GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002734-TA|BGIBMGA002734-PA|undefined
         (137 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    20   9.2  

>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 6/14 (42%), Positives = 12/14 (85%)

Query: 106 MDSSYHWGFVEEQA 119
           +D+ +H GF++EQ+
Sbjct: 226 IDNLFHNGFMQEQS 239


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.316    0.134    0.465 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,378
Number of Sequences: 317
Number of extensions: 777
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1
length of query: 137
length of database: 114,650
effective HSP length: 51
effective length of query: 86
effective length of database: 98,483
effective search space:  8469538
effective search space used:  8469538
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.7 bits)
S2: 39 (19.8 bits)