Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002737-TA|BGIBMGA002737-PA|undefined
(335 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC664.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 38 0.003
SPBC2F12.09c |atf21||transcription factor Atf21|Schizosaccharomy... 30 0.40
SPAC664.09 |ggt1||gamma-glutamyltranspeptidase Ggt1 |Schizosacch... 30 0.53
SPCC613.03 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.93
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 29 0.93
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 29 0.93
SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8 |... 29 1.2
SPAC22H10.11c ||||Schizosaccharomyces pombe|chr 1|||Manual 28 1.6
SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces ... 28 1.6
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 28 1.6
SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 3.8
SPBC776.13 |cnd1||condensin subunit Cnd1|Schizosaccharomyces pom... 27 3.8
SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 27 3.8
SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces p... 27 5.0
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 26 6.6
SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces pomb... 26 6.6
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 26 8.7
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 26 8.7
SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces pom... 26 8.7
>SPAC664.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 117
Score = 37.5 bits (83), Expect = 0.003
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 9/114 (7%)
Query: 126 LINLSKSRCHDDDKIETGSIKKSPVSLFRYDRNPKKIPDGEENNLAHFENNRNEVYAEVD 185
+I + RC + + E + S SL D K+ D EN L H ++N + E +
Sbjct: 9 IIQEEQIRC-EREIAEAAEARNSSNSLIVVDEYSKESEDVLENGLEHVQSNE---FTESE 64
Query: 186 SNKHNILNERTYEVTEDT--ELDQNVGTTNNPLNYIHEKPENDLREGSLNTTAK 237
K ER+ VTE ++ +G+ + +N+ H+ +ND +G L ++K
Sbjct: 65 DYKSI---ERSLAVTEAVMARFEKEMGSLRDQMNFFHQILDNDNLDGFLTGSSK 115
>SPBC2F12.09c |atf21||transcription factor Atf21|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 30.3 bits (65), Expect = 0.40
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 7/140 (5%)
Query: 103 LGDALLKYYFNIANDFNKDILVYLINLSKSRCHDD--DKIETGSIKKSPV--SLFRYDRN 158
+GDA + +Y ++ L +NLS+ ++D T ++ + V SL+
Sbjct: 85 VGDASIGHYLKGPERTSEVSLPQTVNLSEISNNNDKGQPTNTPPVRSTIVAPSLYSEGST 144
Query: 159 PKKIPDGEENNL-AHFENNRNEVYAEVDSNKHNILNERTYEVTEDTELDQNVGTTNNPLN 217
+G L F+N N Y + N +N E + +L +N T NN +
Sbjct: 145 LNHYNNGSHQVLHPQFQNGTNAPYVVQSNLMQNNVNLTGAEQEKGLDLYKNSATANN--D 202
Query: 218 YIHEKPENDLREGSLNTTAK 237
I E+ REG LN+ K
Sbjct: 203 EIFYNLESLRREGYLNSNKK 222
>SPAC664.09 |ggt1||gamma-glutamyltranspeptidase Ggt1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 630
Score = 29.9 bits (64), Expect = 0.53
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 168 NNLAHFENNRNEVYAEVDSNKHNILNERTYEVTE---DTELDQNVGTTNNPLNYIHEKPE 224
NN H E + YA D ++NI NERT++ T + + + GTT+ L+ I +
Sbjct: 397 NNTDHVEQLLSLEYA--DEIRNNISNERTFDFTHYKAEYDFPNDHGTTH--LSVIDKDNM 452
Query: 225 NDLREGSLNTTAKLQDILSKYGININDDLPNYA 257
S+N Q + + GI +ND + ++A
Sbjct: 453 AVGLTASINLMFGSQLLEPETGIILNDHMDDFA 485
>SPCC613.03 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 189
Score = 29.1 bits (62), Expect = 0.93
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 239 QDILSKYGININDDLPNYALSRRLTRSMPIKMPRYNNHLPLDPLLA 284
QDILS YG+ ND++P + L + P N + LD LA
Sbjct: 56 QDILSLYGLFENDEVPFVKKNEVLVDVLKKCDPSGNRRITLDEFLA 101
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 29.1 bits (62), Expect = 0.93
Identities = 19/93 (20%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Query: 81 TMNDEKYTALRQSRNMRSKCKDLGDALLKYYFNIANDFNK-DILVYLINLSKSRCHDDDK 139
T+ ++ T LR++RN+ K ++ + L K + + A F++ ++ ++ L + DD
Sbjct: 1843 TLRKDQDTLLRENRNLERKLHEVSEQLNKKFDSSARPFDEIEMEKEVLTLKSNLAQKDDL 1902
Query: 140 IETGSIKKSPVSLFRYDRNPKKIPDGEENNLAH 172
+ + + + +F EEN H
Sbjct: 1903 LSSLVERIKQIEMFALKTQKDSNNHREENLQLH 1935
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 29.1 bits (62), Expect = 0.93
Identities = 20/69 (28%), Positives = 27/69 (39%), Gaps = 2/69 (2%)
Query: 139 KIETGSIKKSPVSLFRYDRNPKKIPDGEENNLAHFENNRNEVYAEVDSNKHNILNERTYE 198
KI T + SPV N I GE+ N +N N E + N NE +
Sbjct: 51 KITTNEKQSSPVDSHNESPNDTTINKGEDGNENEVDNVNNNDKKEDEDNVEE--NEEEAD 108
Query: 199 VTEDTELDQ 207
E+ E D+
Sbjct: 109 ANEEEEEDE 117
>SPAC13A11.01c |rga8|SPAC2F7.18c|GTPase activating protein Rga8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 777
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 197 YEVTEDTELDQNVGTTNNPLNYIHEKPENDLREGSLNTTAKLQDILSKY 245
Y E+ QN+ N+PL+ +H+ LRE ++++ +++LS+Y
Sbjct: 482 YPTLASDEVRQNIWLVNSPLSSVHQ-----LREALNHSSSVTKEVLSQY 525
>SPAC22H10.11c ||||Schizosaccharomyces pombe|chr 1|||Manual
Length = 629
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 147 KSPVSLFRYDRNPKKIP--DGEENNLAHFENNRNEVYAEVDSNKHNILNERTY 197
K P +F+ +R +P D EEN F +++ + E+ +K ++E+ +
Sbjct: 38 KMPTFIFQEERQKLDLPLSDSEENQFHDFSDSKLSLGFEIGRSKEKFVDEKPF 90
>SPAC7D4.04 |taf1||Taz1 interacting factor 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 926
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 63 YHELNKEAEFLKKIVH-RDTMNDEKYTALRQSRNMRSKCKDLGDALLKYYF 112
Y L K+AE ++ I+ RD EK L+ S N + +CK L L F
Sbjct: 674 YATLAKDAEAVQHIIEERDYALAEKADLLKLSENRKEQCKILTQKLYTIVF 724
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 28.3 bits (60), Expect = 1.6
Identities = 22/105 (20%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Query: 7 DYVNFIKVQIHLSFKLNNVDASIEYGIVKNNNDWIPITDPEKYVQRGQSGDGEVKP-YHE 65
DY N +K ++ L + + + IE+ ++ +++ E + ++ E+ P Y+
Sbjct: 294 DYTNIMKSKVALELQSSQLSRQIEFSKKDESSKLNILSELESKISEKENELSEILPKYNA 353
Query: 66 LNKEAEFLKKIVHRDTMNDEKYTAL-RQSRNMRSKCKDLGDALLK 109
+ EA+ L K + + ++K + L +QSR + K D ++
Sbjct: 354 IVSEADDLNKRIM--LLKNQKQSLLDKQSRTSQFTTKKERDEWIR 396
>SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 841
Score = 27.1 bits (57), Expect = 3.8
Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Query: 136 DDDKIETGSIKKSPVSLFRYDRN-PKKIPDGEENNLAHFE--NNRNEVYAEVDSNKHNIL 192
+D+ + + S S Y+R+ P D E L N +E++ +++S+K
Sbjct: 550 NDEHADCDDVNFSTASFEIYERSIPTHGADSERKILKRDSLLNEDDEIFNDLNSDKTIKT 609
Query: 193 NERTYEVTEDTELDQNVGTTNNPLN 217
N+ T + +T+ GT N+ +N
Sbjct: 610 NQATSTSSSNTQEISYTGTLNDNIN 634
>SPBC776.13 |cnd1||condensin subunit Cnd1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1158
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 213 NNPLNYIHEKPENDLREGSLNTTAKLQDILSKYGININDDLPNYALSRRL-TRSMPIKMP 271
N ++ IH++ +N++ E T L D+LS+ ++I+ L + +PIK P
Sbjct: 333 NVVIDQIHDEAQNEMSESVPATVQSLMDLLSERLLDISPYCRTKVLHVFIKIFDLPIKYP 392
Query: 272 R 272
R
Sbjct: 393 R 393
>SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 673
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 47 EKYVQRGQSGDGEVKPYHELNKEAEFLKKIVHRD 80
E+Y QR + D E + Y ELN + K +VH D
Sbjct: 551 ERYRQRAER-DTEEQIYSELNMQRPVPKTVVHED 583
>SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1040
Score = 26.6 bits (56), Expect = 5.0
Identities = 20/98 (20%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Query: 130 SKSRCHDDDKIETGSIKKSPVSLFRYDRNPKKIPDGEENNLAHFENNRNEVYAEVDSNKH 189
+KS +D DK+ + ++ R ++P + A + N + + +
Sbjct: 201 TKSSLNDHDKVNMKEKRNLELAFMNSKRKKLELPSLPVLSTAG-PSYTNSLALPPFHHHN 259
Query: 190 NILNERTYEVTEDTELDQNVGTTNNPLNYIHEKPENDL 227
N T ED + Q GT+NNP++ + ++ +N++
Sbjct: 260 NYKMFNTTHTLEDDKFLQGKGTSNNPIS-LSDEEDNEI 296
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 26.2 bits (55), Expect = 6.6
Identities = 21/92 (22%), Positives = 43/92 (46%), Gaps = 13/92 (14%)
Query: 130 SKSRCHDDDKIETGSIKKSPVSLFRYDRN---PKKIPDGEENNLAHFENNRN-------- 178
S R + +++ KK+ V + +D++ PK I +++ L F N+ +
Sbjct: 137 SYERVLSNASVDSALDKKAEVDIIPFDKSVMEPKNITFNDKSGLTKFGNSNSYETTYSDS 196
Query: 179 -EVYAEVDSNKHNILNERTYEVTED-TELDQN 208
+ DS+++N ++ Y+ T D T+ D N
Sbjct: 197 SNYHTSTDSSQYNDQDDHVYDDTNDGTDDDIN 228
>SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 510
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 228 REGSLNTTAKLQDILSKYGINI----NDDLPNYALSRRLTRSM 266
REG +++ +QD++S I + ND L NY +LTRS+
Sbjct: 340 REGIESSSKLIQDLVSTVPILLFYGENDFLCNYLSGEKLTRSL 382
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 25.8 bits (54), Expect = 8.7
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Query: 128 NLSKSRCHDDDKIE----TGSIKKSPVSLFRYDRNPKKIPDGEENNLAHFENNRNEVYAE 183
NL+ R H+ K + G++ ++P N + E N+ +N R+EV
Sbjct: 1458 NLNARREHESQKSDRWRQNGNVNRNPRVSNNNSTNVSRERSSEANHRTSNDNKRDEVTEG 1517
Query: 184 VDSNK 188
D NK
Sbjct: 1518 KDKNK 1522
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 25.8 bits (54), Expect = 8.7
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 5/44 (11%)
Query: 67 NKEAEFLKKIVHRDTMNDEKYTALRQSRNMRSKCKDLGDALLKY 110
NKE E K+ ++ +N+ K + ++ N KC++L DA LKY
Sbjct: 1112 NKELE--AKV--KECLNNIK-SLTKELENKEEKCQNLSDASLKY 1150
>SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 264
Score = 25.8 bits (54), Expect = 8.7
Identities = 24/120 (20%), Positives = 48/120 (40%), Gaps = 13/120 (10%)
Query: 156 DRNPKKIPDGEENNLAHFENNRNEVYAEVDSNKHNILNERTYEVTEDTELDQNVGTTNNP 215
D+ ++ D E N+ E + + ++ Y TE+T+L + + + N+
Sbjct: 76 DKLQQENKDQELKNIEESYKKLEEKTEHLSDDNVSLEKRVEYLETENTKLVKTLNSLNSE 135
Query: 216 LNYIHEKPENDLREGSLNTTAKLQD-------------ILSKYGININDDLPNYALSRRL 262
+ K +++EG TT D +L + + +ND L N +R+L
Sbjct: 136 FLQLLRKIAINVKEGRQLTTENSSDTSSMTHPVQPSPSVLGSFDLEVNDSLTNAEKNRKL 195
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.135 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,754,689
Number of Sequences: 5004
Number of extensions: 84669
Number of successful extensions: 207
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 203
Number of HSP's gapped (non-prelim): 20
length of query: 335
length of database: 2,362,478
effective HSP length: 73
effective length of query: 262
effective length of database: 1,997,186
effective search space: 523262732
effective search space used: 523262732
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 54 (25.8 bits)
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