GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002722-TA|BGIBMGA002722-PA|IPR004156|Organic anion
transporter polypeptide OATP
         (317 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.9  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   3.9  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   6.8  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   6.8  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   9.0  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   9.0  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    21   9.0  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   9.0  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 5/39 (12%)

Query: 98  GVEATPEEQERLATGNNNGSL-----VAKLPPRSQQAHP 131
           G E +PEE ++L    + GS+      +  PP  + A P
Sbjct: 17  GEEGSPEEGDKLEGDEDTGSMTPNSAASPAPPEEEAASP 55


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 12/41 (29%), Positives = 20/41 (48%)

Query: 161 SVTTTLEKLYKVESKTTGTLLAATEIGQICTALFLTYLAGR 201
           SV    +  Y  ++    +L    ++ Q+  ALF+ YL GR
Sbjct: 209 SVQDLSDIFYYKDTAQLVSLALLMQLTQLVPALFVIYLCGR 249


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 2/54 (3%)

Query: 6   IKTPCGEKSRGGRSGCTALPQPAVSNCKLQSVSDASGARTQPPHPLAYPGSDII 59
           +KT  G   +G    C+   + + S+      S AS  +T P  P A  G D++
Sbjct: 394 VKTHNGNGKKGSSDSCSDSEENSQSDITNNVNSPASMNQTPP--PTAQMGLDMV 445


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund
          protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 12/37 (32%), Positives = 15/37 (40%)

Query: 26 QPAVSNCKLQSVSDASGARTQPPHPLAYPGSDIIRLP 62
          QP V+ CKL S  D            ++PG    R P
Sbjct: 10 QPGVNRCKLLSCKDFDTLYRDCTTASSWPGRPPKRAP 46


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 36  SVSDASGARTQPPHPLAYPGSDIIRLPQLMVT 67
           +V D   + +QP  P   P  DI R P + +T
Sbjct: 108 AVVDPLNSCSQPAAPGGQPIPDIPRYPWMSIT 139


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 36  SVSDASGARTQPPHPLAYPGSDIIRLPQLMVT 67
           +V D   + +QP  P   P  DI R P + +T
Sbjct: 167 AVVDPLNSCSQPAAPGGQPIPDIPRYPWMSIT 198


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 36  SVSDASGARTQPPHPLAYPGSDIIRLPQLMVT 67
           +V D   + +QP  P   P  DI R P + +T
Sbjct: 108 AVVDPLNSCSQPAAPGGQPIPDIPRYPWMSIT 139


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 36  SVSDASGARTQPPHPLAYPGSDIIRLPQLMVT 67
           +V D   + +QP  P   P  DI R P + +T
Sbjct: 167 AVVDPLNSCSQPAAPGGQPIPDIPRYPWMSIT 198


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.136    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,046
Number of Sequences: 317
Number of extensions: 2561
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 9
length of query: 317
length of database: 114,650
effective HSP length: 57
effective length of query: 260
effective length of database: 96,581
effective search space: 25111060
effective search space used: 25111060
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 43 (21.4 bits)