BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002731-TA|BGIBMGA002731-PA|undefined
(610 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L24759-1|AAC37560.1| 317|Homo sapiens bone sialoprotein protein. 37 0.24
L09558-1|AAA60549.1| 317|Homo sapiens bone sialoprotein protein. 35 0.96
J05213-1|AAC95490.1| 317|Homo sapiens sialoprotein precursor pr... 35 0.96
BC098568-1|AAH98568.1| 1164|Homo sapiens chromosome 14 open read... 34 1.7
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 33 2.2
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 33 2.2
AF163151-1|AAF42472.1| 1253|Homo sapiens dentin sialophosphoprot... 33 3.9
BC039814-1|AAH39814.1| 320|Homo sapiens zinc finger, RAN-bindin... 32 6.8
AY237538-1|AAP04415.1| 1304|Homo sapiens KIF27C protein. 31 9.0
AL512443-2|CAH70059.1| 320|Homo sapiens zinc finger, RAN-bindin... 31 9.0
AL512443-1|CAH70058.1| 330|Homo sapiens zinc finger, RAN-bindin... 31 9.0
AL136945-1|CAB66879.1| 311|Homo sapiens hypothetical protein pr... 31 9.0
AK222858-1|BAD96578.1| 330|Homo sapiens zinc finger protein 265... 31 9.0
AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens ... 31 9.0
AF283247-1|AAF82603.1| 287|Homo sapiens NPDC-1 protein. 31 9.0
AF065392-1|AAD09747.1| 311|Homo sapiens ZIS2 protein. 31 9.0
AF065391-1|AAD09746.1| 337|Homo sapiens ZIS1 protein. 31 9.0
AB209568-1|BAD92805.1| 316|Homo sapiens zinc finger protein 265... 31 9.0
>L24759-1|AAC37560.1| 317|Homo sapiens bone sialoprotein protein.
Length = 317
Score = 36.7 bits (81), Expect = 0.24
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 9/113 (7%)
Query: 238 KNGDSDMLNNKSEMSCDGASDSSRSGEDMRNVSPSGVWMSGDEDKGRVTRVIGELPIAEY 297
+N +S+ +++E +G S +S E+ S G+E+ V G AE
Sbjct: 161 ENEESEAEVDENEQGINGTSTNSTEAENGNGSSGEDNGEEGEEES-----VTGAN--AEG 213
Query: 298 EGSPRRYGVGTQKTTRSPRPGF-PQRVVTESRDITPP-GSSTAFDYLYEFSET 348
R G GT KTT SP GF P R +PP G +T +Y E+ T
Sbjct: 214 TTETGRQGKGTSKTTTSPNGGFEPTTPPQVYRTTSPPFGKTTTVEYEGEYEYT 266
>L09558-1|AAA60549.1| 317|Homo sapiens bone sialoprotein protein.
Length = 317
Score = 34.7 bits (76), Expect = 0.96
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 9/113 (7%)
Query: 238 KNGDSDMLNNKSEMSCDGASDSSRSGEDMRNVSPSGVWMSGDEDKGRVTRVIGELPIAEY 297
+N +S+ +++E +G S +S E+ S G+E+ VT E E
Sbjct: 161 ENEESEAEVDENEQGINGTSTNSTEAENGNGSSGEDNGEEGEEES--VTGANAE-GTTET 217
Query: 298 EGSPRRYGVGTQKTTRSPRPGF-PQRVVTESRDITPP-GSSTAFDYLYEFSET 348
G G GT KTT SP GF P R +PP G +T +Y E+ T
Sbjct: 218 GGQ----GKGTSKTTTSPNGGFEPTTPPQVYRTTSPPFGKTTTVEYEGEYEYT 266
>J05213-1|AAC95490.1| 317|Homo sapiens sialoprotein precursor
protein.
Length = 317
Score = 34.7 bits (76), Expect = 0.96
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 9/113 (7%)
Query: 238 KNGDSDMLNNKSEMSCDGASDSSRSGEDMRNVSPSGVWMSGDEDKGRVTRVIGELPIAEY 297
+N +S+ +++E +G S +S E+ S G+E+ VT E E
Sbjct: 161 ENEESEAEVDENEQGINGTSTNSTEAENGNGSSGGDNGEEGEEES--VTGANAE-GTTET 217
Query: 298 EGSPRRYGVGTQKTTRSPRPGF-PQRVVTESRDITPP-GSSTAFDYLYEFSET 348
G G GT KTT SP GF P R +PP G +T +Y E+ T
Sbjct: 218 GGQ----GKGTSKTTTSPNGGFEPTTPPQVYRTTSPPFGKTTTVEYEGEYEYT 266
>BC098568-1|AAH98568.1| 1164|Homo sapiens chromosome 14 open reading
frame 102 protein.
Length = 1164
Score = 33.9 bits (74), Expect = 1.7
Identities = 27/120 (22%), Positives = 45/120 (37%), Gaps = 2/120 (1%)
Query: 472 MSLMPVDTQLSDVKGLGIRTQNSE--TRVSIMENELSEMKVQMDASRAGVVTKLPLVEDG 529
M+L P LS+ G + + + S ++ + Q +A+ A V LPL
Sbjct: 1 MALFPAFAGLSEAPDGGSSRKELDWLSNPSFCVGSITSLSQQTEAAPAHVSEGLPLTRSH 60
Query: 530 LSSGHASDNDNNNQMQQTHSVVITEIVENGTSTEXXXXXXXXXXXXXXXXEADTDLETDR 589
L S + ++D N +++QT E + E DTD E D+
Sbjct: 61 LKSESSDESDTNKKLKQTSRKKKKEKKKKRKHQHHKKTKRKHGPSSSSRSETDTDSEKDK 120
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 33.5 bits (73), Expect = 2.2
Identities = 46/218 (21%), Positives = 83/218 (38%), Gaps = 14/218 (6%)
Query: 360 TLPVQTQLNANDEV----VNFQDLDYELKRQTQECPSENGMDGSESEWPQVTEPLDSPHT 415
++PV T A+ E+ D + +Q S DG+ P +E +
Sbjct: 1930 SIPVSTTTVASSEINTLSTTLADTRTPVTTYSQASSSPTTADGTSMPTPAYSEGSTPLTS 1989
Query: 416 VNNHTNFLGLQQQRSVYTEPIVHGLTAEGAWSGSGSPGARRLPFALSTDSSETGSEMSLM 475
+ T + + ++ T P+ A + GS SP ++ SE + ++ M
Sbjct: 1990 MPLSTTLVVSSEASTLSTTPVDTSTPATTSTEGSSSPTTAGGTSIQTSTPSERTTPLAGM 2049
Query: 476 PVDTQL---SDVKGLGIRTQNSETRV-------SIMENELSEMKVQMDASRAGVVTKLPL 525
PV T L S+ L +S+T+V S E S M + + + ++T +PL
Sbjct: 2050 PVSTTLVVSSEGNTLSTTPVDSKTQVTNSTEASSSATAEGSSMTISAPSEGSPLLTSIPL 2109
Query: 526 VEDGLSSGHASDNDNNNQMQQTHSVVITEIVENGTSTE 563
++S AS + + TE+ + TE
Sbjct: 2110 STTPVASPEASTLSTTPVDSNSPVITSTEVSSSPIPTE 2147
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 33.5 bits (73), Expect = 2.2
Identities = 46/218 (21%), Positives = 83/218 (38%), Gaps = 14/218 (6%)
Query: 360 TLPVQTQLNANDEV----VNFQDLDYELKRQTQECPSENGMDGSESEWPQVTEPLDSPHT 415
++PV T A+ E+ D + +Q S DG+ P +E +
Sbjct: 1930 SIPVSTTTVASSEINTLSTTLADTRTPVTTYSQASSSPTTADGTSMPTPAYSEGSTPLTS 1989
Query: 416 VNNHTNFLGLQQQRSVYTEPIVHGLTAEGAWSGSGSPGARRLPFALSTDSSETGSEMSLM 475
+ T + + ++ T P+ A + GS SP ++ SE + ++ M
Sbjct: 1990 MPLSTTLVVSSEASTLSTTPVDTSTPATTSTEGSSSPTTAGGTSIQTSTPSERTTPLAGM 2049
Query: 476 PVDTQL---SDVKGLGIRTQNSETRV-------SIMENELSEMKVQMDASRAGVVTKLPL 525
PV T L S+ L +S+T+V S E S M + + + ++T +PL
Sbjct: 2050 PVSTTLVVSSEGNTLSTTPVDSKTQVTNSTEASSSATAEGSSMTISAPSEGSPLLTSIPL 2109
Query: 526 VEDGLSSGHASDNDNNNQMQQTHSVVITEIVENGTSTE 563
++S AS + + TE+ + TE
Sbjct: 2110 STTPVASPEASTLSTTPVDSNSPVITSTEVSSSPIPTE 2147
>AF163151-1|AAF42472.1| 1253|Homo sapiens dentin sialophosphoprotein
precursor protein.
Length = 1253
Score = 32.7 bits (71), Expect = 3.9
Identities = 35/157 (22%), Positives = 58/157 (36%), Gaps = 6/157 (3%)
Query: 124 DTIDHGVDNINNEISIHRLNSEQKKIIRHTSPTYTNGDRNPIEQNSMGIPKNSSPILDPH 183
D+ D D+ +E +S+ ++S + N D + +S NSS D
Sbjct: 618 DSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSS-----NSSDSSDSS 672
Query: 184 KTTDVSTKSSPIAVVADGEVMVLDENDDWKGLRTEPDPSDN-DIDMSVKRTIDHIKNGDS 242
++D S+ S + ++ D D SD+ D D S + + DS
Sbjct: 673 DSSDSSSSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDS 732
Query: 243 DMLNNKSEMSCDGASDSSRSGEDMRNVSPSGVWMSGD 279
D N+ +SDSS S + + S S D
Sbjct: 733 DSSNSSDSSDSSDSSDSSNSSDSSDSSDSSNSSDSSD 769
Score = 31.5 bits (68), Expect = 9.0
Identities = 31/142 (21%), Positives = 57/142 (40%), Gaps = 2/142 (1%)
Query: 131 DNINNEISIHRLNSEQKKIIRHTSPTYTNGDRNPIEQNSMGIPKNSSPILDPHKTTDVST 190
D+ N+ S NS ++S + + D + +S NSS + ++D S+
Sbjct: 778 DSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSD-SS 836
Query: 191 KSSPIAVVADGEVMVLDENDDWKGLRTEPDPSDNDIDMSVKRTIDHIKNGDSDMLNNKSE 250
SS + +D ++ + D SD+ + + D + DS+ +N S+
Sbjct: 837 NSSDSSDSSDSSDSSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSNESSNSSD 896
Query: 251 MSCDGASDSSRSGEDMRNVSPS 272
S D ++ S D N S S
Sbjct: 897 -SSDSSNSSDSDSSDSSNSSDS 917
>BC039814-1|AAH39814.1| 320|Homo sapiens zinc finger, RAN-binding
domain containing 2 protein.
Length = 320
Score = 31.9 bits (69), Expect = 6.8
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 207 DENDDWKGLRTEPDPSDNDIDMSVKRTIDHIKNGDSDMLNNKSEMSCDGASDSSRSGEDM 266
DE++D + + D ++D D+S K +D + DS+ KS S SS S
Sbjct: 159 DEDEDLSKYKLDEDEDEDDADLS-KYNLDASEEEDSN--KKKSNRRSRSKSGSSHSRSSS 215
Query: 267 RNVSPS 272
R+ SPS
Sbjct: 216 RSSSPS 221
>AY237538-1|AAP04415.1| 1304|Homo sapiens KIF27C protein.
Length = 1304
Score = 31.5 bits (68), Expect = 9.0
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 484 VKGLGIRTQNSETRVSIMENELSEMKVQMDASRAGVVTKL 523
+K L + TR++++E ELSE VQ+ S A TK+
Sbjct: 880 IKALNTDSLKISTRLNLLEQELSEKNVQLQTSTAEEKTKI 919
>AL512443-2|CAH70059.1| 320|Homo sapiens zinc finger, RAN-binding
domain containing 2 protein.
Length = 320
Score = 31.5 bits (68), Expect = 9.0
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 207 DENDDWKGLRTEPDPSDNDIDMSVKRTIDHIKNGDSDMLNNKSEMSCDGASDSSRSGEDM 266
DE++D + + D ++D D+S K +D + DS+ KS S SS S
Sbjct: 159 DEDEDLSKYKLDEDEDEDDADLS-KYNLDASEEEDSN--KKKSNRRSRSKSRSSHSRSSS 215
Query: 267 RNVSPS 272
R+ SPS
Sbjct: 216 RSSSPS 221
>AL512443-1|CAH70058.1| 330|Homo sapiens zinc finger, RAN-binding
domain containing 2 protein.
Length = 330
Score = 31.5 bits (68), Expect = 9.0
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 207 DENDDWKGLRTEPDPSDNDIDMSVKRTIDHIKNGDSDMLNNKSEMSCDGASDSSRSGEDM 266
DE++D + + D ++D D+S K +D + DS+ KS S SS S
Sbjct: 159 DEDEDLSKYKLDEDEDEDDADLS-KYNLDASEEEDSN--KKKSNRRSRSKSRSSHSRSSS 215
Query: 267 RNVSPS 272
R+ SPS
Sbjct: 216 RSSSPS 221
>AL136945-1|CAB66879.1| 311|Homo sapiens hypothetical protein
protein.
Length = 311
Score = 31.5 bits (68), Expect = 9.0
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 207 DENDDWKGLRTEPDPSDNDIDMSVKRTIDHIKNGDSDMLNNKSEMSCDGASDSSRSGEDM 266
DE++D + + D ++D D+S K +D + DS+ KS S SS S
Sbjct: 159 DEDEDLSKYKLDEDEDEDDADLS-KYNLDASEEEDSN--KKKSNRRSRSKSRSSHSRSSS 215
Query: 267 RNVSPS 272
R+ SPS
Sbjct: 216 RSSSPS 221
>AK222858-1|BAD96578.1| 330|Homo sapiens zinc finger protein 265
isoform 1 variant protein.
Length = 330
Score = 31.5 bits (68), Expect = 9.0
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 207 DENDDWKGLRTEPDPSDNDIDMSVKRTIDHIKNGDSDMLNNKSEMSCDGASDSSRSGEDM 266
DE++D + + D ++D D+S K +D + DS+ KS S SS S
Sbjct: 159 DEDEDLSKYKLDEDEDEDDADLS-KYNLDASEEEDSN--KKKSNRRSRSKSRSSHSRSSS 215
Query: 267 RNVSPS 272
R+ SPS
Sbjct: 216 RSSSPS 221
>AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens
cDNA FLJ35107 fis, clone PLACE6006871, moderately
similar to SUPPRESSOR PROTEIN SRP40. ).
Length = 258
Score = 31.5 bits (68), Expect = 9.0
Identities = 22/110 (20%), Positives = 42/110 (38%)
Query: 153 TSPTYTNGDRNPIEQNSMGIPKNSSPILDPHKTTDVSTKSSPIAVVADGEVMVLDENDDW 212
+SP+ ++ +P +S P +SS P ++ S+ SSP + + +
Sbjct: 63 SSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNSSSSSSSSSPSSSS 122
Query: 213 KGLRTEPDPSDNDIDMSVKRTIDHIKNGDSDMLNNKSEMSCDGASDSSRS 262
+ P S + S + + S ++ S S +S SS S
Sbjct: 123 SSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSS 172
>AF283247-1|AAF82603.1| 287|Homo sapiens NPDC-1 protein.
Length = 287
Score = 31.5 bits (68), Expect = 9.0
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Query: 4 VTLRADGAGDSTPGSDVGERIT----RLFPKCRPKNMQHQHDRL----NSGLEARDANNA 55
+T +AD A PGS RI+ RL + QHQ ++ ++ + A
Sbjct: 177 LTQKADYATAKAPGSPAAPRISPGDQRLAQSAEMYHYQHQRQQMLCLERHKEPPKELDTA 236
Query: 56 SSDEERGDGQLVILNSKG 73
SSDEE DG + + G
Sbjct: 237 SSDEENEDGDFTVYDCPG 254
>AF065392-1|AAD09747.1| 311|Homo sapiens ZIS2 protein.
Length = 311
Score = 31.5 bits (68), Expect = 9.0
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 207 DENDDWKGLRTEPDPSDNDIDMSVKRTIDHIKNGDSDMLNNKSEMSCDGASDSSRSGEDM 266
DE++D + + D ++D D+S K +D + DS+ KS S SS S
Sbjct: 159 DEDEDLSKYKLDEDEDEDDADLS-KYNLDASEEEDSN--KKKSNRRSRSKSRSSHSRSSS 215
Query: 267 RNVSPS 272
R+ SPS
Sbjct: 216 RSSSPS 221
>AF065391-1|AAD09746.1| 337|Homo sapiens ZIS1 protein.
Length = 337
Score = 31.5 bits (68), Expect = 9.0
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 207 DENDDWKGLRTEPDPSDNDIDMSVKRTIDHIKNGDSDMLNNKSEMSCDGASDSSRSGEDM 266
DE++D + + D ++D D+S K +D + DS+ KS S SS S
Sbjct: 159 DEDEDLSKYKLDEDEDEDDADLS-KYNLDASEEEDSN--KKKSNRRSRSKSRSSHSRSSS 215
Query: 267 RNVSPS 272
R+ SPS
Sbjct: 216 RSSSPS 221
>AB209568-1|BAD92805.1| 316|Homo sapiens zinc finger protein 265
isoform 1 variant protein.
Length = 316
Score = 31.5 bits (68), Expect = 9.0
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 207 DENDDWKGLRTEPDPSDNDIDMSVKRTIDHIKNGDSDMLNNKSEMSCDGASDSSRSGEDM 266
DE++D + + D ++D D+S K +D + DS+ KS S SS S
Sbjct: 161 DEDEDLSKYKLDEDEDEDDADLS-KYNLDASEEEDSN--KKKSNRRSRSKSRSSHSRSSS 217
Query: 267 RNVSPS 272
R+ SPS
Sbjct: 218 RSSSPS 223
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.309 0.128 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,446,901
Number of Sequences: 224733
Number of extensions: 3953223
Number of successful extensions: 7648
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 7603
Number of HSP's gapped (non-prelim): 60
length of query: 610
length of database: 73,234,838
effective HSP length: 94
effective length of query: 516
effective length of database: 52,109,936
effective search space: 26888726976
effective search space used: 26888726976
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 68 (31.5 bits)
- SilkBase 1999-2023 -