GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002738-TA|BGIBMGA002738-PA|undefined
         (87 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    20   3.3  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    20   3.3  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    20   3.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    19   7.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     19   7.6  

>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
          oxygenase protein.
          Length = 228

 Score = 20.2 bits (40), Expect = 3.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 58 TVQQPIVSKKESELLRREK 76
          T Q+ +  K+E+E L+R K
Sbjct: 56 TEQKELAEKEEAETLKRYK 74


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 3.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 58  TVQQPIVSKKESELLRREK 76
           T Q+ +  K+E+E L+R K
Sbjct: 216 TEQKELAEKEEAETLKRYK 234


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 3.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 58  TVQQPIVSKKESELLRREK 76
           T Q+ +  K+E+E L+R K
Sbjct: 216 TEQKELAEKEEAETLKRYK 234


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 19.0 bits (37), Expect = 7.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)

Query: 44  RVIALEEKLKDLE 56
           RV+AL EK  DL+
Sbjct: 579 RVVALREKNPDLK 591


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 19.0 bits (37), Expect = 7.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)

Query: 6   RQEGREENVLNK 17
           R+EG++ N LNK
Sbjct: 385 RREGKQLNPLNK 396


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.139    0.439 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,851
Number of Sequences: 317
Number of extensions: 657
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 87
length of database: 114,650
effective HSP length: 47
effective length of query: 40
effective length of database: 99,751
effective search space:  3990040
effective search space used:  3990040
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (20.1 bits)
S2: 37 (19.0 bits)