GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002725-TA|BGIBMGA002725-PA|undefined
         (251 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC042051-1|AAH42051.1|  705|Homo sapiens ESPNL protein protein.        32   2.2  
AL359512-8|CAI94964.1| 1191|Homo sapiens membrane associated DNA...    30   8.9  
AL359512-6|CAI94962.1|  187|Homo sapiens membrane associated DNA...    30   8.9  
AK027042-1|BAB15634.1|  540|Homo sapiens protein ( Homo sapiens ...    30   8.9  
AF255304-1|AAG00433.1|  419|Homo sapiens membrane-associated nuc...    30   8.9  

>BC042051-1|AAH42051.1|  705|Homo sapiens ESPNL protein protein.
          Length = 705

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 13/36 (36%), Positives = 17/36 (47%)

Query: 70  MTAGVSRSEWEYTPLYDVTRPFLEEIPATLETPPPP 105
           M   + R  W  TPL+D       E+P  +  PPPP
Sbjct: 5   MGTPILRDSWGGTPLHDAAENGQMEVPLLMTPPPPP 40


>AL359512-8|CAI94964.1| 1191|Homo sapiens membrane associated DNA
            binding protein protein.
          Length = 1191

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 14/37 (37%), Positives = 21/37 (56%)

Query: 14   DSEPGADLDLEIDVTDTDPGDILTVPLVNSLSISLVI 50
            D++P  D++LE+   DTD  D  + P+   L I L I
Sbjct: 1050 DTKPDRDIELELSALDTDEPDGQSEPIEEILDIQLGI 1086


>AL359512-6|CAI94962.1|  187|Homo sapiens membrane associated DNA
           binding protein protein.
          Length = 187

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 14/37 (37%), Positives = 21/37 (56%)

Query: 14  DSEPGADLDLEIDVTDTDPGDILTVPLVNSLSISLVI 50
           D++P  D++LE+   DTD  D  + P+   L I L I
Sbjct: 108 DTKPDRDIELELSALDTDEPDGQSEPIEEILDIQLGI 144


>AK027042-1|BAB15634.1|  540|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23389 fis, clone HEP17027. ).
          Length = 540

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 14/37 (37%), Positives = 21/37 (56%)

Query: 14  DSEPGADLDLEIDVTDTDPGDILTVPLVNSLSISLVI 50
           D++P  D++LE+   DTD  D  + P+   L I L I
Sbjct: 399 DTKPDRDIELELSALDTDEPDGQSEPIEEILDIQLGI 435


>AF255304-1|AAG00433.1|  419|Homo sapiens membrane-associated
           nucleic acid binding protein protein.
          Length = 419

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 14/37 (37%), Positives = 21/37 (56%)

Query: 14  DSEPGADLDLEIDVTDTDPGDILTVPLVNSLSISLVI 50
           D++P  D++LE+   DTD  D  + P+   L I L I
Sbjct: 278 DTKPDRDIELELSALDTDEPDGQSEPIEEILDIQLGI 314


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.315    0.134    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,162,325
Number of Sequences: 224733
Number of extensions: 1842057
Number of successful extensions: 3327
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3322
Number of HSP's gapped (non-prelim): 5
length of query: 251
length of database: 73,234,838
effective HSP length: 88
effective length of query: 163
effective length of database: 53,458,334
effective search space: 8713708442
effective search space used: 8713708442
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 64 (29.9 bits)