GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002729-TA|BGIBMGA002729-PA|IPR003439|ABC transporter
related
         (288 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    23   3.5  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    23   3.5  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   4.6  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   4.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   4.6  

>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 174 INDTSEVLVNVQILDSLNWMEVFDRMEKLKTNNVQVYSYVVTEI 217
           I DTS+ L     + + N  E+F+R+  L  + +   S  V  I
Sbjct: 224 IPDTSKQLAAALGMQTTNEKEIFERLSALPVDKLLQISEKVANI 267


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 174 INDTSEVLVNVQILDSLNWMEVFDRMEKLKTNNVQVYSYVVTEI 217
           I DTS+ L     + + N  E+F+R+  L  + +   S  V  I
Sbjct: 226 IPDTSKQLAAALGMQTTNEKEIFERLSALPVDKLLQISEEVANI 269


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 174 INDTSEVLVNVQILDSLNWMEVFDRMEKLKTNNVQVYSYVVTEI 217
           I DTS+ L     + + N  E+F+R+  L  + +   S  V  I
Sbjct: 224 IPDTSKQLAAALGMQTTNEKEIFERLSVLPVDKLLQISEEVANI 267


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/36 (27%), Positives = 18/36 (50%)

Query: 21  YVVHNVYLGMRKGEIVALSGLKRHGRLTFCQVLAGH 56
           +++ NV+     GE++A+ G    G+ T    L  H
Sbjct: 92  HILKNVFGVAYPGELLAILGSSGAGKTTLLNTLTFH 127


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/36 (27%), Positives = 18/36 (50%)

Query: 21  YVVHNVYLGMRKGEIVALSGLKRHGRLTFCQVLAGH 56
           +++ NV+     GE++A+ G    G+ T    L  H
Sbjct: 92  HILKNVFGVAYPGELLAILGSSGAGKTTLLNTLTFH 127


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.137    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,938
Number of Sequences: 317
Number of extensions: 2956
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 5
length of query: 288
length of database: 114,650
effective HSP length: 56
effective length of query: 232
effective length of database: 96,898
effective search space: 22480336
effective search space used: 22480336
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 43 (21.4 bits)