Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002723-TA|BGIBMGA002723-PA|IPR004156|Organic anion
transporter polypeptide OATP, IPR011497|Protease inhibitor, Kazal-type
         (411 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    26   0.51 
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    25   0.89 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.6  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   6.3  

>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 26.2 bits (55), Expect = 0.51
 Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 281 LLIIRCTDKHDKAMAMGVIQFAIGVFGNVPCPIVFGAAVDAACRL-RDYACGELGACVFY 339
           LL + C D     +A+ ++  A+GVF  +   I +   + A  R+  D  C     C  +
Sbjct: 63  LLSLVCADTRLNKLAVFIVAGAVGVFSVLTILISYIYILMAILRMSADGGCRNFSTCSSH 122

Query: 340 DTHSF 344
            T +F
Sbjct: 123 PTAAF 127


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 25.4 bits (53), Expect = 0.89
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 282 LIIRCTDKHDKAMAMGVIQFAIGVFGNVPCPIVFGAAVDAACRL-RDYACGELGACVFYD 340
           L + C D     +A+ ++  A+GVF +    I +   + A  R+  D  C     C  + 
Sbjct: 65  LSLLCADTRLNKLAVFIVAGAVGVFSSPTILISYIYILMAILRMSADGGCRNFSTCSSHP 124

Query: 341 THSF 344
           T +F
Sbjct: 125 TAAF 128


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)

Query: 365 LVWSKAGRIDMNPS 378
           + W K G+I++NPS
Sbjct: 839 VTWLKGGKIELNPS 852


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)

Query: 365 LVWSKAGRIDMNPS 378
           + W K G+I++NPS
Sbjct: 835 VTWLKGGKIELNPS 848


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.6 bits (46), Expect = 6.3
 Identities = 12/25 (48%), Positives = 15/25 (60%)

Query: 145 LMFVSCPEKSYRYLSAASDSALPCS 169
           LM  + P  S RYLSAA+ S+   S
Sbjct: 817 LMVGNSPASSPRYLSAAATSSTSTS 841


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.328    0.139    0.433 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,566
Number of Sequences: 429
Number of extensions: 3999
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 5
length of query: 411
length of database: 140,377
effective HSP length: 59
effective length of query: 352
effective length of database: 115,066
effective search space: 40503232
effective search space used: 40503232
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 45 (22.2 bits)