GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002720-TA|BGIBMGA002720-PA|undefined
         (111 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   0.72 
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   0.72 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   0.72 
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   3.8  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   3.8  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   3.8  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   3.8  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   3.8  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   3.8  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   3.8  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   3.8  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   3.8  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    20   5.1  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    20   6.7  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    20   6.7  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    19   8.9  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.0 bits (47), Expect = 0.72
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 73  FLVVALVVAGMGFYYFSMCYPYF 95
           F V  L + G+ FY+F   + YF
Sbjct: 227 FEVQVLTIFGVSFYFFISTFFYF 249


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.0 bits (47), Expect = 0.72
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 73  FLVVALVVAGMGFYYFSMCYPYF 95
           F V  L + G+ FY+F   + YF
Sbjct: 223 FEVQVLTIFGVSFYFFISTFFYF 245


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 0.72
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 25  RSSNRGNSKYGSGNQGLGKAKPYGGTSPGIPSQSTTR 61
           RSS+  ++K G G  G G  +P GG S  + +  T +
Sbjct: 517 RSSD--DAKGGGGGSGSGNNQPPGGPSSHVSAVLTCK 551


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 9/27 (33%), Positives = 12/27 (44%)

Query: 33  KYGSGNQGLGKAKPYGGTSPGIPSQST 59
           KY       G A P   ++ G P +ST
Sbjct: 100 KYADSTSSTGVASPQDLSTNGAPPRST 126


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 9/27 (33%), Positives = 12/27 (44%)

Query: 33  KYGSGNQGLGKAKPYGGTSPGIPSQST 59
           KY       G A P   ++ G P +ST
Sbjct: 100 KYADSTSSTGVASPQDLSTNGAPPRST 126


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 9/27 (33%), Positives = 12/27 (44%)

Query: 33  KYGSGNQGLGKAKPYGGTSPGIPSQST 59
           KY       G A P   ++ G P +ST
Sbjct: 100 KYADSTSSTGVASPQDLSTNGAPPRST 126


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 9/27 (33%), Positives = 12/27 (44%)

Query: 33  KYGSGNQGLGKAKPYGGTSPGIPSQST 59
           KY       G A P   ++ G P +ST
Sbjct: 100 KYADSTSSTGVASPQDLSTNGAPPRST 126


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 9/27 (33%), Positives = 12/27 (44%)

Query: 33  KYGSGNQGLGKAKPYGGTSPGIPSQST 59
           KY       G A P   ++ G P +ST
Sbjct: 100 KYADSTSSTGVASPQDLSTNGAPPRST 126


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
          protein.
          Length = 268

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 9/27 (33%), Positives = 12/27 (44%)

Query: 33 KYGSGNQGLGKAKPYGGTSPGIPSQST 59
          KY       G A P   ++ G P +ST
Sbjct: 56 KYADSTSSTGVASPQDLSTNGAPPRST 82


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 9/27 (33%), Positives = 12/27 (44%)

Query: 33  KYGSGNQGLGKAKPYGGTSPGIPSQST 59
           KY       G A P   ++ G P +ST
Sbjct: 100 KYADSTSSTGVASPQDLSTNGAPPRST 126


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 9/27 (33%), Positives = 12/27 (44%)

Query: 33  KYGSGNQGLGKAKPYGGTSPGIPSQST 59
           KY       G A P   ++ G P +ST
Sbjct: 100 KYADSTSSTGVASPQDLSTNGAPPRST 126


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 9/27 (33%), Positives = 12/27 (44%)

Query: 33  KYGSGNQGLGKAKPYGGTSPGIPSQST 59
           KY       G A P   ++ G P +ST
Sbjct: 100 KYADSTSSTGVASPQDLSTNGAPPRST 126


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.2 bits (40), Expect = 5.1
 Identities = 8/18 (44%), Positives = 10/18 (55%)

Query: 48  GGTSPGIPSQSTTRRGVG 65
           GG  P +PS  + RR  G
Sbjct: 270 GGLPPQVPSPRSQRRYTG 287


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)

Query: 88  FSMCYPYFCHRQEKYHI 104
           F + Y ++C++  K HI
Sbjct: 14  FLLFYLFYCYKTIKQHI 30


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)

Query: 88  FSMCYPYFCHRQEKYHI 104
           F + Y ++C++  K HI
Sbjct: 14  FLLFYLFYCYKTIKQHI 30


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 19.4 bits (38), Expect = 8.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 27  SNRGNSKYGSGNQGLGKAKPYGG 49
           S+  N+K G+  +G G +  Y G
Sbjct: 270 SSASNAKLGAPVKGAGNSGKYTG 292


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.136    0.437 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,659
Number of Sequences: 317
Number of extensions: 1150
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of query: 111
length of database: 114,650
effective HSP length: 49
effective length of query: 62
effective length of database: 99,117
effective search space:  6145254
effective search space used:  6145254
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.5 bits)
S2: 38 (19.4 bits)