GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002713-TA|BGIBMGA002713-PA|IPR007648|Mitochondrial
ATPase inhibitor, IATP
         (131 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    25   0.21 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   4.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   5.9  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 25.4 bits (53), Expect = 0.21
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)

Query: 87  KQKEQLANLKGHLNKEIAFHQEQIKRHEDAIRRHKEQMSD 126
           K K  + +L+    K  A H+EQ+ R +  +RR  EQ+++
Sbjct: 92  KAKRFIKSLEERERKH-AVHKEQLSREQRFLRRRLEQLTN 130


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 7/20 (35%), Positives = 12/20 (60%)

Query: 98   HLNKEIAFHQEQIKRHEDAI 117
            ++NK    H+ Q+K  +D I
Sbjct: 1682 NVNKHCTIHRTQVKETDDKI 1701


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 9/33 (27%), Positives = 14/33 (42%)

Query: 13  IQKSRHASVMTDFEDIDDETNDTIRNQAKEFLK 45
           +Q +RH       E +  ETN   R+  +   K
Sbjct: 239 VQSTRHREADDAEESVSSETNHNERSTPRSHAK 271


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.312    0.127    0.343 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,896
Number of Sequences: 429
Number of extensions: 973
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 131
length of database: 140,377
effective HSP length: 51
effective length of query: 80
effective length of database: 118,498
effective search space:  9479840
effective search space used:  9479840
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.0 bits)
S2: 40 (20.2 bits)