BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002721-TA|BGIBMGA002721-PA|IPR002624|Deoxynucleoside
kinase
(248 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y18048-1|CAB41881.1| 250|Drosophila melanogaster deoxynucleosid... 265 3e-71
AY102689-1|AAM27518.1| 250|Drosophila melanogaster LD27103p pro... 265 3e-71
AF185268-1|AAD56545.1| 250|Drosophila melanogaster deoxyribonuc... 265 3e-71
AF045610-1|AAD47355.2| 250|Drosophila melanogaster deoxyribonuc... 265 3e-71
AE014297-2606|AAF55615.1| 250|Drosophila melanogaster CG5452-PA... 265 3e-71
AF489106-1|AAM03127.1| 1192|Drosophila melanogaster unknown prot... 31 2.0
AE014134-2811|AAF53590.3| 1876|Drosophila melanogaster CG4841-PA... 30 3.4
AY229969-1|AAP04480.1| 1102|Drosophila melanogaster bitesize iso... 29 6.0
AE014297-1903|AAX52953.1| 1102|Drosophila melanogaster CG33555-P... 29 6.0
AE014297-1902|AAX52952.1| 1357|Drosophila melanogaster CG33555-P... 29 6.0
>Y18048-1|CAB41881.1| 250|Drosophila melanogaster deoxynucleoside
kinase protein.
Length = 250
Score = 265 bits (650), Expect = 3e-71
Identities = 124/231 (53%), Positives = 159/231 (68%), Gaps = 2/231 (0%)
Query: 3 ANNVKPFTVFVEGNIGSGKTTFLEHFRQFE-DITLLTEPVEMWRDLKGCNLLELMYKDPE 61
A +PFTV +EGNIGSGKTT+L HF +++ DI LLTEPVE WR++ G NLLELMYKDP+
Sbjct: 15 AEGTQPFTVLIEGNIGSGKTTYLNHFEKYKNDICLLTEPVEKWRNVNGVNLLELMYKDPK 74
Query: 62 KWAMTFQSYVSLTMLDMHRRPAPTPVKLMERSLFSARYCFVEHMMRNNTLHPAQFAVLDE 121
KWAM FQSYV+LTML H P +K+MERS+FSARYCFVE+M RN +L + L+E
Sbjct: 75 KWAMPFQSYVTLTMLQSHTAPTNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEE 134
Query: 122 WFRFIQHNIPIDADLIVYLKTSPSIVYQRIKKRARSEEQCVPLSYIEELHRLHEDWLINR 181
W++FI+ +I + ADLI+YL+TSP + Y+RI++RARSEE CVPL Y++ELH LHEDWLI++
Sbjct: 135 WYKFIEESIHVQADLIIYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHEDWLIHQ 194
Query: 182 IHAECXXXXXXXXXXXXXSQITDEYKRSEHQILRKAVNVVMSSPNKHSPKK 232
+ I EY+RSE I + SP SP K
Sbjct: 195 RRPQ-SCKVLVLDADLNLENIGTEYQRSESSIFDAISSNQQPSPVLVSPSK 244
>AY102689-1|AAM27518.1| 250|Drosophila melanogaster LD27103p
protein.
Length = 250
Score = 265 bits (650), Expect = 3e-71
Identities = 124/231 (53%), Positives = 159/231 (68%), Gaps = 2/231 (0%)
Query: 3 ANNVKPFTVFVEGNIGSGKTTFLEHFRQFE-DITLLTEPVEMWRDLKGCNLLELMYKDPE 61
A +PFTV +EGNIGSGKTT+L HF +++ DI LLTEPVE WR++ G NLLELMYKDP+
Sbjct: 15 AEGTQPFTVLIEGNIGSGKTTYLNHFEKYKNDICLLTEPVEKWRNVNGVNLLELMYKDPK 74
Query: 62 KWAMTFQSYVSLTMLDMHRRPAPTPVKLMERSLFSARYCFVEHMMRNNTLHPAQFAVLDE 121
KWAM FQSYV+LTML H P +K+MERS+FSARYCFVE+M RN +L + L+E
Sbjct: 75 KWAMPFQSYVTLTMLQSHTAPTNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEE 134
Query: 122 WFRFIQHNIPIDADLIVYLKTSPSIVYQRIKKRARSEEQCVPLSYIEELHRLHEDWLINR 181
W++FI+ +I + ADLI+YL+TSP + Y+RI++RARSEE CVPL Y++ELH LHEDWLI++
Sbjct: 135 WYKFIEESIHVQADLIIYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHEDWLIHQ 194
Query: 182 IHAECXXXXXXXXXXXXXSQITDEYKRSEHQILRKAVNVVMSSPNKHSPKK 232
+ I EY+RSE I + SP SP K
Sbjct: 195 RRPQ-SCKVLVLDADLNLENIGTEYQRSESSIFDAISSNQQPSPVLVSPSK 244
>AF185268-1|AAD56545.1| 250|Drosophila melanogaster
deoxyribonucleoside kinase protein.
Length = 250
Score = 265 bits (650), Expect = 3e-71
Identities = 124/231 (53%), Positives = 159/231 (68%), Gaps = 2/231 (0%)
Query: 3 ANNVKPFTVFVEGNIGSGKTTFLEHFRQFE-DITLLTEPVEMWRDLKGCNLLELMYKDPE 61
A +PFTV +EGNIGSGKTT+L HF +++ DI LLTEPVE WR++ G NLLELMYKDP+
Sbjct: 15 AEGTQPFTVLIEGNIGSGKTTYLNHFEKYKNDICLLTEPVEKWRNVNGVNLLELMYKDPK 74
Query: 62 KWAMTFQSYVSLTMLDMHRRPAPTPVKLMERSLFSARYCFVEHMMRNNTLHPAQFAVLDE 121
KWAM FQSYV+LTML H P +K+MERS+FSARYCFVE+M RN +L + L+E
Sbjct: 75 KWAMPFQSYVTLTMLQSHTAPTNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEE 134
Query: 122 WFRFIQHNIPIDADLIVYLKTSPSIVYQRIKKRARSEEQCVPLSYIEELHRLHEDWLINR 181
W++FI+ +I + ADLI+YL+TSP + Y+RI++RARSEE CVPL Y++ELH LHEDWLI++
Sbjct: 135 WYKFIEESIHVQADLIIYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHEDWLIHQ 194
Query: 182 IHAECXXXXXXXXXXXXXSQITDEYKRSEHQILRKAVNVVMSSPNKHSPKK 232
+ I EY+RSE I + SP SP K
Sbjct: 195 RRPQ-SCKVLVLDADLNLENIGTEYQRSESSIFDAISSNQQPSPVLVSPSK 244
>AF045610-1|AAD47355.2| 250|Drosophila melanogaster
deoxyribonucleoside kinase protein.
Length = 250
Score = 265 bits (650), Expect = 3e-71
Identities = 124/231 (53%), Positives = 159/231 (68%), Gaps = 2/231 (0%)
Query: 3 ANNVKPFTVFVEGNIGSGKTTFLEHFRQFE-DITLLTEPVEMWRDLKGCNLLELMYKDPE 61
A +PFTV +EGNIGSGKTT+L HF +++ DI LLTEPVE WR++ G NLLELMYKDP+
Sbjct: 15 AEGTQPFTVLIEGNIGSGKTTYLNHFEKYKNDICLLTEPVEKWRNVNGVNLLELMYKDPK 74
Query: 62 KWAMTFQSYVSLTMLDMHRRPAPTPVKLMERSLFSARYCFVEHMMRNNTLHPAQFAVLDE 121
KWAM FQSYV+LTML H P +K+MERS+FSARYCFVE+M RN +L + L+E
Sbjct: 75 KWAMPFQSYVTLTMLQSHTAPTNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEE 134
Query: 122 WFRFIQHNIPIDADLIVYLKTSPSIVYQRIKKRARSEEQCVPLSYIEELHRLHEDWLINR 181
W++FI+ +I + ADLI+YL+TSP + Y+RI++RARSEE CVPL Y++ELH LHEDWLI++
Sbjct: 135 WYKFIEESIHVQADLIIYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHEDWLIHQ 194
Query: 182 IHAECXXXXXXXXXXXXXSQITDEYKRSEHQILRKAVNVVMSSPNKHSPKK 232
+ I EY+RSE I + SP SP K
Sbjct: 195 RRPQ-SCKVLVLDADLNLENIGTEYQRSESSIFDAISSNQQPSPVLVSPSK 244
>AE014297-2606|AAF55615.1| 250|Drosophila melanogaster CG5452-PA
protein.
Length = 250
Score = 265 bits (650), Expect = 3e-71
Identities = 124/231 (53%), Positives = 159/231 (68%), Gaps = 2/231 (0%)
Query: 3 ANNVKPFTVFVEGNIGSGKTTFLEHFRQFE-DITLLTEPVEMWRDLKGCNLLELMYKDPE 61
A +PFTV +EGNIGSGKTT+L HF +++ DI LLTEPVE WR++ G NLLELMYKDP+
Sbjct: 15 AEGTQPFTVLIEGNIGSGKTTYLNHFEKYKNDICLLTEPVEKWRNVNGVNLLELMYKDPK 74
Query: 62 KWAMTFQSYVSLTMLDMHRRPAPTPVKLMERSLFSARYCFVEHMMRNNTLHPAQFAVLDE 121
KWAM FQSYV+LTML H P +K+MERS+FSARYCFVE+M RN +L + L+E
Sbjct: 75 KWAMPFQSYVTLTMLQSHTAPTNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEE 134
Query: 122 WFRFIQHNIPIDADLIVYLKTSPSIVYQRIKKRARSEEQCVPLSYIEELHRLHEDWLINR 181
W++FI+ +I + ADLI+YL+TSP + Y+RI++RARSEE CVPL Y++ELH LHEDWLI++
Sbjct: 135 WYKFIEESIHVQADLIIYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHEDWLIHQ 194
Query: 182 IHAECXXXXXXXXXXXXXSQITDEYKRSEHQILRKAVNVVMSSPNKHSPKK 232
+ I EY+RSE I + SP SP K
Sbjct: 195 RRPQ-SCKVLVLDADLNLENIGTEYQRSESSIFDAISSNQQPSPVLVSPSK 244
>AF489106-1|AAM03127.1| 1192|Drosophila melanogaster unknown protein.
Length = 1192
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 109 NTLHPAQFAVLDEWFRFIQHNIPIDADLI 137
N + P QF L+EWF + N ID LI
Sbjct: 1128 NIIFPPQFKTLNEWFHYAFANSEIDGKLI 1156
>AE014134-2811|AAF53590.3| 1876|Drosophila melanogaster CG4841-PA
protein.
Length = 1876
Score = 29.9 bits (64), Expect = 3.4
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 109 NTLHPAQFAVLDEWFRFIQHNIPIDA-DLIVYLKTSPSIVYQRIKKRARS 157
N + P QF L+EWF + N IDA D L+ I I++ S
Sbjct: 1514 NIIFPPQFKTLNEWFHYAFANSEIDAVDRFPMLECEREIASNSIERTRAS 1563
>AY229969-1|AAP04480.1| 1102|Drosophila melanogaster bitesize
isoform 1 protein.
Length = 1102
Score = 29.1 bits (62), Expect = 6.0
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 127 QHNIPIDADLIVYLKTSPSIVYQRIKKRARSEEQCVP 163
Q +P +Y+ TSP+ +Y R +R+ E+Q P
Sbjct: 48 QSTLPAQPTPAIYMSTSPNRLYSRSPERSPGEQQRYP 84
>AE014297-1903|AAX52953.1| 1102|Drosophila melanogaster CG33555-PB,
isoform B protein.
Length = 1102
Score = 29.1 bits (62), Expect = 6.0
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 127 QHNIPIDADLIVYLKTSPSIVYQRIKKRARSEEQCVP 163
Q +P +Y+ TSP+ +Y R +R+ E+Q P
Sbjct: 48 QSTLPAQPTPAIYMSTSPNRLYSRSPERSPGEQQRYP 84
>AE014297-1902|AAX52952.1| 1357|Drosophila melanogaster CG33555-PA,
isoform A protein.
Length = 1357
Score = 29.1 bits (62), Expect = 6.0
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 127 QHNIPIDADLIVYLKTSPSIVYQRIKKRARSEEQCVP 163
Q +P +Y+ TSP+ +Y R +R+ E+Q P
Sbjct: 300 QSTLPAQPTPAIYMSTSPNRLYSRSPERSPGEQQRYP 336
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.323 0.135 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,297,015
Number of Sequences: 52641
Number of extensions: 489130
Number of successful extensions: 1173
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1158
Number of HSP's gapped (non-prelim): 10
length of query: 248
length of database: 24,830,863
effective HSP length: 83
effective length of query: 165
effective length of database: 20,461,660
effective search space: 3376173900
effective search space used: 3376173900
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 61 (28.7 bits)
- SilkBase 1999-2023 -