GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002737-TA|BGIBMGA002737-PA|undefined
         (335 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY045760-4|AAK84945.1|  165|Anopheles gambiae D7-related 4 prote...    27   0.74 
AJ302659-1|CAC35524.1|  165|Anopheles gambiae D7r4 protein protein.    27   0.74 
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     25   3.0  

>AY045760-4|AAK84945.1|  165|Anopheles gambiae D7-related 4 protein
           protein.
          Length = 165

 Score = 27.1 bits (57), Expect = 0.74
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 186 SNKHNILNERTYEVTEDTELDQNVGTTNNPLNYIHEKPEND 226
           S K  +   R YE+ E  E+D+++      L++++E    D
Sbjct: 34  SLKSRLCEIRRYEIIEGPEMDKHIHCVMRALDFVYEDGRGD 74


>AJ302659-1|CAC35524.1|  165|Anopheles gambiae D7r4 protein protein.
          Length = 165

 Score = 27.1 bits (57), Expect = 0.74
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 186 SNKHNILNERTYEVTEDTELDQNVGTTNNPLNYIHEKPEND 226
           S K  +   R YE+ E  E+D+++      L++++E    D
Sbjct: 34  SLKSRLCEIRRYEIIEGPEMDKHIHCVMRALDFVYEDGRGD 74


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 45  DPEKYVQRGQSGDGEVKPYHELNKEAEFLKKIVHRDT 81
           D ++++ R  SG+GE K   + NKE + +K +   DT
Sbjct: 88  DCKEFLNRESSGEGEKKKKIKPNKEQQ-VKTVRENDT 123


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.314    0.135    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 368,417
Number of Sequences: 2123
Number of extensions: 17165
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 3
length of query: 335
length of database: 516,269
effective HSP length: 64
effective length of query: 271
effective length of database: 380,397
effective search space: 103087587
effective search space used: 103087587
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 48 (23.4 bits)