GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002736-TA|BGIBMGA002736-PA|undefined
         (64 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   1.1  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   1.1  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    21   1.5  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    19   4.6  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    19   6.1  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    18   8.1  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    18   8.1  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    18   8.1  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.0 bits (42), Expect = 1.1
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 24  SIKKENEIVLRIYREENLSHVHFRD 48
           S ++E  +  RI R+ENLS   + +
Sbjct: 280 SSRREFAVSTRILRDENLSQNSYHE 304


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.0 bits (42), Expect = 1.1
 Identities = 7/20 (35%), Positives = 13/20 (65%)

Query: 23  KSIKKENEIVLRIYREENLS 42
           K +KK+ +I+L + +E   S
Sbjct: 697 KKVKKDKDIILNVPKESTQS 716


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 20.6 bits (41), Expect = 1.5
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 5   YTDIDDTNNAVRMPRTAGKSIKKENEIVLRIYREENLSHVHFRDNS 50
           Y  + +    +   RT+ K   +  E   R Y+ EN S+  +R+ S
Sbjct: 252 YEKLHNEKEKLLEERTSRKRYSRSREREQRSYKNEN-SYRKYRETS 296


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 6/11 (54%), Positives = 9/11 (81%)

Query: 27   KENEIVLRIYR 37
            +ENEI+  IY+
Sbjct: 1548 EENEIIFEIYK 1558


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 40  NLSHVHFRD 48
           N  HVHF D
Sbjct: 190 NKQHVHFHD 198


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 8/22 (36%), Positives = 12/22 (54%)

Query: 28  ENEIVLRIYREENLSHVHFRDN 49
           + E+V R  R +N   V+  DN
Sbjct: 257 QKELVRRDSRRKNYGGVYHLDN 278


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)

Query: 39  ENLSHVHFRDNSLRY 53
           E+L H++ RD S  Y
Sbjct: 251 ESLVHLYTRDQSETY 265


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)

Query: 23  KSIKKENEIVLRIYREENLSHVH 45
           KS  +E  + +   RE+N+S +H
Sbjct: 443 KSSIEEANLAVSAEREKNVSLLH 465


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.135    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,195
Number of Sequences: 429
Number of extensions: 764
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 64
length of database: 140,377
effective HSP length: 44
effective length of query: 20
effective length of database: 121,501
effective search space:  2430020
effective search space used:  2430020
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (19.0 bits)
S2: 35 (18.2 bits)