Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002740-TA|BGIBMGA002740-PA|undefined
(132 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55374-3|AAB36866.2| 589|Caenorhabditis elegans Immunoglobulin-... 28 2.5
AF106575-14|AAC78163.2| 365|Caenorhabditis elegans Serpentine r... 27 3.3
Z93392-1|CAB07687.2| 1737|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z83219-9|CAB05699.2| 1737|Caenorhabditis elegans Hypothetical pr... 27 4.4
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 27 4.4
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 27 4.4
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 27 4.4
AL032648-9|CAB54460.1| 1737|Caenorhabditis elegans Hypothetical ... 27 4.4
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 27 4.4
Z83106-4|CAB05496.1| 343|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z74028-2|CAA98428.1| 1058|Caenorhabditis elegans Hypothetical pr... 26 7.7
>U55374-3|AAB36866.2| 589|Caenorhabditis elegans
Immunoglobulin-like cell adhesionmolecule family protein
3 protein.
Length = 589
Score = 27.9 bits (59), Expect = 2.5
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 69 LQDRLSLLEEQHLALRSAVLEPQQPLVERLRREALSRPL-YWRPRRSIRDYGDCGCP 124
L+D L+ L S +E Q + E RP+ YWR R+ D D CP
Sbjct: 257 LKDNFQKLQSTSPFLASNRIEMNQQVNMGCEVEGNPRPIVYWRMRKPNGDVVDAACP 313
>AF106575-14|AAC78163.2| 365|Caenorhabditis elegans Serpentine
receptor, class w protein98 protein.
Length = 365
Score = 27.5 bits (58), Expect = 3.3
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 35 EKCPSDPWAYCVVLWCACAMSLISSGY 61
+KC + + V+ WC S++SS Y
Sbjct: 153 QKCSKPAFGFAVIFWCFVFSSMLSSFY 179
>Z93392-1|CAB07687.2| 1737|Caenorhabditis elegans Hypothetical protein
Y48E1A.1a protein.
Length = 1737
Score = 27.1 bits (57), Expect = 4.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 100 REALSRPLYWRPRRSIRDYGD 120
+E L R LYW+ RS+ D G+
Sbjct: 1213 KEVLKRTLYWKGMRSLADPGE 1233
>Z83219-9|CAB05699.2| 1737|Caenorhabditis elegans Hypothetical protein
Y48E1A.1a protein.
Length = 1737
Score = 27.1 bits (57), Expect = 4.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 100 REALSRPLYWRPRRSIRDYGD 120
+E L R LYW+ RS+ D G+
Sbjct: 1213 KEVLKRTLYWKGMRSLADPGE 1233
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 27.1 bits (57), Expect = 4.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 31 ERCDEKCPSDPWAYCVVLWCAC 52
ERC++ CP + W V C C
Sbjct: 188 ERCEKPCPDNKWGPNCVKSCPC 209
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 27.1 bits (57), Expect = 4.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 31 ERCDEKCPSDPWAYCVVLWCAC 52
ERC++ CP + W V C C
Sbjct: 188 ERCEKPCPDNKWGPNCVKSCPC 209
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 27.1 bits (57), Expect = 4.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 31 ERCDEKCPSDPWAYCVVLWCAC 52
ERC++ CP + W V C C
Sbjct: 188 ERCEKPCPDNKWGPNCVKSCPC 209
>AL032648-9|CAB54460.1| 1737|Caenorhabditis elegans Hypothetical
protein Y48E1A.1a protein.
Length = 1737
Score = 27.1 bits (57), Expect = 4.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 100 REALSRPLYWRPRRSIRDYGD 120
+E L R LYW+ RS+ D G+
Sbjct: 1213 KEVLKRTLYWKGMRSLADPGE 1233
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 27.1 bits (57), Expect = 4.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 31 ERCDEKCPSDPWAYCVVLWCAC 52
ERC++ CP + W V C C
Sbjct: 188 ERCEKPCPDNKWGPNCVKSCPC 209
>Z83106-4|CAB05496.1| 343|Caenorhabditis elegans Hypothetical
protein F22B8.5 protein.
Length = 343
Score = 26.6 bits (56), Expect = 5.8
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 56 LISSGYSLYKQQGLQDRLSLLEEQHLAL 83
+I GY++Y G+Q +LSLL QH L
Sbjct: 220 IIVCGYNMY--HGMQTKLSLLSAQHRRL 245
>Z74028-2|CAA98428.1| 1058|Caenorhabditis elegans Hypothetical
protein C14C10.4 protein.
Length = 1058
Score = 26.2 bits (55), Expect = 7.7
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 54 MSLISSGYSLYKQQGLQDRLSLLEEQHLALRSAVLE 89
M+ ++ Y+L +Q SL+E Q+L + S VL+
Sbjct: 934 MANVNLAYALIHSNNMQRARSLIERQNLNIESRVLQ 969
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.323 0.137 0.449
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,904,975
Number of Sequences: 27539
Number of extensions: 93251
Number of successful extensions: 249
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 228
Number of HSP's gapped (non-prelim): 23
length of query: 132
length of database: 12,573,161
effective HSP length: 74
effective length of query: 58
effective length of database: 10,535,275
effective search space: 611045950
effective search space used: 611045950
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 55 (26.2 bits)
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