Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002737-TA|BGIBMGA002737-PA|undefined
(335 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK024435-1|BAB15725.1| 955|Homo sapiens FLJ00025 protein protein. 33 1.4
BC028353-1|AAH28353.1| 1241|Homo sapiens intraflagellar transpor... 32 3.3
BC004238-1|AAH04238.1| 1131|Homo sapiens intraflagellar transpor... 32 3.3
BC003045-1|AAH03045.2| 1131|Homo sapiens intraflagellar transpor... 32 3.3
AK223095-1|BAD96815.1| 1182|Homo sapiens WD repeat domain 10 iso... 32 3.3
AK022525-1|BAB14077.1| 864|Homo sapiens protein ( Homo sapiens ... 32 3.3
AK001759-1|BAA91888.1| 993|Homo sapiens protein ( Homo sapiens ... 32 3.3
AF302154-1|AAG13415.1| 1241|Homo sapiens SPG protein protein. 32 3.3
AF244931-1|AAG15428.1| 1292|Homo sapiens WDR10p-L protein. 32 3.3
AF244930-1|AAG15427.1| 1242|Homo sapiens WDR10p protein. 32 3.3
AF057694-1|AAC13540.1| 1199|Homo sapiens TBP-associated factor T... 32 3.3
AF040701-1|AAC68502.1| 1189|Homo sapiens TATA binding protein as... 32 3.3
AF026445-1|AAC02966.1| 1199|Homo sapiens cofactor of initiator f... 32 3.3
>AK024435-1|BAB15725.1| 955|Homo sapiens FLJ00025 protein protein.
Length = 955
Score = 33.1 bits (72), Expect = 1.4
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Query: 29 IEYGIVKNNNDWI--PITDPEK-YVQRGQSGDGEVKPYHELNKEAEFLKK--IVHRDTMN 83
+ G V N W+ + P+ YV G DG + Y + L K +RD+M
Sbjct: 247 VRLGTVGEQNSWVWTCLAKPDSNYVVVGCQ-DGTISFYQLIFSTVHGLYKDRYAYRDSMT 305
Query: 84 DEKYTALRQSRNMRSKCKDLGDALLKYYFNIANDFNKDILVY 125
D L + +R KCK+L + Y +A + IL+Y
Sbjct: 306 DVIVQHLITEQKVRIKCKELVKKIAIYRNRLAIQLPEKILIY 347
>BC028353-1|AAH28353.1| 1241|Homo sapiens intraflagellar transport
122 homolog (Chlamydomonas) protein.
Length = 1241
Score = 31.9 bits (69), Expect = 3.3
Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 6/102 (5%)
Query: 29 IEYGIVKNNNDWI---PITDPEKYVQRGQSGDGEVKPYHELNKEAEFLKK--IVHRDTMN 83
+ G V N W+ YV G DG + Y + L K +RD+M
Sbjct: 312 VRLGTVGEQNSWVWTCQAKPDSNYVVVGCQ-DGTISFYQLIFSTVHGLYKDRYAYRDSMT 370
Query: 84 DEKYTALRQSRNMRSKCKDLGDALLKYYFNIANDFNKDILVY 125
D L + +R KCK+L + Y +A + IL+Y
Sbjct: 371 DVIVQHLITEQKVRIKCKELVKKIAIYRNRLAIQLPEKILIY 412
>BC004238-1|AAH04238.1| 1131|Homo sapiens intraflagellar transport
122 homolog (Chlamydomonas) protein.
Length = 1131
Score = 31.9 bits (69), Expect = 3.3
Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 6/102 (5%)
Query: 29 IEYGIVKNNNDWI---PITDPEKYVQRGQSGDGEVKPYHELNKEAEFLKK--IVHRDTMN 83
+ G V N W+ YV G DG + Y + L K +RD+M
Sbjct: 201 VRLGTVGEQNSWVWTCQAKPDSNYVVVGCQ-DGTISFYQLIFSTVHGLYKDRYAYRDSMT 259
Query: 84 DEKYTALRQSRNMRSKCKDLGDALLKYYFNIANDFNKDILVY 125
D L + +R KCK+L + Y +A + IL+Y
Sbjct: 260 DVIVQHLITEQKVRIKCKELVKKIAIYRNRLAIQLPEKILIY 301
>BC003045-1|AAH03045.2| 1131|Homo sapiens intraflagellar transport
122 homolog (Chlamydomonas) protein.
Length = 1131
Score = 31.9 bits (69), Expect = 3.3
Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 6/102 (5%)
Query: 29 IEYGIVKNNNDWI---PITDPEKYVQRGQSGDGEVKPYHELNKEAEFLKK--IVHRDTMN 83
+ G V N W+ YV G DG + Y + L K +RD+M
Sbjct: 201 VRLGTVGEQNSWVWTCQAKPDSNYVVVGCQ-DGTISFYQLIFSTVHGLYKDRYAYRDSMT 259
Query: 84 DEKYTALRQSRNMRSKCKDLGDALLKYYFNIANDFNKDILVY 125
D L + +R KCK+L + Y +A + IL+Y
Sbjct: 260 DVIVQHLITEQKVRIKCKELVKKIAIYRNRLAIQLPEKILIY 301
>AK223095-1|BAD96815.1| 1182|Homo sapiens WD repeat domain 10
isoform 3 variant protein.
Length = 1182
Score = 31.9 bits (69), Expect = 3.3
Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 6/102 (5%)
Query: 29 IEYGIVKNNNDWI---PITDPEKYVQRGQSGDGEVKPYHELNKEAEFLKK--IVHRDTMN 83
+ G V N W+ YV G DG + Y + L K +RD+M
Sbjct: 253 VRLGTVGEQNSWVWTCQAKPDSNYVVVGCQ-DGTISFYQLIFSTVHGLYKDRYAYRDSMT 311
Query: 84 DEKYTALRQSRNMRSKCKDLGDALLKYYFNIANDFNKDILVY 125
D L + +R KCK+L + Y +A + IL+Y
Sbjct: 312 DVIVQHLITEQKVRIKCKELVKKIAIYRNRLAIQLPEKILIY 353
>AK022525-1|BAB14077.1| 864|Homo sapiens protein ( Homo sapiens
cDNA FLJ12463 fis, clone NT2RM1000772, weakly similar to
VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1. ).
Length = 864
Score = 31.9 bits (69), Expect = 3.3
Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 6/102 (5%)
Query: 29 IEYGIVKNNNDWI---PITDPEKYVQRGQSGDGEVKPYHELNKEAEFLKK--IVHRDTMN 83
+ G V N W+ YV G DG + Y + L K +RD+M
Sbjct: 253 VRLGTVGEQNSWVWTCQAKPDSNYVVVGCQ-DGTISFYQLIFSTVHGLYKDRYAYRDSMT 311
Query: 84 DEKYTALRQSRNMRSKCKDLGDALLKYYFNIANDFNKDILVY 125
D L + +R KCK+L + Y +A + IL+Y
Sbjct: 312 DVIVQHLITEQKVRIKCKELVKKIAIYRNRLAIQLPEKILIY 353
>AK001759-1|BAA91888.1| 993|Homo sapiens protein ( Homo sapiens
cDNA FLJ10897 fis, clone NT2RP5003477, weakly similar to
VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1. ).
Length = 993
Score = 31.9 bits (69), Expect = 3.3
Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 6/102 (5%)
Query: 29 IEYGIVKNNNDWI---PITDPEKYVQRGQSGDGEVKPYHELNKEAEFLKK--IVHRDTMN 83
+ G V N W+ YV G DG + Y + L K +RD+M
Sbjct: 253 VRLGTVGEQNSWVWTCQAKPDSNYVVVGCQ-DGTISFYQLIFSTVHGLYKDRYAYRDSMT 311
Query: 84 DEKYTALRQSRNMRSKCKDLGDALLKYYFNIANDFNKDILVY 125
D L + +R KCK+L + Y +A + IL+Y
Sbjct: 312 DVIVQHLITEQKVRIKCKELVKKIAIYRNRLAIQLPEKILIY 353
>AF302154-1|AAG13415.1| 1241|Homo sapiens SPG protein protein.
Length = 1241
Score = 31.9 bits (69), Expect = 3.3
Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 6/102 (5%)
Query: 29 IEYGIVKNNNDWI---PITDPEKYVQRGQSGDGEVKPYHELNKEAEFLKK--IVHRDTMN 83
+ G V N W+ YV G DG + Y + L K +RD+M
Sbjct: 312 VRLGTVGEQNSWVWTCQAKPDSNYVVVGCQ-DGTISFYQLIFSTVHGLYKDRYAYRDSMT 370
Query: 84 DEKYTALRQSRNMRSKCKDLGDALLKYYFNIANDFNKDILVY 125
D L + +R KCK+L + Y +A + IL+Y
Sbjct: 371 DVIVQHLITEQKVRIKCKELVKKIAIYRNRLAIQLPEKILIY 412
>AF244931-1|AAG15428.1| 1292|Homo sapiens WDR10p-L protein.
Length = 1292
Score = 31.9 bits (69), Expect = 3.3
Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 6/102 (5%)
Query: 29 IEYGIVKNNNDWI---PITDPEKYVQRGQSGDGEVKPYHELNKEAEFLKK--IVHRDTMN 83
+ G V N W+ YV G DG + Y + L K +RD+M
Sbjct: 363 VRLGTVGEQNSWVWTCQAKPDSNYVVVGCQ-DGTISFYQLIFSTVHGLYKDRYAYRDSMT 421
Query: 84 DEKYTALRQSRNMRSKCKDLGDALLKYYFNIANDFNKDILVY 125
D L + +R KCK+L + Y +A + IL+Y
Sbjct: 422 DVIVQHLITEQKVRIKCKELVKKIAIYRNRLAIQLPEKILIY 463
>AF244930-1|AAG15427.1| 1242|Homo sapiens WDR10p protein.
Length = 1242
Score = 31.9 bits (69), Expect = 3.3
Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 6/102 (5%)
Query: 29 IEYGIVKNNNDWI---PITDPEKYVQRGQSGDGEVKPYHELNKEAEFLKK--IVHRDTMN 83
+ G V N W+ YV G DG + Y + L K +RD+M
Sbjct: 312 VRLGTVGEQNSWVWTCQAKPDSNYVVVGCQ-DGTISFYQLIFSTVHGLYKDRYAYRDSMT 370
Query: 84 DEKYTALRQSRNMRSKCKDLGDALLKYYFNIANDFNKDILVY 125
D L + +R KCK+L + Y +A + IL+Y
Sbjct: 371 DVIVQHLITEQKVRIKCKELVKKIAIYRNRLAIQLPEKILIY 412
>AF057694-1|AAC13540.1| 1199|Homo sapiens TBP-associated factor
TAFII150 protein.
Length = 1199
Score = 31.9 bits (69), Expect = 3.3
Identities = 14/48 (29%), Positives = 27/48 (56%)
Query: 247 ININDDLPNYALSRRLTRSMPIKMPRYNNHLPLDPLLAVYLSNYGHYL 294
+N+ LP+Y + ++ I++ + N H+P DP L + YGH++
Sbjct: 837 LNMEKLLPSYRHTITVSCLRAIRVLQKNGHVPSDPALFKSYAEYGHFV 884
>AF040701-1|AAC68502.1| 1189|Homo sapiens TATA binding protein
associated factor protein.
Length = 1189
Score = 31.9 bits (69), Expect = 3.3
Identities = 14/48 (29%), Positives = 27/48 (56%)
Query: 247 ININDDLPNYALSRRLTRSMPIKMPRYNNHLPLDPLLAVYLSNYGHYL 294
+N+ LP+Y + ++ I++ + N H+P DP L + YGH++
Sbjct: 827 LNMEKLLPSYRHTITVSCLRAIRVLQKNGHVPSDPALFKSYAEYGHFV 874
>AF026445-1|AAC02966.1| 1199|Homo sapiens cofactor of initiator
function protein.
Length = 1199
Score = 31.9 bits (69), Expect = 3.3
Identities = 14/48 (29%), Positives = 27/48 (56%)
Query: 247 ININDDLPNYALSRRLTRSMPIKMPRYNNHLPLDPLLAVYLSNYGHYL 294
+N+ LP+Y + ++ I++ + N H+P DP L + YGH++
Sbjct: 837 LNMEKLLPSYRHTITVSCLRAIRVLQKNGHVPSDPALFKSYAEYGHFV 884
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.314 0.135 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,033,378
Number of Sequences: 224733
Number of extensions: 2041196
Number of successful extensions: 3156
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 3153
Number of HSP's gapped (non-prelim): 13
length of query: 335
length of database: 73,234,838
effective HSP length: 90
effective length of query: 245
effective length of database: 53,008,868
effective search space: 12987172660
effective search space used: 12987172660
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 66 (30.7 bits)
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