Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002727-TA|BGIBMGA002727-PA|undefined
(116 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6LKD6 Cluster: Putative uncharacterized protein; n=4; ... 36 0.23
UniRef50_A5ZLZ7 Cluster: Putative uncharacterized protein; n=1; ... 35 0.40
UniRef50_Q4Y6W9 Cluster: Putative uncharacterized protein; n=2; ... 35 0.40
UniRef50_Q117N4 Cluster: Branched-chain amino acid aminotransfer... 34 0.53
UniRef50_Q896U3 Cluster: Ribose transport ATP-binding protein rb... 34 0.69
UniRef50_A4XJJ2 Cluster: ABC transporter related; n=1; Caldicell... 34 0.69
UniRef50_A5FFE9 Cluster: Putative uncharacterized protein; n=1; ... 33 0.92
UniRef50_Q9X051 Cluster: Ribose import ATP-binding protein rbsA ... 33 1.2
UniRef50_Q89CC6 Cluster: ABC transporter ATP-binding protein; n=... 33 1.6
UniRef50_Q7WFW2 Cluster: ABC transport protein, ATP-binding comp... 33 1.6
UniRef50_Q2RKM0 Cluster: ABC transporter related; n=1; Moorella ... 32 2.1
UniRef50_Q1FJF7 Cluster: Putative uncharacterized protein precur... 32 2.1
UniRef50_Q6NKE2 Cluster: ABC transport system ATP-binding protei... 32 2.8
UniRef50_A6L2D4 Cluster: Putative uncharacterized protein; n=1; ... 32 2.8
UniRef50_Q28P50 Cluster: Ribose import ATP-binding protein rbsA;... 32 2.8
UniRef50_A4M7U0 Cluster: ABC transporter related precursor; n=1;... 31 3.7
UniRef50_A3I8Q3 Cluster: ABC transporter; n=1; Bacillus sp. B149... 31 3.7
UniRef50_A0EHM3 Cluster: Chromosome undetermined scaffold_97, wh... 31 3.7
UniRef50_A5DRC6 Cluster: Putative uncharacterized protein; n=1; ... 31 3.7
UniRef50_A5Z737 Cluster: Putative uncharacterized protein; n=2; ... 31 4.9
UniRef50_A2FBN5 Cluster: AGC family protein kinase; n=1; Trichom... 31 4.9
UniRef50_Q98MG3 Cluster: Mll0592 protein; n=3; Rhizobiales|Rep: ... 31 6.5
UniRef50_A4JHA9 Cluster: Type IV secretory pathway VirD4 compone... 31 6.5
UniRef50_A0C0F1 Cluster: Chromosome undetermined scaffold_14, wh... 31 6.5
UniRef50_A5DQV5 Cluster: Putative uncharacterized protein; n=1; ... 31 6.5
UniRef50_Q9K6J9 Cluster: Ribose import ATP-binding protein rbsA;... 31 6.5
UniRef50_Q9WYG2 Cluster: Phosphoglycerate dehydrogenase, putativ... 30 8.6
UniRef50_Q5WIU6 Cluster: Multidrug ABC transporter ATP-binding p... 30 8.6
UniRef50_Q2SS72 Cluster: Sodium:solute symporter (SSS) family; n... 30 8.6
UniRef50_Q1YUY5 Cluster: Zinc ABC transporter, ATP-binding prote... 30 8.6
UniRef50_Q1GM89 Cluster: ABC transporter-related protein; n=2; A... 30 8.6
UniRef50_Q186L3 Cluster: Probable cation-transporting ATPase; n=... 30 8.6
UniRef50_A7BS86 Cluster: Cation transport ATPase; n=4; Beggiatoa... 30 8.6
UniRef50_A6VW58 Cluster: Sensor protein; n=2; Marinomonas|Rep: S... 30 8.6
UniRef50_Q23VE6 Cluster: Putative uncharacterized protein; n=1; ... 30 8.6
UniRef50_Q6FN93 Cluster: Similar to sp|Q12451 Saccharomyces cere... 30 8.6
UniRef50_Q5K9Y2 Cluster: Putative uncharacterized protein; n=1; ... 30 8.6
UniRef50_Q398W2 Cluster: Ribose import ATP-binding protein rbsA ... 30 8.6
>UniRef50_A6LKD6 Cluster: Putative uncharacterized protein; n=4;
Thermosipho melanesiensis BI429|Rep: Putative
uncharacterized protein - Thermosipho melanesiensis
BI429
Length = 517
Score = 35.5 bits (78), Expect = 0.23
Identities = 22/81 (27%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Query: 24 FKSVEGKDKLCKI--EAPSIKEREKLQEVDELVAKAISFNEVTKSIMGIP-VLSNVTMDL 80
+ ++E ++ K+ EA E+EK++EV+ + K++ N++ + I I ++S++ +L
Sbjct: 355 YPNIEVRNSFSKLILEANYGVEKEKIKEVNREIIKSLEKNDIRRMIEEIKRIISSIPYNL 414
Query: 81 YRGEYSVLFAERIQHKMMLTL 101
+RGE ER H ++ T+
Sbjct: 415 HRGE------ERYYHSLIYTI 429
>UniRef50_A5ZLZ7 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus obeum ATCC 29174|Rep: Putative
uncharacterized protein - Ruminococcus obeum ATCC 29174
Length = 499
Score = 34.7 bits (76), Expect = 0.40
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 58 ISFNEVTKSIMGIPVLSNVTMDLYRGEYSVLFAERIQHKMMLTLEDLLTGI 108
+ + KS G+PVL NV + + +GE L E K TL ++LTG+
Sbjct: 4 LQMKNICKSFSGVPVLKNVQLTVEKGEVHALLGENGAGKS--TLMNVLTGV 52
>UniRef50_Q4Y6W9 Cluster: Putative uncharacterized protein; n=2;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 1141
Score = 34.7 bits (76), Expect = 0.40
Identities = 18/53 (33%), Positives = 34/53 (64%), Gaps = 4/53 (7%)
Query: 31 DKLCKIEAPSIKEREKLQEVDELVAKAIS--FNEVTKSIMGIPVLSNVTMDLY 81
D++ KI+ IKE+++L + +++ K IS F ++ KS M P+ +N+ + LY
Sbjct: 646 DQIVKIKKKKIKEKKQLLKKKKILIKNISYIFTKIIKSFM--PIYNNIILSLY 696
>UniRef50_Q117N4 Cluster: Branched-chain amino acid
aminotransferase; n=2; Oscillatoriales|Rep:
Branched-chain amino acid aminotransferase -
Trichodesmium erythraeum (strain IMS101)
Length = 355
Score = 34.3 bits (75), Expect = 0.53
Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 41 IKEREKLQEVDELVAKAISFNEVTKSI-MGIPV-LSNVTMDLYRGEYSVL---FAERIQH 95
+K E+L +DE VAKA ++++ MG ++++++ Y+G+ +L +
Sbjct: 273 VKVEERLISIDE-VAKAYEAGNISEAFGMGTAATIAHISVINYQGKDMILPPVDERKYAS 331
Query: 96 KMMLTLEDLLTGIVIDPYCYI 116
+++ LED+ TG V DPY +I
Sbjct: 332 QVLQKLEDIKTGKVTDPYGWI 352
>UniRef50_Q896U3 Cluster: Ribose transport ATP-binding protein rbsA;
n=1; Clostridium tetani|Rep: Ribose transport
ATP-binding protein rbsA - Clostridium tetani
Length = 501
Score = 33.9 bits (74), Expect = 0.69
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 58 ISFNEVTKSIMGIPVLSNVTMDLYRGEYSVLFAERIQHKMMLTLEDLLTGI 108
+S ++TKS G+ L N ++L +GE VL E K TL +L G+
Sbjct: 7 LSMEDITKSFPGVKALKNANLELRKGEVHVLLGENGAGKS--TLMKILGGV 55
>UniRef50_A4XJJ2 Cluster: ABC transporter related; n=1;
Caldicellulosiruptor saccharolyticus DSM 8903|Rep: ABC
transporter related - Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903)
Length = 303
Score = 33.9 bits (74), Expect = 0.69
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 34 CKIEAPSIKEREKLQE--VDELVAKAISFNEVTKSIMGIPVLSNVTMDLYRGE-YSVL 88
C + + K +EK++ V + KAI ++ KSI G +L + +++Y GE YS+L
Sbjct: 10 CNNKQNNSKNKEKIRNWGVTKFKMKAIEIKKLKKSINGKLILKEINLNIYEGEIYSLL 67
>UniRef50_A5FFE9 Cluster: Putative uncharacterized protein; n=1;
Flavobacterium johnsoniae UW101|Rep: Putative
uncharacterized protein - Flavobacterium johnsoniae
UW101
Length = 790
Score = 33.5 bits (73), Expect = 0.92
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 36 IEAPSIKEREKLQEVDELVAKAISFNEVTKSIMGIPVLSNVTMDLYRGEYSVLF 89
I SI REKL EVD+L+ + +S + T +++ + V + +R E +++F
Sbjct: 39 IAGKSIIFREKLIEVDQLLKRKVSSDNYTPTVLRLKVNEDALAKRFRKEIALIF 92
>UniRef50_Q9X051 Cluster: Ribose import ATP-binding protein rbsA 2;
n=9; Bacteria|Rep: Ribose import ATP-binding protein
rbsA 2 - Thermotoga maritima
Length = 523
Score = 33.1 bits (72), Expect = 1.2
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 63 VTKSIMGIPVLSNVTMDLYRGEYSVLFAERIQHKMMLTLEDLLTGIVID 111
+TK+ G+ ++NVT+ +Y+GE L E K TL +L G+ D
Sbjct: 18 ITKTFPGVIAVNNVTLQIYKGEVCALVGENGAGKS--TLMKILAGVYPD 64
>UniRef50_Q89CC6 Cluster: ABC transporter ATP-binding protein; n=6;
Proteobacteria|Rep: ABC transporter ATP-binding protein
- Bradyrhizobium japonicum
Length = 498
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 58 ISFNEVTKSIMGIPVLSNVTMDLYRGEYSVLFAERIQHKMMLTLEDLLTGIV 109
+S + TK G+P + V DL RGE L E K TL ++ G+V
Sbjct: 6 LSLRKATKLYAGVPAIDGVDFDLRRGEIHALVGENGAGKS--TLTKVMAGVV 55
>UniRef50_Q7WFW2 Cluster: ABC transport protein, ATP-binding
component; n=3; Bordetella|Rep: ABC transport protein,
ATP-binding component - Bordetella bronchiseptica
(Alcaligenes bronchisepticus)
Length = 375
Score = 32.7 bits (71), Expect = 1.6
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 54 VAKAISFNEVTKSIMGIPVLSNVTMDLYRGEYSVLFAE 91
++ AI N V+KS G P+L ++++ + GE+ V+ E
Sbjct: 4 ISTAIQLNSVSKSYGGSPILDDISLAIAPGEFVVILGE 41
>UniRef50_Q2RKM0 Cluster: ABC transporter related; n=1; Moorella
thermoacetica ATCC 39073|Rep: ABC transporter related -
Moorella thermoacetica (strain ATCC 39073)
Length = 492
Score = 32.3 bits (70), Expect = 2.1
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 56 KAISFNEVTKSIMGIPVLSNVTMDLYRGEYSVLFAERIQHKMMLTLEDLLTGIVID 111
K + + K +PVL V DLY GE + + K TL +L G++ D
Sbjct: 3 KVLELKNIVKRYGQVPVLKGVDFDLYAGEVHAIVGQNGAGKS--TLMKILAGVITD 56
>UniRef50_Q1FJF7 Cluster: Putative uncharacterized protein
precursor; n=1; Clostridium phytofermentans ISDg|Rep:
Putative uncharacterized protein precursor - Clostridium
phytofermentans ISDg
Length = 401
Score = 32.3 bits (70), Expect = 2.1
Identities = 17/84 (20%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 23 LFKSVEGK-DKLCKIEAPSIKEREKLQEVDELVAKAISFNEVTKSIMGIPVLSNVTMDLY 81
+F+ +E K D + +++A +K+++ L++ D + ++ K + +P L+ LY
Sbjct: 147 IFRGLEEKRDMISELQALDMKQKQLLKKTDNTLLDVLNALSDNKRNLLLPYLTEDNQSLY 206
Query: 82 RGEYSVLFAERIQHKMMLTLEDLL 105
Y+V + + + ++ LL
Sbjct: 207 ISGYAVFKGDSLYQYLTTSMSSLL 230
>UniRef50_Q6NKE2 Cluster: ABC transport system ATP-binding protein;
n=2; Corynebacterium|Rep: ABC transport system
ATP-binding protein - Corynebacterium diphtheriae
Length = 233
Score = 31.9 bits (69), Expect = 2.8
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 54 VAKAISFNEVTKSIMGIPVLSNVTMDLYRGEYSVLFAERIQHKMMLTLEDLLTGIV 109
++ I NEV+KS G VL+NV+ D+ GE L K TL +L G++
Sbjct: 1 MSTTIRVNEVSKSFHGQHVLNNVSCDIRPGEVHALLGRNGAGKS--TLFSILLGLI 54
>UniRef50_A6L2D4 Cluster: Putative uncharacterized protein; n=1;
Bacteroides vulgatus ATCC 8482|Rep: Putative
uncharacterized protein - Bacteroides vulgatus (strain
ATCC 8482 / DSM 1447 / NCTC 11154)
Length = 423
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/77 (23%), Positives = 36/77 (46%)
Query: 35 KIEAPSIKEREKLQEVDELVAKAISFNEVTKSIMGIPVLSNVTMDLYRGEYSVLFAERIQ 94
+I S+K + ++Q V++++ K I + K I+ P NV DL+ Y I
Sbjct: 260 RIGGKSLKVKPEIQYVEKIIEKVIEKPIIMKQIVETPSQPNVLCDLFNNIYFEFDKTEIT 319
Query: 95 HKMMLTLEDLLTGIVID 111
K ++++ ++ D
Sbjct: 320 PKAATIIDEIAQIMLTD 336
>UniRef50_Q28P50 Cluster: Ribose import ATP-binding protein rbsA;
n=17; Proteobacteria|Rep: Ribose import ATP-binding
protein rbsA - Jannaschia sp. (strain CCS1)
Length = 516
Score = 31.9 bits (69), Expect = 2.8
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 63 VTKSIMGIPVLSNVTMDLYRGEYSVLFAERIQHKMMLTLEDLLTGI 108
+TK+ G+ L+ V+++LY GE + L E K T+ +LTGI
Sbjct: 19 ITKTFPGVKALNAVSLELYPGEVTALIGENGAGKS--TIVKVLTGI 62
>UniRef50_A4M7U0 Cluster: ABC transporter related precursor; n=1;
Petrotoga mobilis SJ95|Rep: ABC transporter related
precursor - Petrotoga mobilis SJ95
Length = 525
Score = 31.5 bits (68), Expect = 3.7
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 41 IKEREKLQEVDELVAK-AISFNEVTKSIMGIPVLSNVTMDLYRGEYSVLFAERIQHKMML 99
I +R L+ DE+ + ++ +TK+ G+ L+NV +L GE L E K
Sbjct: 9 ILKRGGLKVADEINSSYSVIMKNITKTFPGVVALANVNFELEEGEVKGLVGENGAGKS-- 66
Query: 100 TLEDLLTG 107
TL +LTG
Sbjct: 67 TLIKILTG 74
>UniRef50_A3I8Q3 Cluster: ABC transporter; n=1; Bacillus sp.
B14905|Rep: ABC transporter - Bacillus sp. B14905
Length = 551
Score = 31.5 bits (68), Expect = 3.7
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 52 ELVAKAISFNEVTKSIMGIPVLSNVTMDLYRGE 84
E+ + N ++KS +G P+LS +TM + RG+
Sbjct: 7 EIEKMILQLNGISKSYLGDPILSKITMKMERGD 39
>UniRef50_A0EHM3 Cluster: Chromosome undetermined scaffold_97, whole
genome shotgun sequence; n=4; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_97, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 3613
Score = 31.5 bits (68), Expect = 3.7
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 23 LFKSVEGKDKLCKIEAPSIKE---REKLQEVDELVAKAISFNEVTKSIMGI 70
+F ++ +D + + +IKE KL E+D +AK + F E TK MG+
Sbjct: 1341 VFPNINSQDIIYEKLTNAIKEVLQSMKLSEIDNQIAKILQFYEATKQRMGV 1391
>UniRef50_A5DRC6 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 790
Score = 31.5 bits (68), Expect = 3.7
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 20 NSILFKSVEGKDKLCKIEAPSIKEREKLQEVDELVAKAIS 59
N ++ + V+ +K K+EAP +KE+E+ +E+ K S
Sbjct: 566 NDVISEDVDQDEKDIKVEAPDVKEKEEENPTEEIKKKGES 605
>UniRef50_A5Z737 Cluster: Putative uncharacterized protein; n=2;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 498
Score = 31.1 bits (67), Expect = 4.9
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 54 VAKAISFNEVTKSIMGIPVLSNVTMDLYRGEYSVLFAERIQHKMMLTLEDLLTGI 108
+AKA+ F ++ K G+ VL +++ + GE L E K TL ++L G+
Sbjct: 1 MAKAVEFVKINKRFPGVHVLKDISFSVEEGEVHALLGENGAGKS--TLLNILHGV 53
>UniRef50_A2FBN5 Cluster: AGC family protein kinase; n=1;
Trichomonas vaginalis G3|Rep: AGC family protein kinase
- Trichomonas vaginalis G3
Length = 696
Score = 31.1 bits (67), Expect = 4.9
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 32 KLCKIEAPSIKEREKLQEVDELVAKAISFNEVTKSIMGIPVLSNVTMDLYRGEYSVLFAE 91
+LC + IK+ E +VD+L K + E + ++SN+ +L+ S L
Sbjct: 18 RLCSLLQNEIKDHENPSDVDKLKMKVVKQVEACINSTYSQLISNI--ELFTSGLSKLLPN 75
Query: 92 RIQHKMMLTLEDLLTGIV 109
I+ K T E +L I+
Sbjct: 76 LIEAKQSETTEKILKSIL 93
>UniRef50_Q98MG3 Cluster: Mll0592 protein; n=3; Rhizobiales|Rep:
Mll0592 protein - Rhizobium loti (Mesorhizobium loti)
Length = 681
Score = 30.7 bits (66), Expect = 6.5
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 7 IGQDRAIGGQMSWNSILFKSVEGKDKLCKIEAPSIKEREKLQE--VDELVAKAISFNEVT 64
IG RA GQ S IL + E + + K+E ++ER +QE + E A A ++T
Sbjct: 459 IGTPRAANGQNSIEQILIQLRERQIAVEKVETYKLQERAAIQERTLREKEALAEQQAKIT 518
Query: 65 KSIMGIPVLSN 75
S + I + N
Sbjct: 519 TSALTIEISEN 529
>UniRef50_A4JHA9 Cluster: Type IV secretory pathway VirD4
components-like protein; n=1; Burkholderia vietnamiensis
G4|Rep: Type IV secretory pathway VirD4 components-like
protein - Burkholderia vietnamiensis (strain G4 / LMG
22486) (Burkholderiacepacia (strain R1808))
Length = 747
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 31 DKLCKIEAPSIKEREKLQ-EVDELVAKAISFNE 62
D+L KI+ +IKEREKL+ E++EL + E
Sbjct: 638 DRLAKIDKDNIKEREKLEYEIEELQQLKLELGE 670
>UniRef50_A0C0F1 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_14,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1241
Score = 30.7 bits (66), Expect = 6.5
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 23 LFKSVEGKDKLCKIEAPSIKEREKLQEVDELVAKAISFNEVTKSIMGIPVLSNVTMDLYR 82
LF D+ C+I+ P I E+E L E EL K ++ S+ G L+N T++
Sbjct: 630 LFLDKSFADQQCQIK-PEINEQEILTEQIELQEKNTQTEQIESSLSGSMWLNNDTINSKE 688
Query: 83 GEY 85
+Y
Sbjct: 689 DQY 691
>UniRef50_A5DQV5 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 552
Score = 30.7 bits (66), Expect = 6.5
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Query: 32 KLCKIEAPSIKEREKLQEVDELVAKAISFNEVTKSIMGIPVLSNVTMDLYRGEYSVLFAE 91
KLC + ++ LQ + L I N +++G+ +L + LY G+ +V+
Sbjct: 245 KLCAFPVQYCRSKQALQHLKPLTRSNILINGAD-TLLGVTLLQVLCSSLYSGDITVILVI 303
Query: 92 RIQHKMMLTLEDLLTGIVIDP 112
R +T +L+ + DP
Sbjct: 304 RESSSQYMT--ELVNKLTKDP 322
>UniRef50_Q9K6J9 Cluster: Ribose import ATP-binding protein rbsA;
n=29; Bacilli|Rep: Ribose import ATP-binding protein
rbsA - Bacillus halodurans
Length = 499
Score = 30.7 bits (66), Expect = 6.5
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 58 ISFNEVTKSIMGIPVLSNVTMDLYRGEYSVLFAERIQHKMMLTLEDLLTGI 108
+ + KS G PVL +V+ L +GE L E K TL +LTGI
Sbjct: 3 VEMTGIHKSFSGNPVLKDVSFTLEKGEIHALMGENGAGKS--TLMKILTGI 51
>UniRef50_Q9WYG2 Cluster: Phosphoglycerate dehydrogenase, putative;
n=2; Thermotoga|Rep: Phosphoglycerate dehydrogenase,
putative - Thermotoga maritima
Length = 327
Score = 30.3 bits (65), Expect = 8.6
Identities = 15/58 (25%), Positives = 31/58 (53%)
Query: 17 MSWNSILFKSVEGKDKLCKIEAPSIKEREKLQEVDELVAKAISFNEVTKSIMGIPVLS 74
+ N +++ KD + +EA + + E+L + + V+ + NE TK+++G LS
Sbjct: 159 LGMNVLVYDPYVSKDSVRLLEATPVDDLEQLLKESDFVSLHVPLNESTKNMIGERELS 216
>UniRef50_Q5WIU6 Cluster: Multidrug ABC transporter ATP-binding
protein; n=4; Bacillus|Rep: Multidrug ABC transporter
ATP-binding protein - Bacillus clausii (strain KSM-K16)
Length = 309
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 58 ISFNEVTKSIMGIPVLSNVTMDLYRGEYSVLFAERIQHKMMLTLEDLLTGIVIDPY 113
+ ++VTK I G V+SNVTM + +GE L K ++ +LT +V Y
Sbjct: 5 VRLHDVTKFIAGHEVVSNVTMSVRKGEIYGLLGPNGSGKTVIM--KMLTNLVKPSY 58
>UniRef50_Q2SS72 Cluster: Sodium:solute symporter (SSS) family; n=2;
Mycoplasma|Rep: Sodium:solute symporter (SSS) family -
Mycoplasma capricolum subsp. capricolum (strain
California kid / ATCC27343 / NCTC 10154)
Length = 570
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/63 (26%), Positives = 34/63 (53%)
Query: 48 QEVDELVAKAISFNEVTKSIMGIPVLSNVTMDLYRGEYSVLFAERIQHKMMLTLEDLLTG 107
Q+V + SF +V K + +L+ +T+ L+ G ++L+A +Q + +ED++
Sbjct: 273 QDVVQRYQSNQSFKQVKKGLWTNAILALITILLFYGMGTLLYAFYVQKTGLTNIEDIMKS 332
Query: 108 IVI 110
I I
Sbjct: 333 IGI 335
>UniRef50_Q1YUY5 Cluster: Zinc ABC transporter, ATP-binding
protein ZnuC; n=1; gamma proteobacterium HTCC2207|Rep:
Zinc ABC transporter, ATP-binding protein ZnuC - gamma
proteobacterium HTCC2207
Length = 254
Score = 30.3 bits (65), Expect = 8.6
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 58 ISFNEVTKSIMGIPVLSNVTMDLYRGEYSVL 88
I +++KS PVL N++M L RGE + L
Sbjct: 6 IRLEQISKSFGSRPVLENISMQLMRGEITTL 36
>UniRef50_Q1GM89 Cluster: ABC transporter-related protein; n=2;
Alphaproteobacteria|Rep: ABC transporter-related protein
- Silicibacter sp. (strain TM1040)
Length = 500
Score = 30.3 bits (65), Expect = 8.6
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 54 VAKAISFNEVTKSIMGIPVLSNVTMDLYRGEYSVLFAERIQHKMMLTLEDLLTG 107
++K I +TK G+ L +V DL GE VLF E K TL +L G
Sbjct: 1 MSKLIETRGLTKKYPGVVALDHVDFDLEPGEVHVLFGENGAGKS--TLISMLAG 52
>UniRef50_Q186L3 Cluster: Probable cation-transporting ATPase; n=3;
Clostridium difficile|Rep: Probable cation-transporting
ATPase - Clostridium difficile (strain 630)
Length = 785
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 31 DKLCKIEAPSIKEREKLQEVDELVAKAISFNEVTKSIMGIPVLSNVTMDLYRGEYSVLFA 90
D LC + +I E K+Q D ++ + + NE+ +I N T++ R +Y+VL
Sbjct: 301 DTLCLDKTGTITEG-KMQVDDIVMLEEVDINEIMGNICNSLKDDNATLNAIRDKYNVLDT 359
Query: 91 ERIQHKMMLTLEDLLTGIVID 111
+ ++ + + E +G+ +
Sbjct: 360 YKAKNLIPFSSERKYSGVTFE 380
>UniRef50_A7BS86 Cluster: Cation transport ATPase; n=4;
Beggiatoa|Rep: Cation transport ATPase - Beggiatoa sp.
PS
Length = 689
Score = 30.3 bits (65), Expect = 8.6
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 66 SIMGIPVLSNVTMDLYRGEYSVLFAERIQHKMMLTLEDLLTGIVIDPY 113
S++ +PV V + ++R Y LF ER ML +++GIV Y
Sbjct: 104 SLLSVPVSLYVGLPIFRAAYQSLFKERKLKVAMLDSIAIISGIVTGYY 151
>UniRef50_A6VW58 Cluster: Sensor protein; n=2; Marinomonas|Rep:
Sensor protein - Marinomonas sp. MWYL1
Length = 578
Score = 30.3 bits (65), Expect = 8.6
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 12 AIGGQMSWNSILFKSVEGKDKLCKIEAPSIKEREKLQEVDELVA-KAISFNEVTKSIM-G 69
AIG WN++L K VE + K + + + +K+ + LV+ A N T +M
Sbjct: 277 AIGAIGIWNAMLRKEVEKRSSQLKAQQEQLIQADKMASLGVLVSGVAHEINNPTGLLMLN 336
Query: 70 IPVLSNVTMDL--YRGEYS 86
+P+L + D Y +Y+
Sbjct: 337 LPILKSAWEDALPYLAQYA 355
>UniRef50_Q23VE6 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 302
Score = 30.3 bits (65), Expect = 8.6
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 26 SVEGKDKLCKIEAPSIKEREKLQEVDELVAKAISFNEVTKSIMGIPVLSNVTMDLYRGEY 85
S E K K K + IK+ ++QEV+E KA + V + + +S + Y+ E
Sbjct: 145 SEENKLKKQKQKLDQIKK--EIQEVEEQTEKARNQKAVNEENI-TDNISRIQQSKYQLEI 201
Query: 86 SVLFAERIQHKMMLTLEDLLT 106
+ ERI +K +TL++L T
Sbjct: 202 TNTEIERISNKQKVTLDELTT 222
>UniRef50_Q6FN93 Cluster: Similar to sp|Q12451 Saccharomyces
cerevisiae YDL019c; n=1; Candida glabrata|Rep: Similar
to sp|Q12451 Saccharomyces cerevisiae YDL019c - Candida
glabrata (Yeast) (Torulopsis glabrata)
Length = 1249
Score = 30.3 bits (65), Expect = 8.6
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 18 SWNSILFKSVEGKDKLCKIEAPSIKEREKLQEVDELVAKAISFNEVTKSIMGIPVLSNVT 77
S+NS +S+ GKDKL I+ P K+ + +++DE++ K I +E P + N
Sbjct: 501 SFNSPTLESLLGKDKLNAID-PYAKDSD--EDIDEILVKPIDPDEEYLKTQYGPFIEN-- 555
Query: 78 MDLYRGEYSVLFAERIQ 94
+++Y+ S+ A ++
Sbjct: 556 LNVYKKTISMQLASVLE 572
>UniRef50_Q5K9Y2 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 381
Score = 30.3 bits (65), Expect = 8.6
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 56 KAISFNEVTKSIMGIPVLSNVTMDLYRGEYSVLF--AERIQHKMMLTLEDLL 105
K ++ EV ++ IP L+++T LY+ YS F ++ + +LT+ L+
Sbjct: 229 KVLASPEVNGALPNIPSLASLTNSLYKSNYSAFFIALAEVEQQYLLTIPYLV 280
>UniRef50_Q398W2 Cluster: Ribose import ATP-binding protein rbsA 2;
n=45; Proteobacteria|Rep: Ribose import ATP-binding
protein rbsA 2 - Burkholderia sp. (strain 383)
(Burkholderia cepacia (strain ATCC 17760/ NCIB 9086 /
R18194))
Length = 506
Score = 30.3 bits (65), Expect = 8.6
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 58 ISFNEVTKSIMGIPVLSNVTMDLYRGEYSVLFAERIQHKMMLTLEDLLTGI 108
+ + +TKS G+ L+++ +++ RGE L E K TL +L GI
Sbjct: 5 LRLSHITKSFPGVKALADIDLEIARGEIHALLGENGAGKS--TLMKILCGI 53
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.321 0.137 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,500,391
Number of Sequences: 1657284
Number of extensions: 3934231
Number of successful extensions: 11852
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 11837
Number of HSP's gapped (non-prelim): 39
length of query: 116
length of database: 575,637,011
effective HSP length: 90
effective length of query: 26
effective length of database: 426,481,451
effective search space: 11088517726
effective search space used: 11088517726
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 65 (30.3 bits)
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