GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002718-TA|BGIBMGA002718-PA|IPR000705|Galactokinase,
IPR006203|GHMP kinase, ATP-binding region, IPR006204|GHMP kinase,
IPR013750|GHMP kinase, C-terminal
         (489 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    24   2.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   8.4  

>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 11/50 (22%), Positives = 23/50 (46%)

Query: 169 QNAKISKLKIASLCAKSERYIGTQGGGMDQAIAFLAEKSSAQYITWNPLN 218
           Q+   S++K+ + C+  +  +        Q    + + S+AQ + W P N
Sbjct: 117 QDISFSRVKLTNTCSPPQGQLVLSSMHKYQPRILIVKASTAQALGWAPTN 166


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 67  SILIAV-GLINEKDLRIRNTNSKYCKFQMDISKPEDFDIKPDED 109
           S++IAV GL+    + I    ++ CKF   ++K  +FD+K   D
Sbjct: 721 SVMIAVSGLVYIATVWICTLMNR-CKFSEFMTKLLEFDVKLQSD 763


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.136    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,699
Number of Sequences: 317
Number of extensions: 4382
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 2
length of query: 489
length of database: 114,650
effective HSP length: 59
effective length of query: 430
effective length of database: 95,947
effective search space: 41257210
effective search space used: 41257210
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)