Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002717-TA|BGIBMGA002717-PA|IPR007087|Zinc finger,
C2H2-type
(327 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 77 3e-15
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 67 3e-12
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 62 8e-11
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 61 2e-10
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 55 1e-08
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 53 5e-08
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 52 8e-08
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 52 8e-08
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 50 3e-07
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 46 1e-05
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 45 2e-05
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 40 5e-04
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 34 0.024
SPBC839.12 |rpc31||DNA-directed RNA polymerase III complex subun... 31 0.17
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 30 0.52
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 29 0.90
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 28 1.6
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 28 2.1
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B... 27 2.8
SPAC1006.05c |och1||alpha-1,6-mannosyltransferase Och1 |Schizosa... 27 2.8
SPBC1703.15c |vps33|SPBC2A9.01c|vacuolar sorting protein Vps33|S... 27 2.8
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 27 3.6
SPBC36.09 |sap61||U2 snRNP-associated protein sap61|Schizosaccha... 27 4.8
SPBC2D10.06 |rep1|rec16|MBF transcription factor complex subunit... 26 6.4
SPAC139.06 |hat1|SPAC23C4.01|histone acetyltransferase Hat1|Schi... 26 6.4
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 26 6.4
SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharo... 26 8.4
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 26 8.4
SPBC106.12c |||THO complex subunit |Schizosaccharomyces pombe|ch... 26 8.4
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 77.4 bits (182), Expect = 3e-15
Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 15/166 (9%)
Query: 173 LETHNEHRERR-FTC--EQCGRKFLTQTVLHTHVARRHSDRRYICHV--CDQPFIDKYNL 227
+E+ N ++ F C E+CG+K+ ++L H+ ++R ++C C + F K +L
Sbjct: 11 IESKNLRSAKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHL 70
Query: 228 AQHLIRHNSADRKYYKC--DVCDKLISSQSNLTLHMRIHSGERPYNCTY--CPKTFISRK 283
H H + K + C D CD +Q +L H+ +H +PY CT+ C + F +
Sbjct: 71 KIHKRCHTNV--KPFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQ 128
Query: 284 NLREHIRT-HTGERPYRCAV--CDQEFSQSSSMKRH-SKIHERQIT 325
LR HI HT PY C C+ F+ ++ H ++ HE+ I+
Sbjct: 129 QLRSHISACHTHLLPYPCTYQDCELRFATKQKLQNHVNRAHEKIIS 174
Score = 60.9 bits (141), Expect = 2e-10
Identities = 46/159 (28%), Positives = 71/159 (44%), Gaps = 18/159 (11%)
Query: 172 HLETHNEHRERRFTCEQ--CGRKFLTQTVLHTHVARRHSDRRYICHV--CDQPFIDKYNL 227
HL TH+ ER F C+ C + F ++ L H + + + CH CD F + +L
Sbjct: 43 HLRTHS--NERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHL 100
Query: 228 AQHLIRHNSADRKYYKC--DVCDKLISSQSNLTLHM-RIHSGERPYNCTY--CPKTFISR 282
+H+ H K Y C + CD+ S L H+ H+ PY CTY C F ++
Sbjct: 101 ERHIEVHRKP--KPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFATK 158
Query: 283 KNLREHI-RTHTGERPYRC----AVCDQEFSQSSSMKRH 316
+ L+ H+ R H Y C V + F + S ++ H
Sbjct: 159 QKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNH 197
Score = 51.2 bits (117), Expect = 2e-07
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 16/163 (9%)
Query: 172 HLETHNEHRERRFTCEQCGRKFLTQTVLHTHVARRHSD-RRYIC--HVCDQPFIDKYNLA 228
H+E H + + T E C F L +H++ H+ Y C C+ F K L
Sbjct: 103 HIEVHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQKLQ 162
Query: 229 QHLIRHNSADRKY---YKCDVCDKLISSQSNLTLHMRIHSGERPYNCTYCPKTFISRKNL 285
H+ R + Y ++ V + S L H+R P +C+ C + F + +L
Sbjct: 163 NHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNHIR--EAHVP-SCSICGRQFKTAAHL 219
Query: 286 REHIRTH----TGERPYRCAV--CDQEFSQSSSMKRH-SKIHE 321
R H+ H + Y C + C + F++SS++K+H S IHE
Sbjct: 220 RHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHE 262
Score = 48.4 bits (110), Expect = 1e-06
Identities = 36/143 (25%), Positives = 59/143 (41%), Gaps = 15/143 (10%)
Query: 185 TCEQCGRKFLTQTVLHTHVARRHSDR-RYIC--HVC-DQPFIDKYNLAQHLIRHNSADRK 240
T + C +F T+ L HV R H Y C C +K++ Q+ IR
Sbjct: 147 TYQDCELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNHIREAHVP-- 204
Query: 241 YYKCDVCDKLISSQSNLTLHMRIHSG----ERPYNCTY--CPKTFISRKNLREHIRT-HT 293
C +C + + ++L H+ +H + Y+C C K+F L++HI H
Sbjct: 205 --SCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHE 262
Query: 294 GERPYRCAVCDQEFSQSSSMKRH 316
G + C C +F ++RH
Sbjct: 263 GNMAFHCDSCGTKFGYKHMLQRH 285
Score = 45.6 bits (103), Expect = 1e-05
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 8/106 (7%)
Query: 199 LHTHVARRHSDRRYICHVCDQPFIDKYNLAQHLIRHNSA--DRKYYKCDV--CDKLISSQ 254
L H+ H C +C + F +L H++ H + +RK Y C + C K +
Sbjct: 194 LQNHIREAHVPS---CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRS 250
Query: 255 SNLTLHMR-IHSGERPYNCTYCPKTFISRKNLREHIRTHTGERPYR 299
S L H+ IH G ++C C F + L+ H+ T ++ ++
Sbjct: 251 SALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLERGTCKKAHK 296
Score = 36.3 bits (80), Expect = 0.006
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 7/90 (7%)
Query: 145 TCDICNKKFNYLDRFQAHKLEHEGKVTHLETHNEHRERRFTCEQCGRKFLTQTVLHTHVA 204
+C IC ++F + AH H V H T E + E C + F + L H++
Sbjct: 205 SCSICGRQF----KTAAHLRHH--VVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHIS 258
Query: 205 RRH-SDRRYICHVCDQPFIDKYNLAQHLIR 233
H + + C C F K+ L +HL R
Sbjct: 259 VIHEGNMAFHCDSCGTKFGYKHMLQRHLER 288
Score = 30.7 bits (66), Expect = 0.30
Identities = 26/115 (22%), Positives = 52/115 (45%), Gaps = 14/115 (12%)
Query: 184 FTCEQCGRKFLTQTVLHTHVARRHSDRRYICHVCDQPFID----KYNLAQHLIRHNSADR 239
F C+ CG KF + H+ +RH +R C +P+I+ K++ + + H+ ++
Sbjct: 267 FHCDSCGTKF-----GYKHMLQRHLERG-TCKKAHKPYINECGIKHDGIEGVAIHDQKEK 320
Query: 240 KYYKCDVCDKLISSQSNLTLHMRIHSGERPYNCTY--CPKTFISRKNLREHIRTH 292
+ V D + +T H + R Y+C++ C F ++ H+ +H
Sbjct: 321 ELSSNLVSDVAKKIINEVTGHG--YKEAREYSCSFPECNYRFKRLYDMHRHLNSH 373
Score = 25.8 bits (54), Expect = 8.4
Identities = 13/35 (37%), Positives = 13/35 (37%)
Query: 144 FTCDICNKKFNYLDRFQAHKLEHEGKVTHLETHNE 178
F CD C KF Y Q H K H NE
Sbjct: 267 FHCDSCGTKFGYKHMLQRHLERGTCKKAHKPYINE 301
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 67.3 bits (157), Expect = 3e-12
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 226 NLAQHLIRHNSADRKYYKCDV--CDKLISSQSNLTLHMRIHSGERPYNCTYCPKTFISRK 283
N + + S + Y C C+K + NL HM H+ RP+ C+ C K+F +
Sbjct: 554 NSSSSKAKSESKSQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQH 613
Query: 284 NLREHIRTHTGERPYRCAVCDQEFSQSSSMKRHSK 318
+ R H + HTG + + C C+Q F++ ++ RH K
Sbjct: 614 DKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYK 648
Score = 55.2 bits (127), Expect = 1e-08
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 270 YNCTY--CPKTFISRKNLREHIRTHTGERPYRCAVCDQEFSQSSSMKRHSKIH 320
Y CT+ C K F NL+ H+ THT RP++C++C + F++ +RH ++H
Sbjct: 570 YVCTFAGCNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLH 622
Score = 52.8 bits (121), Expect = 6e-08
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Query: 208 SDRRYICHV--CDQPFIDKYNLAQHLIRHNSADRKYYKCDVCDKLISSQSNLTLHMRIHS 265
S Y+C C++ F YNL H+ H + + ++C +C K + Q + H ++H+
Sbjct: 566 SQGNYVCTFAGCNKRFTRAYNLKSHMNTHTNY--RPFQCSICKKSFARQHDKRRHEQLHT 623
Query: 266 GERPYNCTYCPKTFISRKNLREHIRTHTGERPYRCA 301
G + + C C + F L H ++ G+ R A
Sbjct: 624 GIKAFACVTCNQRFARMDALNRHYKSEVGQNCLRTA 659
Score = 32.7 bits (71), Expect = 0.073
Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 189 CGRKFLTQTVLHTHVARRHSDRRYICHVCDQPFIDKYNLAQHLIRHNSADRKYYKCDVCD 248
C ++F L +H+ + R + C +C + F +++ +H H K + C C+
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGI--KAFACVTCN 634
Query: 249 KLISSQSNLTLHMRIHSGE 267
+ + L H + G+
Sbjct: 635 QRFARMDALNRHYKSEVGQ 653
Score = 32.3 bits (70), Expect = 0.097
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 12/90 (13%)
Query: 141 HFIFTCDICNKKFNYLDRFQAHKLEHEGKVTHLETHNEHRERRFTCEQCGRKFLTQTVLH 200
+++ T CNK+F +A+ L+ +H+ TH +R F C C + F Q
Sbjct: 569 NYVCTFAGCNKRFT-----RAYNLK-----SHMNTHTNYRP--FQCSICKKSFARQHDKR 616
Query: 201 THVARRHSDRRYICHVCDQPFIDKYNLAQH 230
H + + C C+Q F L +H
Sbjct: 617 RHEQLHTGIKAFACVTCNQRFARMDALNRH 646
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 62.5 bits (145), Expect = 8e-11
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 237 ADRKYYKC-DVCDKLISSQSNLTLHMRIHSGERPYNCTYCPKTFISRKNLREHIRTHTGE 295
AD KY + C+K I+ + N+ H++ H +RPY C C F+ +L+ H+R H
Sbjct: 439 ADGKYVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENG 498
Query: 296 RPYRCAVCDQEFSQSSSMKRHSK 318
RPY C C + F++ ++ RH +
Sbjct: 499 RPYVCE-CLKRFNRLDALNRHKQ 520
Score = 54.8 bits (126), Expect = 2e-08
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 270 YNCTY--CPKTFISRKNLREHIRTHTGERPYRCAVCDQEFSQSSSMKRHSKIHE 321
Y C Y C K + N+ HI+TH +RPYRC +C F + +KRH +IHE
Sbjct: 443 YVCLYNGCNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHE 496
Score = 35.9 bits (79), Expect = 0.008
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 189 CGRKFLTQTVLHTHVARRHSDRRYICHVCDQPFIDKYNLAQHLIRHNSADRKYYKCDVCD 248
C ++ + + +H+ SDR Y C +C F+ ++L +HL H + + Y C+ C
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENG--RPYVCE-CL 506
Query: 249 KLISSQSNLTLH 260
K + L H
Sbjct: 507 KRFNRLDALNRH 518
Score = 29.1 bits (62), Expect = 0.90
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Query: 171 THLETHNEHRERRFTCEQCGRKFLTQTVLHTHVARRHSDRRYICHVCDQPFIDKYNLAQH 230
+H++TH +R + C+ C F+ L H+ + R Y+C C + ++N
Sbjct: 462 SHIQTHLS--DRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-C----LKRFNRLDA 514
Query: 231 LIRH 234
L RH
Sbjct: 515 LNRH 518
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 60.9 bits (141), Expect = 2e-10
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 268 RPYNCTYCPKTFISRKNLREHIRTHTGERPYRCAV--CDQEFSQSSSMKRHSKIH 320
RPY C C K F ++ HIRTHTGE+P+ C C + FS+S + RH++IH
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIH 78
Score = 51.2 bits (117), Expect = 2e-07
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 242 YKCDVCDKLISSQSNLTLHMRIHSGERPYNCTY--CPKTFISRKNLREHIRTHTGERPYR 299
YKC +C K + T H+R H+GE+P+ CT+ C K F L H R HT R
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNANSRR 85
Query: 300 CA 301
A
Sbjct: 86 NA 87
Score = 30.7 bits (66), Expect = 0.30
Identities = 16/56 (28%), Positives = 22/56 (39%)
Query: 210 RRYICHVCDQPFIDKYNLAQHLIRHNSADRKYYKCDVCDKLISSQSNLTLHMRIHS 265
R Y C +C + F + +H+ H C K S LT H RIH+
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHT 79
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 11/66 (16%)
Query: 144 FTCDICNKKFNYLDRFQAHKLEHEGKVTHLETHNEHRERRFTCEQCGRKFLTQTVLHTHV 203
+ C +C K F ++LEH+ + H+ TH + T C ++F L H
Sbjct: 26 YKCPLCTKAF--------YRLEHQTR--HIRTHTGEKPHVCTFPGCAKRFSRSDELTRH- 74
Query: 204 ARRHSD 209
AR H++
Sbjct: 75 ARIHTN 80
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 55.2 bits (127), Expect = 1e-08
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 240 KYYKCDVCDKLISSQSNLTLHMRIHSGERPYNCTY--CPKTFISRKNLREHIRTH 292
K Y+C C ++ Q + H+R H+GE+P+ C+Y C K F R L H+RTH
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 51.2 bits (117), Expect = 2e-07
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 268 RPYNCTYCPKTFISRKNLREHIRTHTGERPYRCAV--CDQEFSQSSSMKRHSKIHERQ 323
+ Y C +C + F +++ HIR+HTGE+P+ C+ C + F++ + RH + H R+
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRK 59
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 53.2 bits (122), Expect = 5e-08
Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 23/120 (19%)
Query: 213 ICH--VCDQPFIDKYNLAQHLIRHNSADRKYYKCDVCDKLISSQSNLTLHMRIHSGERP- 269
ICH C+Q + NL H+ HN +LIS+ +++ H+ RP
Sbjct: 25 ICHWQSCEQDLLTLDNLVHHI--HNGTTSNL-------RLISNINSILDHI---GNRRPK 72
Query: 270 YNCTY--CPKTFI---SRKNLREHIRTHTGERPYRCAV--CDQEFSQSSSMKRHSK-IHE 321
Y C + CP+ + SR L H+R+HTGE+P+ C+V CD+ F++S ++ +H + +HE
Sbjct: 73 YTCEWDDCPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVHE 132
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 52.4 bits (120), Expect = 8e-08
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 253 SQSNLTLHMRIHS-GERPYNCTY--CPKTFISRKNLREHIRTHTGERPYRCAVCDQEFSQ 309
++ L R H G+ + CTY CPK+F +++LR H RTH + + C+ C++ F++
Sbjct: 8 TEKPLKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFAR 67
Query: 310 SSSMKRH 316
S + RH
Sbjct: 68 SDVLNRH 74
Score = 35.1 bits (77), Expect = 0.014
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 234 HNSADRKYYKCDV--CDKLISSQSNLTLHMRIHSGERPYNCTYCPKTFISRKNLREHIR 290
H D ++Y C C K + + +L H R H + ++C++C + F L H++
Sbjct: 19 HRLGDPRFY-CTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQ 76
Score = 31.1 bits (67), Expect = 0.22
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Query: 172 HLETHNEHRE--RRFTCEQCGRKFLTQTVLHTHVARRHSDRR 211
HL H E + F+C C R F VL+ HV + H ++
Sbjct: 42 HLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQKQ 83
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 281 SRKNLREHIRTHT-GERPYRCAV--CDQEFSQSSSMKRHSKIHE 321
+ K L++ R H G+ + C C + F++ ++RH + HE
Sbjct: 8 TEKPLKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHE 51
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 52.4 bits (120), Expect = 8e-08
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 15/107 (14%)
Query: 218 DQPFIDKYNLAQ--HLIRHNSADRKYYKCDVCDKLISSQSNLTLHMRIHSGERPYNCTYC 275
D + D +N + H+ R +S RK + SS +N+ Y CT C
Sbjct: 425 DSNYSDHHNNDKRAHVSRRHSTSRKIAQSHTGSSSTSSAANVR-----------YRCTEC 473
Query: 276 PKTFISRKNLREHIRTHTGERPYRC--AVCDQEFSQSSSMKRHSKIH 320
+ F +L+ H +HTGERP+ C A C + F+ S+M+RH +IH
Sbjct: 474 LQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 38.3 bits (85), Expect = 0.001
Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 4/107 (3%)
Query: 160 QAHKLEHEGKVTHLETHNEHRERRFTCEQCGRKFLTQTVLHTHVARRHSDRRYICHVCDQ 219
QAH + + + + HN + + + + Q+ + ++ RY C C Q
Sbjct: 416 QAHPMGQQSDSNYSDHHNNDKRAHVSRRHSTSRKIAQSHTGSSSTSSAANVRYRCTECLQ 475
Query: 220 PFIDKYNLAQHLIRHNSADRKYYKCDV--CDKLISSQSNLTLHMRIH 264
F +L H H + + CD C K + +SN+ H RIH
Sbjct: 476 GFSRPSSLKIHTYSHTG--ERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 50.4 bits (115), Expect = 3e-07
Identities = 20/56 (35%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 266 GERPYNCTYCPKTFISRKNLREHIRT-HTGERPYRCAVCDQEFSQSSSMKRHSKIH 320
G + + C C K F ++LR HIR+ HT E+P+ C +C + FS+ ++++H ++H
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLH 473
Score = 46.4 bits (105), Expect = 6e-06
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 240 KYYKCDVCDKLISSQSNLTLHMR-IHSGERPYNCTYCPKTFISRKNLREHIRTHTGERP 297
K + C C K +L H+R +H+ E+P+ C C K F R NLR+H R H P
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVCI-CGKRFSRRDNLRQHERLHVNASP 478
Score = 39.5 bits (88), Expect = 6e-04
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Query: 201 THVARRHSDRRYICHVCDQPFIDKYNLAQHLIRHNSADRKYYKCDVCDKLISSQSNLTLH 260
T V R + ++C C + F +L +H IR K + C +C K S + NL H
Sbjct: 412 TSVPRSPGGKSFVCPECSKKFKRSEHLRRH-IRSLHTSEKPFVC-ICGKRFSRRDNLRQH 469
Query: 261 MRIHSGERP-YNCTYCPKTFIS 281
R+H P C + P + S
Sbjct: 470 ERLHVNASPRLACFFQPSGYYS 491
Score = 37.9 bits (84), Expect = 0.002
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 182 RRFTCEQCGRKFLTQTVLHTHVARRH-SDRRYICHVCDQPFIDKYNLAQHLIRHNSA 237
+ F C +C +KF L H+ H S++ ++C +C + F + NL QH H +A
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNA 476
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 45.6 bits (103), Expect = 1e-05
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 266 GERPYNCTY--CPKTFISRKNLREHIRTHTGERPYRCAVCDQEFSQSSSMKRHSKIHERQ 323
G+ Y C + C K+F +++ R H R+HT + + C C F++S + RH ++++
Sbjct: 13 GDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRH--VNQKH 70
Query: 324 ITTN 327
+ N
Sbjct: 71 VKQN 74
Score = 34.7 bits (76), Expect = 0.018
Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 242 YKCDV--CDKLISSQSNLTLHMRIHSGERPYNCTYCPKTFISRKNLREHI 289
YKCD C K + + + H R H+ + + C +C +F L H+
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 172 HLETHNEHRERRFTCEQCGRKFLTQTVLHTHVARRH 207
H +H + F C C F VL+ HV ++H
Sbjct: 37 HFRSHTN--SKAFICPHCSSSFTRSDVLNRHVNQKH 70
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 44.8 bits (101), Expect = 2e-05
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 8/61 (13%)
Query: 268 RPYNCTYCPKTFISRKNLREHIRTHTGERPYRCAV-------CDQEFSQSSSMKRH-SKI 319
+ Y C C + F ++L+ HIR+HT E+P+ C+ C ++FS+ + RH KI
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQQKI 127
Query: 320 H 320
H
Sbjct: 128 H 128
Score = 36.7 bits (81), Expect = 0.005
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 10/69 (14%)
Query: 240 KYYKCDVCDKLISSQSNLTLHMRIHSGERPYNC-------TYCPKTFISRKN--LREHIR 290
K Y C+ C + + +L H+R H+ E+P+ C T C + F SR++ LR +
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQF-SRRDLLLRHQQK 126
Query: 291 THTGERPYR 299
H +P R
Sbjct: 127 IHRNPQPRR 135
Score = 25.8 bits (54), Expect = 8.4
Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 210 RRYICHVCDQPFIDKYNLAQHLIRHNSADRKYYKCDVCDKL 250
++Y+C C + F +L +H+ H + K + C D L
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSH--TNEKPFTCSEIDGL 106
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 39.9 bits (89), Expect = 5e-04
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 250 LISSQSNLTLHMRIHSGERPYNCTYCPKTFISRKNLREHIRTHTGERPYRCAVCDQEFSQ 309
++S++ LT I S +R + C C K F +NL H H+ P C C+ + +
Sbjct: 12 VLSAKRKLTEPSLIDS-KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKR 70
Query: 310 SSSMKRH 316
+KRH
Sbjct: 71 KDLLKRH 77
Score = 39.9 bits (89), Expect = 5e-04
Identities = 17/52 (32%), Positives = 24/52 (46%)
Query: 239 RKYYKCDVCDKLISSQSNLTLHMRIHSGERPYNCTYCPKTFISRKNLREHIR 290
++ + CD C K + NLT H HS P C YC + L+ HI+
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQ 79
Score = 29.9 bits (64), Expect = 0.52
Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 12/71 (16%)
Query: 143 IFTCDICNKKFNYLDRFQAHKLEHEGKVTHLETHNEHRERRFTCEQCGRKFLTQTVLHTH 202
+F CD C K+F HE H H+ + C C K + +L H
Sbjct: 30 VFPCDQCAKRFT----------RHENLTRHKACHS--KAEPIPCPYCEIKCKRKDLLKRH 77
Query: 203 VARRHSDRRYI 213
+ R H+D+ I
Sbjct: 78 IQRFHNDKSVI 88
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 181 ERRFTCEQCGRKFLTQTVLHTHVARRHSDRRYICHVCDQPFIDKYNLAQHLIR-HN 235
+R F C+QC ++F L H A C C+ K L +H+ R HN
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHN 83
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 34.3 bits (75), Expect = 0.024
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 11/88 (12%)
Query: 240 KYYKCDV--CDKLISSQSNLTLHMRIHSGERPYNCTYCPKTFISRKNLREHIRTHTGERP 297
K YKC V CDK +Q+ L H ++H P T P + + E+ +P
Sbjct: 348 KPYKCPVPNCDKAYKNQNGLKYH-KLHGHCSPIT-TPTPAPIPHQGFVVEN-------KP 398
Query: 298 YRCAVCDQEFSQSSSMKRHSKIHERQIT 325
YRC VC + + + +K H Q++
Sbjct: 399 YRCEVCSKRYKNLNGLKYHRTHSHLQVS 426
Score = 25.8 bits (54), Expect = 8.4
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 238 DRKYYKCDVCDKLISSQSNLTLHMRIHS 265
+ K Y+C+VC K + + L H R HS
Sbjct: 395 ENKPYRCEVCSKRYKNLNGLKYH-RTHS 421
>SPBC839.12 |rpc31||DNA-directed RNA polymerase III complex subunit
Rpc31|Schizosaccharomyces pombe|chr 2|||Manual
Length = 210
Score = 31.5 bits (68), Expect = 0.17
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 49 ESTEADTSWDDDNDYGNLYIDKNEKEEKRHNDY 81
E + D DDDNDYG Y D E ++ ++DY
Sbjct: 171 EEEDEDFGDDDDNDYGENYFDNGEGDD--YDDY 201
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 29.9 bits (64), Expect = 0.52
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 216 VCDQPFIDKYNLAQHLIRHNSADRKYYKCDVC--DKLISSQSNLTLHMRIHSG 266
+C+ F Y+L +H ++ R ++C++C + S L H+R+ G
Sbjct: 584 ICNTVFSRTYDLIRHQDTIHAKTRPVFRCEICGDQRHFSRHDALVRHLRVKHG 636
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 29.1 bits (62), Expect = 0.90
Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Query: 168 GKVTHLETHNEHRERRF----TCEQCGRKFLTQTVLHTHVA-RRHSD 209
GK+ ++ NE +++ CE C +KF ++ +H+A ++H D
Sbjct: 50 GKILSIQKQNEEVQKKAEFYQNCEVCNKKFYSEGAYSSHMASKKHRD 96
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 144 FTCDICNKKFNYLDRFQAHKLEHEGKVTHLETHNEHRE 181
FTC CN++F L+ +AH + +T +E E
Sbjct: 259 FTCLTCNREFKSLEAVRAHMQQKGHTSIAYDTEDEQLE 296
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 28.3 bits (60), Expect = 1.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 242 YKCDVCDKLISSQSNLTLHMRIH 264
++CD CD + QS LT H R +
Sbjct: 139 FRCDKCDMMFVKQSGLTNHKRTY 161
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 47 KNESTEADTSWDDD--NDYGNLYIDKNEKEEKRHNDYQNFVVKVEKLHPEYN 96
K E +D DD NDY + ++ N + + NF+ +KL+ + N
Sbjct: 269 KGEELRSDLKLKDDTFNDYSSASMELNTSNLRARASFSNFMENEKKLYEKVN 320
>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
Brl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 692
Score = 27.5 bits (58), Expect = 2.8
Identities = 33/136 (24%), Positives = 51/136 (37%), Gaps = 7/136 (5%)
Query: 51 TEADTSWDDDNDYGNLYIDKNEKEEKRHNDYQNFVVKVEKLHPEYNGLPLQ-DFNAETIV 109
+E +T D + +L + + E +R +Y++ V +KL+ + L L+ D +
Sbjct: 16 SEKETRRLDLGEEDDLELFQKEAAWRRSREYEHLTVLEKKLYEYWESLVLKLDHYVAAAL 75
Query: 110 EDIKPKERKL-KIQLKLQGXXXXXXXXXXXXXHFIFTCDICNKKFNYLDRFQAH-----K 163
E+ + +L KI L F D N Y FQAH K
Sbjct: 76 ENHEQSFEELEKITASLYQPDDNLQTLDLSLAEFSLIKDAQNYLNKYASYFQAHEPTLQK 135
Query: 164 LEHEGKVTHLETHNEH 179
L G ET N H
Sbjct: 136 LAKFGSFKLKETPNVH 151
>SPAC1006.05c |och1||alpha-1,6-mannosyltransferase Och1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 396
Score = 27.5 bits (58), Expect = 2.8
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 58 DDDNDYGNLYIDKNEKEEKRHNDYQNFVVKVEKLHPEYNGLPLQDFNAET-IVEDIKPKE 116
++D D Y+ E+EE H+ + KLH Y+ LQDF+ E V I PK+
Sbjct: 72 EEDPDL-EAYLSDLEREELEHSLEELDEENNYKLHLRYSFSQLQDFDEENEAVHMIVPKD 130
>SPBC1703.15c |vps33|SPBC2A9.01c|vacuolar sorting protein
Vps33|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 70 KNEKEEKRHNDYQNFVVKVEKLHPEYNGLPLQDFNAETIVEDIKPKERKLKIQLK 124
+ ++ K N ++FV K+ L E+ L + AET+V+ K + +QL+
Sbjct: 306 EGRRQAKTVNQIRDFVSKLGSLQSEHTSLNIHTGLAETLVQHTKNNYFQKLLQLQ 360
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 27.1 bits (57), Expect = 3.6
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 24 QYSEFKNT-CITSQNALLGLKKSVKNESTEADTSWDDDNDYGNLYIDKNEKEEKRHNDYQ 82
QYS+ ++T I + V E ++D D+ +++D +E+EE R Y+
Sbjct: 402 QYSDVEDTEVIIEDQDNQEISNHVAEEKIDSDEEETIDDAKSEMFVDLSEEEEVR--QYE 459
Query: 83 NFVVKVEKLHPE 94
+ K ++L E
Sbjct: 460 EYRKKQKELQEE 471
>SPBC36.09 |sap61||U2 snRNP-associated protein
sap61|Schizosaccharomyces pombe|chr 2|||Manual
Length = 492
Score = 26.6 bits (56), Expect = 4.8
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 144 FTCDICNKKFNYLDRFQAHK 163
F C++C K F + F+AHK
Sbjct: 243 FYCEVCQKFFGKITVFEAHK 262
>SPBC2D10.06 |rep1|rec16|MBF transcription factor complex subunit
Rep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 472
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 255 SNLTLHMRIHSGERPYNCTYCPKTFISRKNLREH 288
++L H + C YC K F+S L+EH
Sbjct: 405 ADLVFHSSPLLSRSRFICCYCTKPFLSISKLQEH 438
>SPAC139.06 |hat1|SPAC23C4.01|histone acetyltransferase
Hat1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 26.2 bits (55), Expect = 6.4
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 66 LYIDKNEKEEKRHNDYQN 83
L +DK+E+ EK HN Y+N
Sbjct: 330 LQLDKSERIEKIHNAYEN 347
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 26.2 bits (55), Expect = 6.4
Identities = 18/104 (17%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 24 QYSEFKNTCITSQNALLGLKKSVKNESTEADTSWDDD-NDYGNLYIDKNEKEEKRHNDYQ 82
+YS+ + T++ A L+K ++ + ++++D N N+ ++ ++E + +
Sbjct: 346 RYSQALSELETTKRAFAALRKEKSKKTNYSVGAYNEDRNVLSNMLDNERREKEALLQELE 405
Query: 83 NFVVKVEKLHPEYNGLPLQDFNAETIVEDIKPKERKLKIQLKLQ 126
+ V++ K P +P ++ + E ++E ++ L++ + +Q
Sbjct: 406 SLRVQLSKKVP----MPAKNTD-ERVIETLQRSNELLRMDISMQ 444
>SPAC23D3.13c |||guanyl-nucleotide exchange
factor|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1616
Score = 25.8 bits (54), Expect = 8.4
Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 4/85 (4%)
Query: 85 VVKVEKLHP-EYNGLPLQDFNAETIVEDIKPKERKLKIQLKLQGXXXXXXXXXXXXXHFI 143
V+ +HP + P Q FN + + + K K + G F
Sbjct: 720 VITSSSVHPIQTLTAPRQSFNEDLLSANTKNSVYKTSANRSISGGIRLLRKSSEVFYSFS 779
Query: 144 FTCDICNKKFNYLDRFQAHKLEHEG 168
+C+ LDRF KL+H G
Sbjct: 780 ILETVCSCN---LDRFLDSKLDHSG 801
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 25.8 bits (54), Expect = 8.4
Identities = 13/46 (28%), Positives = 25/46 (54%)
Query: 35 SQNALLGLKKSVKNESTEADTSWDDDNDYGNLYIDKNEKEEKRHND 80
S+++ KK K++S + + DD D + DK +K++ + ND
Sbjct: 143 SESSEKSKKKKKKSKSKDDGSEALDDGDIESSEKDKKKKKKSKEND 188
>SPBC106.12c |||THO complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 274
Score = 25.8 bits (54), Expect = 8.4
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 43 KKSVKNESTEADTSWDDDNDYGNLYIDKNEKEEKRHNDYQNFVVKVEKLH 92
+ S ++ S+ D W D D + +KR + F V+VE LH
Sbjct: 44 RASKEHNSSPDDGPWQHDLDQEQDAHPRTTHLQKRQHSENRFGVRVENLH 93
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.321 0.135 0.417
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,593,172
Number of Sequences: 5004
Number of extensions: 68776
Number of successful extensions: 348
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 238
Number of HSP's gapped (non-prelim): 86
length of query: 327
length of database: 2,362,478
effective HSP length: 73
effective length of query: 254
effective length of database: 1,997,186
effective search space: 507285244
effective search space used: 507285244
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 54 (25.8 bits)
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