GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002727-TA|BGIBMGA002727-PA|undefined
         (116 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   1.8  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   1.8  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        20   7.1  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 43  EREKLQEVDELVAKAISFNEVTKSIMGIPVLSNV 76
           +RE  + VD+ + KA+     T S M  PV+  V
Sbjct: 301 DRESAKNVDQRIQKALFLFACTNSCMN-PVVYGV 333


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 43  EREKLQEVDELVAKAISFNEVTKSIMGIPVLSNV 76
           +RE  + VD+ + KA+     T S M  PV+  V
Sbjct: 301 DRESAKNVDQRIQKALFLFACTNSCMN-PVVYGV 333


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 13  IGGQMSWN 20
           IGG M+WN
Sbjct: 435 IGGMMNWN 442


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.137    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,800
Number of Sequences: 317
Number of extensions: 758
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 116
length of database: 114,650
effective HSP length: 50
effective length of query: 66
effective length of database: 98,800
effective search space:  6520800
effective search space used:  6520800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.5 bits)
S2: 38 (19.4 bits)