Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002718-TA|BGIBMGA002718-PA|IPR000705|Galactokinase,
IPR006203|GHMP kinase, ATP-binding region, IPR006204|GHMP kinase,
IPR013750|GHMP kinase, C-terminal
(489 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003739-5|AAK84629.2| 422|Caenorhabditis elegans Temporarily a... 209 3e-54
Z81078-8|CAJ43906.1| 1071|Caenorhabditis elegans Hypothetical pr... 32 1.1
Z81078-7|CAD92377.1| 1035|Caenorhabditis elegans Hypothetical pr... 32 1.1
Z81078-6|CAB03079.2| 1074|Caenorhabditis elegans Hypothetical pr... 32 1.1
AL021466-5|CAJ43908.1| 1071|Caenorhabditis elegans Hypothetical ... 32 1.1
AL021466-3|CAD92394.1| 1035|Caenorhabditis elegans Hypothetical ... 32 1.1
AL021466-2|CAA16284.2| 1074|Caenorhabditis elegans Hypothetical ... 32 1.1
AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical ... 32 1.1
Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical p... 31 1.4
AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical ... 31 1.4
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p... 30 3.2
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr... 30 3.2
Z50794-3|CAA90657.2| 681|Caenorhabditis elegans Hypothetical pr... 30 3.2
AL021488-1|CAB63369.1| 502|Caenorhabditis elegans Hypothetical ... 30 3.2
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein. 30 3.2
U39849-6|AAM81124.1| 642|Caenorhabditis elegans Hypothetical pr... 30 4.2
Z82266-1|CAB05178.2| 626|Caenorhabditis elegans Hypothetical pr... 29 5.6
AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain (... 29 5.6
AL032646-2|CAA21677.1| 260|Caenorhabditis elegans Hypothetical ... 29 9.8
AF326937-1|AAG49387.1| 260|Caenorhabditis elegans 2P40 protein. 29 9.8
>AF003739-5|AAK84629.2| 422|Caenorhabditis elegans Temporarily
assigned gene nameprotein 96 protein.
Length = 422
Score = 209 bits (511), Expect = 3e-54
Identities = 152/439 (34%), Positives = 205/439 (46%), Gaps = 45/439 (10%)
Query: 22 QLNEKFEEEFGIKPNFTVKVPGRVNIIGEHIDYCGYPVLPMALEQSILIAVGLINEKDLR 81
QL E+F + +GI+P V PGRVN+IGEHIDY Y V PMA++ + I + +
Sbjct: 6 QLAEQFVKLYGIEPEVRVTCPGRVNLIGEHIDYHDYGVFPMAIDAATTILAAKNDTNSIV 65
Query: 82 IRNTNSKYCKFQMDISKPEDFDIKPDEDGKPFWYNYVLCGVKGGLEFLNRKIRGGVIFLI 141
N +SKY + I P P W++Y+LCG +G + + + + G+ FL+
Sbjct: 66 FSNFDSKYESWSSPIPCPWKGCTSPK------WFDYLLCGWRGIMNREDGQEQFGMSFLL 119
Query: 142 DGNIPPXXXXXXXXXXXXXXXXXXXH--AQN---AKISKLKIASLCAKSERYIGTQGGGM 196
G IPP N IS+ A LC +SE IGT GGM
Sbjct: 120 YGTIPPSSGLSSSSSLVCASALATLSLIVDNDPFEHISRKDFAHLCIESEPLIGTLSGGM 179
Query: 197 DQAIAFLAEKSSAQYITWNPLNATPVSLPENATFVVAHSLAEANKAATNDFNTRVIECRL 256
DQA LA + +A I +NPL + + LP +A FVV HS E NK AT+ +N RVIE R+
Sbjct: 180 DQAAEVLASEGTALRIDFNPLRSKNIQLPSDAVFVVVHSNTELNKGATSHYNERVIEGRI 239
Query: 257 AAKILAARSGIEVTKEIIXXXXXXXXXXXXXNEMLELVTEHLAKDLYLKSDICELLNIPE 316
A+I + +T E+L++V E D K + +L I
Sbjct: 240 VAQIF--KQKFNITSGSFRLKEIQTLSGKSFKEILKIVEE--LPDEVNKEQVIDL--IGA 293
Query: 317 DELNRFYLTPNTRHLTEFKLKQRAIHVYEEAKRVDSFRYLCQHSTFKNELSTNSNNGDLL 376
D+L LT NTR +FKL+ RA HV+ EA RV+ F C KN
Sbjct: 294 DKLEE-CLTENTRSFQKFKLRPRARHVFSEAYRVEQFESACAQ---KN------------ 337
Query: 377 YENGVEKISNLIENLGVLMLESHESLKTHYECSHDNLDRLVDLSRKMNVY-ARLTGAGWG 435
I+ +G LM ESH S YECS LD + L ARLTGAGWG
Sbjct: 338 -----------IQEMGRLMNESHRSCAIDYECSCRELDEICRLYLDHGALGARLTGAGWG 386
Query: 436 GCIVALCPKENVTKYIETL 454
GC V L ++V + + L
Sbjct: 387 GCAVVLMAADDVDRVVAEL 405
>Z81078-8|CAJ43906.1| 1071|Caenorhabditis elegans Hypothetical
protein F36H2.1c protein.
Length = 1071
Score = 31.9 bits (69), Expect = 1.1
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 298 LAKDLYLKSDICELLNIPEDELNR--FYLTPNTRHLTEFKLKQRAIHVYEEAKRVDSFRY 355
+ +D ++ + IPE EL R F L+ T LT+ ++ + IH+ A D+F
Sbjct: 410 IGRDKHIPETVIRSSTIPE-ELGRISFLLSDKTGTLTKNEMHFKKIHLGTVAFSSDAFEE 468
Query: 356 LCQH--STFKNELSTNSNNGDLLYENGVEKIS 385
+ QH S + L+ +S + L +N VE I+
Sbjct: 469 VGQHVRSAYAGRLAKHSFSAKL--QNAVEAIA 498
>Z81078-7|CAD92377.1| 1035|Caenorhabditis elegans Hypothetical
protein F36H2.1b protein.
Length = 1035
Score = 31.9 bits (69), Expect = 1.1
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 298 LAKDLYLKSDICELLNIPEDELNR--FYLTPNTRHLTEFKLKQRAIHVYEEAKRVDSFRY 355
+ +D ++ + IPE EL R F L+ T LT+ ++ + IH+ A D+F
Sbjct: 374 IGRDKHIPETVIRSSTIPE-ELGRISFLLSDKTGTLTKNEMHFKKIHLGTVAFSSDAFEE 432
Query: 356 LCQH--STFKNELSTNSNNGDLLYENGVEKIS 385
+ QH S + L+ +S + L +N VE I+
Sbjct: 433 VGQHVRSAYAGRLAKHSFSAKL--QNAVEAIA 462
>Z81078-6|CAB03079.2| 1074|Caenorhabditis elegans Hypothetical
protein F36H2.1a protein.
Length = 1074
Score = 31.9 bits (69), Expect = 1.1
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 298 LAKDLYLKSDICELLNIPEDELNR--FYLTPNTRHLTEFKLKQRAIHVYEEAKRVDSFRY 355
+ +D ++ + IPE EL R F L+ T LT+ ++ + IH+ A D+F
Sbjct: 413 IGRDKHIPETVIRSSTIPE-ELGRISFLLSDKTGTLTKNEMHFKKIHLGTVAFSSDAFEE 471
Query: 356 LCQH--STFKNELSTNSNNGDLLYENGVEKIS 385
+ QH S + L+ +S + L +N VE I+
Sbjct: 472 VGQHVRSAYAGRLAKHSFSAKL--QNAVEAIA 501
>AL021466-5|CAJ43908.1| 1071|Caenorhabditis elegans Hypothetical
protein F36H2.1c protein.
Length = 1071
Score = 31.9 bits (69), Expect = 1.1
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 298 LAKDLYLKSDICELLNIPEDELNR--FYLTPNTRHLTEFKLKQRAIHVYEEAKRVDSFRY 355
+ +D ++ + IPE EL R F L+ T LT+ ++ + IH+ A D+F
Sbjct: 410 IGRDKHIPETVIRSSTIPE-ELGRISFLLSDKTGTLTKNEMHFKKIHLGTVAFSSDAFEE 468
Query: 356 LCQH--STFKNELSTNSNNGDLLYENGVEKIS 385
+ QH S + L+ +S + L +N VE I+
Sbjct: 469 VGQHVRSAYAGRLAKHSFSAKL--QNAVEAIA 498
>AL021466-3|CAD92394.1| 1035|Caenorhabditis elegans Hypothetical
protein F36H2.1b protein.
Length = 1035
Score = 31.9 bits (69), Expect = 1.1
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 298 LAKDLYLKSDICELLNIPEDELNR--FYLTPNTRHLTEFKLKQRAIHVYEEAKRVDSFRY 355
+ +D ++ + IPE EL R F L+ T LT+ ++ + IH+ A D+F
Sbjct: 374 IGRDKHIPETVIRSSTIPE-ELGRISFLLSDKTGTLTKNEMHFKKIHLGTVAFSSDAFEE 432
Query: 356 LCQH--STFKNELSTNSNNGDLLYENGVEKIS 385
+ QH S + L+ +S + L +N VE I+
Sbjct: 433 VGQHVRSAYAGRLAKHSFSAKL--QNAVEAIA 462
>AL021466-2|CAA16284.2| 1074|Caenorhabditis elegans Hypothetical
protein F36H2.1a protein.
Length = 1074
Score = 31.9 bits (69), Expect = 1.1
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 298 LAKDLYLKSDICELLNIPEDELNR--FYLTPNTRHLTEFKLKQRAIHVYEEAKRVDSFRY 355
+ +D ++ + IPE EL R F L+ T LT+ ++ + IH+ A D+F
Sbjct: 413 IGRDKHIPETVIRSSTIPE-ELGRISFLLSDKTGTLTKNEMHFKKIHLGTVAFSSDAFEE 471
Query: 356 LCQH--STFKNELSTNSNNGDLLYENGVEKIS 385
+ QH S + L+ +S + L +N VE I+
Sbjct: 472 VGQHVRSAYAGRLAKHSFSAKL--QNAVEAIA 501
>AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical
protein T05C3.2 protein.
Length = 1733
Score = 31.9 bits (69), Expect = 1.1
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 297 HLAKDLYLKSDICELLNIPEDELNRFYLTPNTRHLTEFKLKQRAIHVYEEAKRVDSF 353
H A+D L + + + E+ LN+ L P RHL EF + IHV EEA+ +D+F
Sbjct: 1645 HSAQDGSLLTVVLNDPMVKEETLNKIALLPCRRHLAEF----QHIHVPEEAE-LDTF 1696
>Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8 protein.
Length = 949
Score = 31.5 bits (68), Expect = 1.4
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 382 EKISNLIENLGVLMLESHESLKTHYECSHDNLDRLVDLSRKMNVYARLTGAGWGGCIVAL 441
E++SNLI + S E+ K E + + + DL RKMN Y +L+ + G C
Sbjct: 864 EQLSNLISEKEASVELSIENDKLRSEIDRKSKE-IGDLQRKMNNYEKLSQSRTGSCSSIS 922
Query: 442 CPK-ENVTKY 450
P+ +V++Y
Sbjct: 923 MPRPRSVSRY 932
>AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8 protein.
Length = 949
Score = 31.5 bits (68), Expect = 1.4
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 382 EKISNLIENLGVLMLESHESLKTHYECSHDNLDRLVDLSRKMNVYARLTGAGWGGCIVAL 441
E++SNLI + S E+ K E + + + DL RKMN Y +L+ + G C
Sbjct: 864 EQLSNLISEKEASVELSIENDKLRSEIDRKSKE-IGDLQRKMNNYEKLSQSRTGSCSSIS 922
Query: 442 CPK-ENVTKY 450
P+ +V++Y
Sbjct: 923 MPRPRSVSRY 932
>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 376 LYENGVEKISNLIENLGVLMLESHE-SLKTHYECSHDNLDRLVDLSRKMNVYA 427
L NG E++ I+ L ++E HE + K+ EC + R V L R N Y+
Sbjct: 1170 LMANGGEELIERIDRLLTALIEYHEVASKSLVECVDSLMSRTVQLMRYYNQYS 1222
>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical protein
C02F4.1 protein.
Length = 1781
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 376 LYENGVEKISNLIENLGVLMLESHE-SLKTHYECSHDNLDRLVDLSRKMNVYA 427
L NG E++ I+ L ++E HE + K+ EC + R V L R N Y+
Sbjct: 1170 LMANGGEELIERIDRLLTALIEYHEVASKSLVECVDSLMSRTVQLMRYYNQYS 1222
>Z50794-3|CAA90657.2| 681|Caenorhabditis elegans Hypothetical
protein F59F5.3 protein.
Length = 681
Score = 30.3 bits (65), Expect = 3.2
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Query: 312 LNIPEDELNRFYLTPNTRHLTEFKLKQRAIHVYEEAKRVDSFRYLCQHSTFKNEL 366
++I + +NRFY + L FKL+ A + YE + F+ L TF++E+
Sbjct: 191 IDISRNPINRFYQCEHNDELISFKLQNMANNGYE-----NKFKMLMNSYTFQSEI 240
>AL021488-1|CAB63369.1| 502|Caenorhabditis elegans Hypothetical
protein Y45F10A.2 protein.
Length = 502
Score = 30.3 bits (65), Expect = 3.2
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 289 EMLELVTEHLAKDLY---LKSDICELLNIPEDELN-----RFYLTPNTRHLTEFKLKQRA 340
E E++TEHLA DLY L C ++ + +L+ R L HL + Q
Sbjct: 209 EEQEILTEHLATDLYNLCLDKSACRVIQLAIQKLDVHLATRLSLELRDTHLVRLSIDQNG 268
Query: 341 IHVYEE 346
HV ++
Sbjct: 269 NHVIQK 274
>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
Length = 1781
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 376 LYENGVEKISNLIENLGVLMLESHE-SLKTHYECSHDNLDRLVDLSRKMNVYA 427
L NG E++ I+ L ++E HE + K+ EC + R V L R N Y+
Sbjct: 1170 LMANGGEELIERIDRLLTALIEYHEVASKSLVECVDSLMSRTVQLMRYYNQYS 1222
>U39849-6|AAM81124.1| 642|Caenorhabditis elegans Hypothetical
protein C06A8.1b protein.
Length = 642
Score = 29.9 bits (64), Expect = 4.2
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 375 LLYENGVEKISNLIENLGVLMLESHESLKTHYECSHDNLDRLVD 418
+L +NGVE N + + + HYE H+ ++RL+D
Sbjct: 3 VLSKNGVETDENAVVEEKITLESGKSWSPKHYELLHERIERLID 46
>Z82266-1|CAB05178.2| 626|Caenorhabditis elegans Hypothetical
protein F23B2.3 protein.
Length = 626
Score = 29.5 bits (63), Expect = 5.6
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 8 EIPILKTTADTR-INQLNEKFEEEFGIKPNFTV 39
EIPIL D + +N+ NE+ E I PNFTV
Sbjct: 178 EIPILLGNTDQQSLNKGNEELREYQSIHPNFTV 210
>AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 28 protein.
Length = 494
Score = 29.5 bits (63), Expect = 5.6
Identities = 37/154 (24%), Positives = 72/154 (46%), Gaps = 15/154 (9%)
Query: 289 EMLELVTEHLAKDLYLKSDICELLNIPEDELNRFYLTPNTRHLTEFKLKQRAIHVYEEAK 348
E LEL++EH+ + LKS I + N + +T HL E + ++++Y
Sbjct: 133 EKLELISEHINQVEMLKS------WITNGDCNN--VIESTTHLLETQPWDASLYIYRAKC 184
Query: 349 RVDSFRYLCQHSTFKNELSTNSNNGDLLYE-NGVE-KISNLIENLGVLMLESHESLKTHY 406
V + K+ +S+N +LL+E + +E K++++ ++LG + E + H
Sbjct: 185 YVAEDKVKSAIHDMKHAAKLSSDNTELLFEMSELEYKVADVRDSLGSIR-ECLKLNPDHK 243
Query: 407 EC--SHDNLDRLVDLSRKMNVYARLTGAGWGGCI 438
+C S+ +L ++V M A + W C+
Sbjct: 244 KCYTSYKSLKKIVKSLDSMK--ASIEQQEWTKCL 275
>AL032646-2|CAA21677.1| 260|Caenorhabditis elegans Hypothetical
protein Y54E2A.3 protein.
Length = 260
Score = 28.7 bits (61), Expect = 9.8
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 429 LTGAGWGGCIVALCPKENVTKYIETLI--DNFYVEHCNLDRVSARSHVFATTPNRG 482
L GA G IV + +T+ IE L+ D F V C+ ++ ++ TTP G
Sbjct: 47 LCGATRGDIIVMKHTTKALTELIERLLHSDEFEVRRCSNGQIISQGRCNGTTPGNG 102
>AF326937-1|AAG49387.1| 260|Caenorhabditis elegans 2P40 protein.
Length = 260
Score = 28.7 bits (61), Expect = 9.8
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 429 LTGAGWGGCIVALCPKENVTKYIETLI--DNFYVEHCNLDRVSARSHVFATTPNRG 482
L GA G IV + +T+ IE L+ D F V C+ ++ ++ TTP G
Sbjct: 47 LCGATRGDIIVMKHTTKALTELIERLLHSDEFEVRRCSNGQIISQGRCNGTTPGNG 102
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.136 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,662,502
Number of Sequences: 27539
Number of extensions: 483085
Number of successful extensions: 1225
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1218
Number of HSP's gapped (non-prelim): 21
length of query: 489
length of database: 12,573,161
effective HSP length: 84
effective length of query: 405
effective length of database: 10,259,885
effective search space: 4155253425
effective search space used: 4155253425
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
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