Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002720-TA|BGIBMGA002720-PA|undefined
(111 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 31 0.18
U64847-6|AAB04875.1| 380|Caenorhabditis elegans Hypothetical pr... 29 0.56
U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell l... 28 1.3
AL132948-16|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical... 28 1.3
AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger p... 28 1.3
Z35596-2|CAI79145.1| 113|Caenorhabditis elegans Hypothetical pr... 28 1.7
Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical pr... 27 2.2
AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical ... 27 2.2
Z82084-2|CAB04976.1| 536|Caenorhabditis elegans Hypothetical pr... 27 3.9
L14324-3|AAA28185.1| 851|Caenorhabditis elegans Abnormal nucleo... 27 3.9
AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical ... 27 3.9
AF047027-1|AAC14263.1| 851|Caenorhabditis elegans B box zinc fi... 27 3.9
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 26 5.2
U37430-2|AAL08045.2| 802|Caenorhabditis elegans Hypothetical pr... 26 5.2
U28738-8|AAA68313.1| 126|Caenorhabditis elegans Small nuclear r... 26 5.2
Z81586-12|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical p... 26 6.9
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 26 6.9
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 26 6.9
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 26 6.9
Z81094-3|CAB03153.1| 995|Caenorhabditis elegans Hypothetical pr... 25 9.1
Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical pr... 25 9.1
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 25 9.1
Z11126-7|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 25 9.1
U58752-2|AAB00665.1| 571|Caenorhabditis elegans Hypothetical pr... 25 9.1
AL132902-13|CAL64008.1| 913|Caenorhabditis elegans Hypothetical... 25 9.1
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 25 9.1
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 25 9.1
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 25 9.1
AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein. 25 9.1
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 31.1 bits (67), Expect = 0.18
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 30 GNSKYGSGNQGLGKAKPYGGTSPGIPS 56
G +G G G G P+GG +P PS
Sbjct: 492 GGGGFGGGGGGFGSGSPFGGAAPSPPS 518
>U64847-6|AAB04875.1| 380|Caenorhabditis elegans Hypothetical
protein F08F3.8 protein.
Length = 380
Score = 29.5 bits (63), Expect = 0.56
Identities = 16/58 (27%), Positives = 25/58 (43%)
Query: 29 RGNSKYGSGNQGLGKAKPYGGTSPGIPSQSTTRRGVGISAWGIVFLVVALVVAGMGFY 86
+ + K + G G G+ PG S T V IS +V L++ +V G+ Y
Sbjct: 226 KNHVKKAQASVGAGGTGGGSGSGPGSSSSDQTTMIVSISVGAVVLLIILGIVIGIYLY 283
>U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell
lineage protein 13 protein.
Length = 2248
Score = 28.3 bits (60), Expect = 1.3
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 22 DALRSSNRGNSKYGSGNQGLGKAKP 46
+AL S GN+K+GS N G+A+P
Sbjct: 1819 NALSMSQFGNAKHGSANHSHGQAQP 1843
>AL132948-16|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
protein Y39B6A.18 protein.
Length = 1352
Score = 28.3 bits (60), Expect = 1.3
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 26 SSNRGNSKYGSGNQGLGKAKPYGGTSPGIPSQSTTRRGVGISAWGIVFLVVALVVAGMGF 85
S + G GSG G G A G ++ S ++ + +V ++VALV+ G+ F
Sbjct: 794 SGDTGTGPTGSGT-GTGAAAAVGSSTVSTVSDESSDFPILFVVIPVVLILVALVIGGIVF 852
Query: 86 YYF 88
++
Sbjct: 853 IWY 855
>AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger
protein LIN-13 protein.
Length = 2248
Score = 28.3 bits (60), Expect = 1.3
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 22 DALRSSNRGNSKYGSGNQGLGKAKP 46
+AL S GN+K+GS N G+A+P
Sbjct: 1819 NALSMSQFGNAKHGSANHSHGQAQP 1843
>Z35596-2|CAI79145.1| 113|Caenorhabditis elegans Hypothetical
protein C30D11.3 protein.
Length = 113
Score = 27.9 bits (59), Expect = 1.7
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 25 RSSNRG--NSKYGSGNQGLGKAKPYGGTSPGIPSQSTTRRGVGISAWGI 71
RS+NRG + G G+ GL A GG S+ T+R +SA GI
Sbjct: 40 RSTNRGGVSGTGGGGSGGLQGAPGAGGPRASHSSRRTSRLHNNVSALGI 88
>Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical
protein M01F1.5 protein.
Length = 604
Score = 27.5 bits (58), Expect = 2.2
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 35 GSGNQGLGKAKPYGGTSPGIPSQSTTRRGVGISAWGIVFLVVALVVAGMGFYYFSMCYPY 94
G G+ LG+ K G S T + +AW + L++ ++ G+ + SM P
Sbjct: 89 GPGSDFLGRKKIIIGASVTF----TIGAIICAAAWTKIILLIGRILLGLAIGFASMIVPI 144
Query: 95 FCHRQEKYHIMG 106
+ HI G
Sbjct: 145 YVSEASPSHIRG 156
>AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical
protein Y51A2D.5 protein.
Length = 613
Score = 27.5 bits (58), Expect = 2.2
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 68 AWGIVFLVVALVVAGMGFYYFSMCYPYFCHRQEKYHIMGT 107
AW + +++ + G+G + SM P + H+ GT
Sbjct: 116 AWTKIVMLIGRIFLGVGIGFASMVVPVYLGEASPTHVRGT 155
>Z82084-2|CAB04976.1| 536|Caenorhabditis elegans Hypothetical
protein ZK1053.2 protein.
Length = 536
Score = 26.6 bits (56), Expect = 3.9
Identities = 15/66 (22%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 42 GKAKPYGGTSPGIPSQSTTRRGVGISAWGIVFLVVALVVAGMGFYYFSMC--YPYFCHRQ 99
GK K GT+ +PS + G+ + + + + L+V + + ++C + Y C +Q
Sbjct: 362 GKRKVDNGTTVYVPSDPDAQEGIDAN----ILIYILLLVLLIWCFCIALCLIWMYVCAKQ 417
Query: 100 EKYHIM 105
K+ ++
Sbjct: 418 RKHKMI 423
>L14324-3|AAA28185.1| 851|Caenorhabditis elegans Abnormal nucleoli
protein 1 protein.
Length = 851
Score = 26.6 bits (56), Expect = 3.9
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Query: 16 NHTAGC---DALRSSN--RGNSKYGSGNQGLGKAKPYGGTSPG 53
+H AG +A SN R N +G +Q LG P G + PG
Sbjct: 477 HHIAGSLPMNAYSDSNLLRPNKDFGGSSQSLGPFNPLGASVPG 519
>AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical
protein Y41C4A.5 protein.
Length = 373
Score = 26.6 bits (56), Expect = 3.9
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 19 AGCDALRSSNRGNSKYGSGNQGLGKAKPYGG 49
+G + +++ GNS YGS N G G G
Sbjct: 206 SGNSSNNNNSSGNSNYGSNNSGSGNGNSNSG 236
Score = 25.4 bits (53), Expect = 9.1
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 27 SNRGNSKYGSGNQGLGKAKPYGGTSPG 53
S GNS G+GN G G G + G
Sbjct: 228 SGNGNSNSGNGNSGNGNGNNAGNSGNG 254
>AF047027-1|AAC14263.1| 851|Caenorhabditis elegans B box zinc
finger protein Ncl-1 protein.
Length = 851
Score = 26.6 bits (56), Expect = 3.9
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Query: 16 NHTAGC---DALRSSN--RGNSKYGSGNQGLGKAKPYGGTSPG 53
+H AG +A SN R N +G +Q LG P G + PG
Sbjct: 477 HHIAGSLPMNAYSDSNLLRPNKDFGGSSQSLGPFNPLGASVPG 519
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 26.2 bits (55), Expect = 5.2
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 4/47 (8%)
Query: 19 AGCDALRSSNRGNSKYGSGNQGLGKAKPYGGTSPGIPSQSTTRRGVG 65
AG N S +G G+ G PYGG S G ST G G
Sbjct: 69 AGGSGFGGGNTCGSGFGGGSTG---GSPYGGASSGF-GGSTATSGFG 111
>U37430-2|AAL08045.2| 802|Caenorhabditis elegans Hypothetical
protein K09F5.6 protein.
Length = 802
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 26 SSNRGNSKYGSGNQGLGKAKPYGGTSPGIPSQ 57
S N+G+ YG+ G G +GG P Q
Sbjct: 751 SENKGSGIYGTSGIGSGNNVQWGGAQRAAPGQ 782
>U28738-8|AAA68313.1| 126|Caenorhabditis elegans Small nuclear
ribonucleoproteinprotein 3 protein.
Length = 126
Score = 26.2 bits (55), Expect = 5.2
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 19 AGCDALRSSNRGNSKYGSGNQGLGKAKPYGG 49
A A R RG + G G +G G+ P GG
Sbjct: 92 ARAGASRGRGRGGMRGGRGGRGRGRGGPRGG 122
>Z81586-12|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical
protein T05F1.6 protein.
Length = 1165
Score = 25.8 bits (54), Expect = 6.9
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 22 DALRSSNRGNSKYGSGNQGLGKAKPYGGTSPGIPSQSTTRRG 63
D +N N + S ++ +AK T PS +T RRG
Sbjct: 279 DGESEANEENQESQSSSRSTRRAKRVSATVSSTPSSNTPRRG 320
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore
complex protein protein11 protein.
Length = 805
Score = 25.8 bits (54), Expect = 6.9
Identities = 17/50 (34%), Positives = 23/50 (46%)
Query: 35 GSGNQGLGKAKPYGGTSPGIPSQSTTRRGVGISAWGIVFLVVALVVAGMG 84
G G AK G T+ G+ +TT G+ I A G L + AG+G
Sbjct: 549 GLGLTSTPLAKGTGWTTSGLKGAATTSAGLKIGASGSDTLSEEEIKAGLG 598
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 25.8 bits (54), Expect = 6.9
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Query: 16 NHTAGCDALRSSNRGNSKYGSGN---QGLGKAKPYGGTSPGIPSQSTTRRGVG 65
N AG S N G + +GSGN G G GGT G + T G G
Sbjct: 70 NGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNA-GGTGFGSGNAGGTGFGSG 121
Score = 25.8 bits (54), Expect = 6.9
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Query: 19 AGCDALRSSNRGNSKYGSGN---QGLGKAKPYGGTSPGIPSQSTTRRGVG 65
AG S N G + +GSGN GLG GGT G + T G G
Sbjct: 113 AGGTGFGSGNAGGTGFGSGNAGGTGLGSGNA-GGTGFGSGNAGGTGFGSG 161
Score = 25.4 bits (53), Expect = 9.1
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Query: 19 AGCDALRSSNRGNSKYGSGN---QGLGKAKPYGGTSPGIPSQSTTRRGVG 65
AG L S N G + +GSGN G G GGT G T G G
Sbjct: 133 AGGTGLGSGNAGGTGFGSGNAGGTGFGSGNA-GGTGFGSGKAGGTGFGSG 181
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 25.8 bits (54), Expect = 6.9
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Query: 16 NHTAGCDALRSSNRGNSKYGSGN---QGLGKAKPYGGTSPGIPSQSTTRRGVG 65
N AG S N G + +GSGN G G GGT G + T G G
Sbjct: 70 NGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNA-GGTGFGSGNAGGTGFGSG 121
Score = 25.8 bits (54), Expect = 6.9
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Query: 19 AGCDALRSSNRGNSKYGSGN---QGLGKAKPYGGTSPGIPSQSTTRRGVG 65
AG S N G + +GSGN GLG GGT G + T G G
Sbjct: 113 AGGTGFGSGNAGGTGFGSGNAGGTGLGSGNA-GGTGFGSGNAGGTGFGSG 161
Score = 25.4 bits (53), Expect = 9.1
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Query: 19 AGCDALRSSNRGNSKYGSGN---QGLGKAKPYGGTSPGIPSQSTTRRGVG 65
AG L S N G + +GSGN G G GGT G T G G
Sbjct: 133 AGGTGLGSGNAGGTGFGSGNAGGTGFGSGNA-GGTGFGSGKAGGTGFGSG 181
>Z81094-3|CAB03153.1| 995|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 995
Score = 25.4 bits (53), Expect = 9.1
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
Query: 22 DALRSSNRGNSKYGSGNQGLGKAKPYGGTSPGIPSQSTTRRG 63
DA+ S+RG S G G G+ YGG G R G
Sbjct: 790 DAMAKSSRGKS----GTSGFGQRGGYGGRGGGFGGTGRGRGG 827
>Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical
protein C47D12.7 protein.
Length = 618
Score = 25.4 bits (53), Expect = 9.1
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 37 GNQGLGKAK---PYGGTSPGIPSQSTTRRGVGISAW 69
G GL A+ P+ G +PS ST R VG++A+
Sbjct: 434 GTTGLASAEYFDPHTGNWFPLPSMSTRRSSVGVAAF 469
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 25.4 bits (53), Expect = 9.1
Identities = 14/51 (27%), Positives = 22/51 (43%)
Query: 20 GCDALRSSNRGNSKYGSGNQGLGKAKPYGGTSPGIPSQSTTRRGVGISAWG 70
G + +S G G G G++ GG+S S++ G G S+ G
Sbjct: 332 GGSSYSGGGEASSSSGGGYSGGGESSSSGGSSYSSGGDSSSSSGGGYSSGG 382
>Z11126-7|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 25.4 bits (53), Expect = 9.1
Identities = 14/51 (27%), Positives = 22/51 (43%)
Query: 20 GCDALRSSNRGNSKYGSGNQGLGKAKPYGGTSPGIPSQSTTRRGVGISAWG 70
G + +S G G G G++ GG+S S++ G G S+ G
Sbjct: 332 GGSSYSGGGEASSSSGGGYSGGGESSSSGGSSYSSGGDSSSSSGGGYSSGG 382
>U58752-2|AAB00665.1| 571|Caenorhabditis elegans Hypothetical
protein B0218.2 protein.
Length = 571
Score = 25.4 bits (53), Expect = 9.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 23 ALRSSNRGNSKYGSGNQGLGKAKPYGGTSPG 53
+L S N N YG+ N + K + GG+S G
Sbjct: 188 SLLSYNCSNPVYGTTNHPMDKTRTSGGSSGG 218
>AL132902-13|CAL64008.1| 913|Caenorhabditis elegans Hypothetical
protein Y71A12B.17 protein.
Length = 913
Score = 25.4 bits (53), Expect = 9.1
Identities = 10/33 (30%), Positives = 21/33 (63%)
Query: 70 GIVFLVVALVVAGMGFYYFSMCYPYFCHRQEKY 102
G V++++ALV+ +GF F + Y ++ ++ Y
Sbjct: 54 GEVYVIIALVIIFLGFIGFLIGYNFYNWTKKMY 86
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 25.4 bits (53), Expect = 9.1
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 35 GSGNQGLGKAKPYGGTSPGIPSQSTTRRG 63
G+ + G+G KP S G P++ T+ G
Sbjct: 348 GTSSSGIGGQKPGATESSGFPTKETSTSG 376
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 25.4 bits (53), Expect = 9.1
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 35 GSGNQGLGKAKPYGGTSPGIPSQSTTRRG 63
G+ + G+G KP S G P++ T+ G
Sbjct: 348 GTSSSGIGGQKPGATESSGFPTKETSTSG 376
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 25.4 bits (53), Expect = 9.1
Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Query: 16 NHTAGCDALRSSNRGNSKYGSGN---QGLGKAKPYGGTSPGIPSQSTTRRGVG 65
N AG S N G + +GSGN G G GGT G + T G G
Sbjct: 70 NGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNA-GGTGFGSGNAGGTGFGGG 121
Score = 25.4 bits (53), Expect = 9.1
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Query: 19 AGCDALRSSNRGNSKYGSGN---QGLGKAKPYGGTSPGIPSQSTTRRGVG 65
AG L S N G + +GSGN G G GGT G T G G
Sbjct: 133 AGGTGLGSGNAGGTGFGSGNAGGTGFGSGNA-GGTGFGSGKAGGTGFGSG 181
>AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein.
Length = 618
Score = 25.4 bits (53), Expect = 9.1
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 37 GNQGLGKAK---PYGGTSPGIPSQSTTRRGVGISAW 69
G GL A+ P+ G +PS ST R VG++A+
Sbjct: 434 GTTGLASAEYFDPHTGNWFPLPSMSTRRSSVGVAAF 469
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.321 0.136 0.437
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,710,927
Number of Sequences: 27539
Number of extensions: 104190
Number of successful extensions: 428
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 367
Number of HSP's gapped (non-prelim): 55
length of query: 111
length of database: 12,573,161
effective HSP length: 72
effective length of query: 39
effective length of database: 10,590,353
effective search space: 413023767
effective search space used: 413023767
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 53 (25.4 bits)
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