GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002725-TA|BGIBMGA002725-PA|undefined
         (251 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X15586-1|CAA33611.1| 1443|Drosophila melanogaster protein ( D.me...    31   1.1  
AY052060-1|AAK93484.1|  495|Drosophila melanogaster LP09632p pro...    31   2.0  
AJ295236-1|CAC16735.1|  495|Drosophila melanogaster painting of ...    31   2.0  
AE013599-3935|AAM68326.1|  495|Drosophila melanogaster CG3691-PB...    31   2.0  
AE013599-3934|AAF47254.1|  495|Drosophila melanogaster CG3691-PA...    31   2.0  
AE014296-3144|AAF49165.1|  759|Drosophila melanogaster CG14087-P...    30   2.7  
DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut pr...    29   4.6  
DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker p...    29   4.6  
AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB...    29   4.6  
AE014134-1970|AAF53017.1|  874|Drosophila melanogaster CG6700-PA...    29   6.1  
BT029042-1|ABJ16975.1|  128|Drosophila melanogaster IP04527p pro...    29   8.1  
AE014297-1863|AAF55070.1|  142|Drosophila melanogaster CG8087-PA...    29   8.1  

>X15586-1|CAA33611.1| 1443|Drosophila melanogaster protein (
            D.melanogaster 75B mRNAencoding hypothetical 75B protein.
            ).
          Length = 1443

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 4/84 (4%)

Query: 96   PATLETPPPPVLVWIAWASWRSIFTWAECKTES-SP--SGESIVAISTSDTNGDSFATRT 152
            P++  TPPP V     W S   I T  + + +S SP  +G S  + S+S ++  S +T +
Sbjct: 1215 PSSSSTPPPSVQNQQRWGSSSVITTTCQQRQQSVSPHSNGSSSSSSSSSSSSSSSSSTSS 1274

Query: 153  N-DGSRKRIAQSISVASSGKTGTG 175
            N   S     Q      S   GTG
Sbjct: 1275 NCSSSSASSCQYFQSPHSTSIGTG 1298


>AY052060-1|AAK93484.1|  495|Drosophila melanogaster LP09632p
           protein.
          Length = 495

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 123 ECKTESSPSGESIVAISTSDTNGDSFATRTNDGSRKR 159
           +CK  S P  ESI+ IS SD   DS      DG RK+
Sbjct: 318 DCKVISPPPLESII-ISDSDNCSDSSGNGKEDGKRKK 353


>AJ295236-1|CAC16735.1|  495|Drosophila melanogaster painting of
           fourth protein protein.
          Length = 495

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 123 ECKTESSPSGESIVAISTSDTNGDSFATRTNDGSRKR 159
           +CK  S P  ESI+ IS SD   DS      DG RK+
Sbjct: 318 DCKVISPPPLESII-ISDSDNCSDSSGNGKEDGKRKK 353


>AE013599-3935|AAM68326.1|  495|Drosophila melanogaster CG3691-PB,
           isoform B protein.
          Length = 495

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 123 ECKTESSPSGESIVAISTSDTNGDSFATRTNDGSRKR 159
           +CK  S P  ESI+ IS SD   DS      DG RK+
Sbjct: 318 DCKVISPPPLESII-ISDSDNCSDSSGNGKEDGKRKK 353


>AE013599-3934|AAF47254.1|  495|Drosophila melanogaster CG3691-PA,
           isoform A protein.
          Length = 495

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 123 ECKTESSPSGESIVAISTSDTNGDSFATRTNDGSRKR 159
           +CK  S P  ESI+ IS SD   DS      DG RK+
Sbjct: 318 DCKVISPPPLESII-ISDSDNCSDSSGNGKEDGKRKK 353


>AE014296-3144|AAF49165.1|  759|Drosophila melanogaster CG14087-PA
           protein.
          Length = 759

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 9/79 (11%)

Query: 81  YTPLYDVTRPFLEEIPATLETPPPPVLVWIAWASWR------SIFTWAECKTESSPSGES 134
           + P+  ++R F+++I   ++TP P   +W ++ + +      S   W  C   +S   ++
Sbjct: 146 FRPMSPISRSFVDDID--IDTPSPED-IWGSYLNVKMGIIKLSDAVWPLCCMTNSEVSKT 202

Query: 135 IVAISTSDTNGDSFATRTN 153
              IST   N + F T+TN
Sbjct: 203 PPPISTDSQNSNKFPTKTN 221


>DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut
           protein.
          Length = 2176

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 5/72 (6%)

Query: 82  TPLYDVTRPFLEEIPATLETPPPPVLVWIAWASWRSIFTWAECKTESSP---SGESIVAI 138
           TPL + T P +  +P     P PP+ V    AS   +  W E  T ++P      + V I
Sbjct: 691 TPLPETTTPRVVPVPRPTFAPEPPLDVVETTASTHHL--WTEVPTTAAPFFTEYPAEVLI 748

Query: 139 STSDTNGDSFAT 150
           +T  T+   F T
Sbjct: 749 TTHRTSAGRFTT 760


>DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker
           protein.
          Length = 2165

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 5/72 (6%)

Query: 82  TPLYDVTRPFLEEIPATLETPPPPVLVWIAWASWRSIFTWAECKTESSP---SGESIVAI 138
           TPL + T P +  +P     P PP+ V    AS   +  W E  T ++P      + V I
Sbjct: 680 TPLPETTTPRVVPVPRPTFAPEPPLDVVETTASTHHL--WTEVPTTAAPFFTEYPAEVLI 737

Query: 139 STSDTNGDSFAT 150
           +T  T+   F T
Sbjct: 738 TTHRTSAGRFTT 749


>AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB
           protein.
          Length = 1984

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 5/72 (6%)

Query: 82  TPLYDVTRPFLEEIPATLETPPPPVLVWIAWASWRSIFTWAECKTESSP---SGESIVAI 138
           TPL + T P +  +P     P PP+ V    AS   +  W E  T ++P      + V I
Sbjct: 484 TPLPETTTPRVVPVPRPTFAPEPPLDVVETTASTHHL--WTEVPTTAAPFFTEYPAEVLI 541

Query: 139 STSDTNGDSFAT 150
           +T  T+   F T
Sbjct: 542 TTHRTSAGRFTT 553


>AE014134-1970|AAF53017.1|  874|Drosophila melanogaster CG6700-PA
           protein.
          Length = 874

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 9/20 (45%), Positives = 14/20 (70%)

Query: 88  TRPFLEEIPATLETPPPPVL 107
           + PF  + PAT + PPPP++
Sbjct: 211 SNPFANQTPATPQAPPPPII 230


>BT029042-1|ABJ16975.1|  128|Drosophila melanogaster IP04527p
           protein.
          Length = 128

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 3/23 (13%)

Query: 107 LVWIAW---ASWRSIFTWAECKT 126
           L+W++W   ASW S+  W  C+T
Sbjct: 41  LIWLSWCPAASWPSLAHWFSCRT 63


>AE014297-1863|AAF55070.1|  142|Drosophila melanogaster CG8087-PA
           protein.
          Length = 142

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)

Query: 123 ECKTESSPSGESIVAISTSDTNGDSFATRTNDGSRKRIAQSISVASSGKTGTGR 176
           +C T  +P+    VA + +DT   + AT T   +      + + ASS  T +GR
Sbjct: 37  DCTT--NPTDSECVAEAAADTTSTTVATPTTTATTTSATATTTAASSTNTSSGR 88


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.315    0.134    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,310,478
Number of Sequences: 52641
Number of extensions: 568113
Number of successful extensions: 1506
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1505
Number of HSP's gapped (non-prelim): 12
length of query: 251
length of database: 24,830,863
effective HSP length: 83
effective length of query: 168
effective length of database: 20,461,660
effective search space: 3437558880
effective search space used: 3437558880
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)