GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002740-TA|BGIBMGA002740-PA|undefined
         (132 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021342-1|AAX33490.1|  411|Drosophila melanogaster LP22661p pro...    29   2.0  
AE014296-2831|AAF49393.1|  411|Drosophila melanogaster CG13023-P...    29   2.0  
AE013599-1711|AAM68578.1|  249|Drosophila melanogaster CG30061-P...    27   6.2  

>BT021342-1|AAX33490.1|  411|Drosophila melanogaster LP22661p
           protein.
          Length = 411

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 12/40 (30%), Positives = 26/40 (65%)

Query: 76  LEEQHLALRSAVLEPQQPLVERLRREALSRPLYWRPRRSI 115
           +EE+ L  +SA +E Q+ L++ ++ E +++P+   P+  I
Sbjct: 347 IEEEILKQQSARIEQQKELIKTIQAEPVTKPIQAEPQTKI 386


>AE014296-2831|AAF49393.1|  411|Drosophila melanogaster CG13023-PA
           protein.
          Length = 411

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 12/40 (30%), Positives = 26/40 (65%)

Query: 76  LEEQHLALRSAVLEPQQPLVERLRREALSRPLYWRPRRSI 115
           +EE+ L  +SA +E Q+ L++ ++ E +++P+   P+  I
Sbjct: 347 IEEEILKQQSARIEQQKELIKTIQAEPVTKPIQAEPQTKI 386


>AE013599-1711|AAM68578.1|  249|Drosophila melanogaster CG30061-PA
           protein.
          Length = 249

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)

Query: 58  SSGYSLYKQQGLQDRLSLLEEQHLALRSAVLEPQQPLVERLRREALSRPLYWRP 111
           S G  L +Q G + R+SLL ++ L + ++ L  ++   E L+    S+PL+  P
Sbjct: 161 SKGSILSRQSG-KSRVSLLAQRGLRMTASFLRRKRTEYEELKAPPGSQPLWTDP 213


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.323    0.137    0.449 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,077,509
Number of Sequences: 52641
Number of extensions: 204975
Number of successful extensions: 537
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 535
Number of HSP's gapped (non-prelim): 3
length of query: 132
length of database: 24,830,863
effective HSP length: 77
effective length of query: 55
effective length of database: 20,777,506
effective search space: 1142762830
effective search space used: 1142762830
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 57 (27.1 bits)