Peptidase M50 - Acidothermus
           cellulolyticus (strain ATCC 43068 / 11B)
          Length = 379

 Score = 32.3 bits (70), Expect = 3.2
 Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 3/68 (4%)

Query: 40  DPWAYCVVLWCAC--AMSLISSGYSLYKQQGLQDRLSLLEEQHLALRSAVLEPQQPLVER 97
           +P A    LW      M L+SSG ++ +QQ L+D+L  L  + L  R+  +    PL E 
Sbjct: 220 EPNAQLDGLWALLIGGMLLMSSG-AVLRQQALRDKLPQLSARALTRRALPVTADVPLAEA 278

Query: 98  LRREALSR 105
           +RR   S+
Sbjct: 279 VRRAQESK 286


>UniRef50_Q0IQJ5 Cluster: Os12g0117500 protein; n=1; Oryza sativa
           (japonica cultivar-group)|Rep: Os12g0117500 protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 173

 Score = 32.3 bits (70), Expect = 3.2
 Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 3/39 (7%)

Query: 78  EQHLALRSAVLEPQQPLVERLRREA--LSR-PLYWRPRR 113
           ++HL LR+A  + +  LVER RRE   L R PL  RPRR
Sbjct: 121 DKHLGLRAAAAQRRDDLVERRRREGRELRRPPLGRRPRR 159


>UniRef50_Q294J2 Cluster: GA17207-PA; n=1; Drosophila
           pseudoobscura|Rep: GA17207-PA - Drosophila pseudoobscura
           (Fruit fly)
          Length = 1255

 Score = 31.1 bits (67), Expect = 7.5
 Identities = 20/52 (38%), Positives = 26/52 (50%)

Query: 52  CAMSLISSGYSLYKQQGLQDRLSLLEEQHLALRSAVLEPQQPLVERLRREAL 103
           C +S  S+ Y     Q  Q+RL  LE + L   SA     Q L +RL+RE L
Sbjct: 297 CDLSTSSAAYQHPHLQYYQERLDQLERKVLVYESAGEVQAQHLSQRLQREVL 348


>UniRef50_UPI0000ECD699 Cluster: ADP-ribosylation factor-like
           protein 11 (ADP-ribosylation factor-like tumor
           suppressor protein 1).; n=2; Gallus gallus|Rep:
           ADP-ribosylation factor-like protein 11
           (ADP-ribosylation factor-like tumor suppressor protein
           1). - Gallus gallus
          Length = 193

 Score = 30.7 bits (66), Expect = 9.9
 Identities = 17/35 (48%), Positives = 20/35 (57%)

Query: 60  GYSLYKQQGLQDRLSLLEEQHLALRSAVLEPQQPL 94
           G S +  QGLQD L +L E    LR   L P+QPL
Sbjct: 158 GCSAHTGQGLQDILRVLGELLRGLRQGSLIPEQPL 192


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.323    0.137    0.449 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,374,694
Number of Sequences: 1657284
Number of extensions: 4131943
Number of successful extensions: 10644
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 10620
Number of HSP's gapped (non-prelim): 26
length of query: 132
length of database: 575,637,011
effective HSP length: 92
effective length of query: 40
effective length of database: 423,166,883
effective search space: 16926675320
effective search space used: 16926675320
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 66 (30.7 bits)