Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002737-TA|BGIBMGA002737-PA|undefined
(335 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0114 + 5704002-5704037,5704547-5704666,5705040-5705076,570... 35 0.11
03_01_0009 - 89127-89924,90090-90518,90582-90716,91102-91382,916... 33 0.32
07_03_0335 - 16903775-16904118,16904203-16904325,16904424-16905993 31 0.99
10_08_0015 + 14116129-14116691,14116810-14117128,14117588-141186... 31 1.7
10_02_0113 + 5410413-5410471,5411330-5413309,5413535-5413594,541... 30 2.3
02_05_0459 + 29217728-29217919,29218095-29218190,29219785-292198... 30 2.3
07_03_1696 - 28779455-28779733,28779813-28780074,28780805-287809... 29 4.0
06_02_0251 - 13478902-13478952,13478989-13479055,13479168-134793... 29 4.0
01_06_0430 + 29299970-29300031,29300162-29300294,29301057-293011... 29 4.0
07_01_0863 + 7177443-7177471,7178300-7178399,7178628-7178899,717... 28 9.2
04_03_0905 - 20722090-20722207,20722314-20722395,20722698-207228... 28 9.2
>03_02_0114 +
5704002-5704037,5704547-5704666,5705040-5705076,
5705905-5705981,5706642-5706755,5706902-5706969,
5707051-5707129,5707367-5707511,5707627-5707731,
5707917-5707994,5708192-5708247,5708533-5708651,
5708853-5709096,5709203-5709385,5709956-5710264,
5710350-5710399,5711042-5711102,5711184-5711267,
5711461-5711577,5711665-5711831,5711938-5712010,
5712497-5712581,5712693-5712886,5713073-5713228
Length = 918
Score = 34.7 bits (76), Expect = 0.11
Identities = 48/223 (21%), Positives = 95/223 (42%), Gaps = 15/223 (6%)
Query: 27 ASIEYGIVKNNNDWIPITDPEKYVQRGQSGDGEVKPYHELNKEAEFLKKIVHRDTMNDEK 86
A E+G+++ + + I P + + +S D + HE N + ++K R + + K
Sbjct: 511 ARTEHGVLREDTNQISSVPPVENTSQMESNDPSHRKLHESNGSTDQIEKSNVRASSSRAK 570
Query: 87 YTALRQSRNMRSKCKDLGDALLKYYFNI-ANDFNKDILVYLINLSKSRCHDDDKIETGSI 145
+ SRN +SK LG A + + DF D + L ++ KI T +
Sbjct: 571 FMEKSSSRN-KSKKTLLGRASARRDLSADETDFCSDDETLIEKLENNKTDLQSKI-TKEV 628
Query: 146 KKSPVSLFRYDRNPKKIPDGEENNLAHFENNRNEVYAEVD---SNKHNILNERTYEVTED 202
K++ + R +++ + EN R+++ E S + ++N R +V+
Sbjct: 629 KENSILQASLGRRKEELHERRLALEKEVENLRDQLQKERKLRASLESGLMNLRRGQVSFP 688
Query: 203 TELD-------QNVGTTNNPLNYIHEKPENDLREGSLNTTAKL 238
+ +D + V T + + +K +DLR G LN ++
Sbjct: 689 STIDSKTKADLEEVATAEADILNLKQK-VSDLR-GQLNNNVQM 729
>03_01_0009 -
89127-89924,90090-90518,90582-90716,91102-91382,
91634-91809,91899-92011,92157-92278,92375-92594
Length = 757
Score = 33.1 bits (72), Expect = 0.32
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 231 SLNTTAKLQDILSKYGININDDLPNYALSRRLTRSMPIKMPRYNNHLPLD 280
S ++T LQ LS++ +DD P + L LT+ + + P NH+P+D
Sbjct: 33 SKSSTYALQWALSRFKFTKDDDAPIFLLIHVLTKLLTVPTP-MGNHIPID 81
>07_03_0335 - 16903775-16904118,16904203-16904325,16904424-16905993
Length = 678
Score = 31.5 bits (68), Expect = 0.99
Identities = 34/131 (25%), Positives = 52/131 (39%), Gaps = 13/131 (9%)
Query: 156 DRNPKKIPDGEENNLAHFENNRNE----VYAEVDSNKHNILNERTYEVTEDTELDQNVGT 211
D N I DG EN +N E V A ++ NILN E+ + L +N+
Sbjct: 162 DSNDSSIEDGNENQEGKDDNEHEEKNGKVVAWTADDQKNILNIGCLEIERNQRL-ENLIA 220
Query: 212 TNNPLNYIHEKPENDLREGSLNTTAKLQDILSKYGININDDLPNYALSRRLTRSMPIKMP 271
YI N + GS ++ K+++ LSK+ + I P R+ +P
Sbjct: 221 RRRARKYI---DRNLIDFGSSDSLPKIEE-LSKFNVQI----PAIFAPRKNPFDLPYNED 272
Query: 272 RYNNHLPLDPL 282
+ P PL
Sbjct: 273 NFPESAPSAPL 283
>10_08_0015 +
14116129-14116691,14116810-14117128,14117588-14118664,
14118754-14119056
Length = 753
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/59 (25%), Positives = 30/59 (50%)
Query: 151 SLFRYDRNPKKIPDGEENNLAHFENNRNEVYAEVDSNKHNILNERTYEVTEDTELDQNV 209
++FRY + P G++ + N N+ E+++ ++L+E T+E E+ NV
Sbjct: 24 AMFRYITKESQGPSGDQTLDSDVANEPNDGETEIETTVDDVLSESTHEQVENHGDGDNV 82
>10_02_0113 + 5410413-5410471,5411330-5413309,5413535-5413594,
5416037-5418047
Length = 1369
Score = 30.3 bits (65), Expect = 2.3
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 63 YHELNKEAEFLKKIVHRDTMNDEK--YTALRQSRNMRSKCKDLGDALLKYYFNIANDFNK 120
+ L K LK+I+ T++DEK +RQS + C G + + I+N +
Sbjct: 1251 HFRLGKARRLLKRIIRASTVHDEKTLLRYVRQSPGVTEPCFSRGRVITDHLLKISNGAQR 1310
Query: 121 DILVYLI 127
L+ ++
Sbjct: 1311 WELISMV 1317
>02_05_0459 +
29217728-29217919,29218095-29218190,29219785-29219895,
29219984-29220293,29220745-29220835,29220976-29221285,
29221469-29221617,29221914-29222418
Length = 587
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 74 KKIVHRDTMNDEKYTALRQSRNMRSKCKDLGDALLKYYFNIANDFNKDILVYLINLSKSR 133
KKI+ + + DEK AL + +N+++ + G+AL + D+N+ +L+ IN K +
Sbjct: 166 KKILEK-MLEDEKEKALLKKQNIQANAEAKGEALTR-EAKALEDYNRKMLLERINGDKEK 223
>07_03_1696 -
28779455-28779733,28779813-28780074,28780805-28780956,
28781765-28781961,28782258-28782462,28782737-28782982,
28783603-28783719,28784206-28784397,28784480-28784693,
28784835-28784926,28784952-28785001,28785494-28785812,
28785908-28786068,28786407-28786650,28787212-28787467,
28787634-28787834,28788568-28788910,28789003-28789064,
28789645-28789851,28790170-28790978
Length = 1535
Score = 29.5 bits (63), Expect = 4.0
Identities = 17/73 (23%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 81 TMNDEKYTALRQSRNMRSKCKDLGDALLKYYFNIANDFNKDILVYLINLSKSRCHDD-DK 139
T D + +R+ R+ +K + + D+ + ++ND +LV L+ L ++ CH
Sbjct: 684 TCMDHAHEIIRRIRDDANKSEPISDSNVVSNLYLSNDDIAKLLVPLLKLRQACCHPQVGS 743
Query: 140 IETGSIKKSPVSL 152
S++++P+S+
Sbjct: 744 FGLCSLQRTPLSM 756
>06_02_0251 -
13478902-13478952,13478989-13479055,13479168-13479379,
13480144-13481540,13481574-13482432,13482537-13482836
Length = 961
Score = 29.5 bits (63), Expect = 4.0
Identities = 22/95 (23%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 145 IKKSPVSLFRYDRNPKKIPDGEENNLAHFENN---RNEVYAEVDSNKHNILNERTYEVTE 201
I KSP R P + G ++ E + R+ + + K+NI++ E
Sbjct: 608 ITKSPQ---RIGEEPVDLMRGNAQSMQELEPSSSIRDHKQIVLANQKNNIISRSHNETQA 664
Query: 202 DTELDQNVGTTNNP-LNYIHEKPENDLREGSLNTT 235
+E+D ++GT +N + +++ PE + + + N+T
Sbjct: 665 SSEID-SIGTNDNASTSSVYDLPEESIHQSAKNST 698
>01_06_0430 +
29299970-29300031,29300162-29300294,29301057-29301160,
29302201-29302372,29302488-29302628,29302707-29303055,
29303133-29305477
Length = 1101
Score = 29.5 bits (63), Expect = 4.0
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 177 RNEVYAEVDSNKHNILNERTYEVTEDTELDQNVGTTNNPLNYIHEKPENDLREGSLNTTA 236
RN +E D K L+E++Y ++++ G N+ + HEKP R G+ TA
Sbjct: 886 RNYYGSEGDRGK---LSEQSYNAPSSV-MNKSSGGVNSSQDLYHEKPGAGARRGTTTKTA 941
Query: 237 K 237
K
Sbjct: 942 K 942
>07_01_0863 +
7177443-7177471,7178300-7178399,7178628-7178899,
7179143-7179794,7179886-7180085,7180317-7180417,
7180559-7181697
Length = 830
Score = 28.3 bits (60), Expect = 9.2
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 208 NVGTTNNPLNYIHEKPENDLREGSLNTTAKLQDILSKYGINI----NDDLPNYALSRRLT 263
N T+ +P + I E E+D+REGS+ ++ G + NDDL + +R +
Sbjct: 659 NRSTSKDPQSVI-EPRESDVREGSIENDVCASQSQAECGDEVSDEQNDDLDRFVFKKRKS 717
Query: 264 R 264
R
Sbjct: 718 R 718
>04_03_0905 -
20722090-20722207,20722314-20722395,20722698-20722851,
20723026-20723089,20724282-20724404,20725326-20725452,
20725541-20726171
Length = 432
Score = 28.3 bits (60), Expect = 9.2
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 100 CKDLGDALLKYYFNIANDFNKDILVYLINLSKSRCHDDDKIET 142
C DL LL Y ++ + LIN SK R HDD ++++
Sbjct: 253 CIDLDKILLVLYLR-PDEAQLQFFLILINTSKFRRHDDSQLDS 294
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.135 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,625,185
Number of Sequences: 37544
Number of extensions: 411956
Number of successful extensions: 704
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 701
Number of HSP's gapped (non-prelim): 12
length of query: 335
length of database: 14,793,348
effective HSP length: 82
effective length of query: 253
effective length of database: 11,714,740
effective search space: 2963829220
effective search space used: 2963829220
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 60 (28.3 bits)
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