Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002712-TA|BGIBMGA002712-PA|IPR003439|ABC transporter
related, IPR003593|AAA ATPase
(312 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 97 3e-21
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po... 61 2e-10
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 49 1e-06
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 49 1e-06
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 48 1e-06
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 48 2e-06
SPBC9B6.09c |mdl1||mitochondrial peptide-transporting ATPase|Sch... 43 6e-05
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 35 0.013
SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter Atm1|S... 35 0.017
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 33 0.052
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 31 0.16
SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit Caf16|Schizos... 31 0.28
SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pm... 30 0.37
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 30 0.49
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 30 0.49
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 29 0.85
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 29 0.85
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 28 1.5
SPAC2G11.11c |prh1||ATP-dependent RNA helicase Prh1|Schizosaccha... 28 1.5
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 28 2.0
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 28 2.0
SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyce... 28 2.0
SPAC3A11.06 |mvp1||sorting nexin Mvp1|Schizosaccharomyces pombe|... 28 2.0
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 27 2.6
SPBC29A10.10c |||tRNA-splicing endonuclease positive effector |S... 27 3.4
SPAC343.15 |||tRNA isopentenyltransferase|Schizosaccharomyces po... 27 3.4
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 27 3.4
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 27 3.4
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 27 3.4
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 27 3.4
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 27 4.5
SPAC458.03 |||nuclear telomere cap complex subunit |Schizosaccha... 27 4.5
SPCC162.11c |||uridine kinase |Schizosaccharomyces pombe|chr 3||... 26 6.0
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 26 6.0
SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr 1|||... 26 7.9
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transporter
Bfr1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1530
Score = 97.1 bits (231), Expect = 3e-21
Identities = 70/232 (30%), Positives = 116/232 (50%), Gaps = 15/232 (6%)
Query: 61 GEFAAIIGPSGAGKTTFLVSLAGKC-TLPFEGTVTINGRNVRDLTGAEI--VPQFDVFTD 117
G+ A++G SGAGKTT L LA + T G + +NGR + V Q DV
Sbjct: 911 GKLTALMGESGAGKTTLLNVLAQRVDTGVVTGDMLVNGRGLDSTFQRRTGYVQQQDVHIG 970
Query: 118 SLTVMEQLVFMTEMKLGNSTKQPNK-SILNTVIEEFKLSAHVE----TXXXXXXXXXXXX 172
TV E L F ++ S K + +VI+ ++ ++ E T
Sbjct: 971 ESTVREALRFSAALRQPASVPLSEKYEYVESVIKLLEMESYAEAIIGTPGSGLNVEQRKR 1030
Query: 173 XXXATSFLSNPQILI-CDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIFKE 231
+ P +L+ DEPT+GLDS +A ++ L+KL+ +G+ ++C++HQPS +F +
Sbjct: 1031 ATIGVELAAKPALLLFLDEPTSGLDSQSAWSIVCFLRKLADAGQAILCTIHQPSAVLFDQ 1090
Query: 232 FNSILLMAEG--NLLFHGTQDACK---SFFESID-LHCPLNYNPAEFYIRAV 277
F+ +LL+ +G + F + K ++FES +HCP + NPAE+ + +
Sbjct: 1091 FDRLLLLQKGGKTVYFGDIGEHSKTLLNYFESHGAVHCPDDGNPAEYILDVI 1142
Score = 52.8 bits (121), Expect = 6e-08
Identities = 64/273 (23%), Positives = 111/273 (40%), Gaps = 21/273 (7%)
Query: 39 KSIWRKVAKPKTVIID-NACIREGEFAAIIGPSGAGKTTFLVSLAGKCT--LPFEGTVTI 95
++I K K ++ +A GE ++G G+G +TFL S+ EGT
Sbjct: 164 RAITEKQVVEKAILSHCHALANAGELVMVLGQPGSGCSTFLRSVTSDTVHYKRVEGTTHY 223
Query: 96 NGRNVRDLTG---AEIV--PQFDVFTDSLTVMEQLVFMTEMKLGNS-----TKQPNKSIL 145
+G + D+ +++ + DV SLT E L F + + N+ T+Q S
Sbjct: 224 DGIDKADMKKFFPGDLLYSGENDVHFPSLTTAETLDFAAKCRTPNNRPCNLTRQEYVSRE 283
Query: 146 NTVIEE-FKLSAHVETXXXXXXXXXXXXX-----XXATSFLSNPQILICDEPTTGLDSYN 199
+I F L+ T + F + P I D T GLDS
Sbjct: 284 RHLIATAFGLTHTFNTKVGNDFVRGVSGGERKRVTISEGFATRPTIACWDNSTRGLDSST 343
Query: 200 ASQVIGILKKLSASGKIV-ICSVHQPSCDIFKEFNSILLMAEGNLLFHGTQDACKSFFES 258
A + + +L+ + K+ + +Q S I+K F+ I ++ G +++G D K +F
Sbjct: 344 AFEFVNVLRTCANELKMTSFVTAYQASEKIYKLFDRICVLYAGRQIYYGPADKAKQYFLD 403
Query: 259 IDLHCPLNYNPAEFYIRAVSNHNGVCIKKMLEN 291
+ C +F + A+S+ +K EN
Sbjct: 404 MGFDCHPRETTPDF-LTAISDPKARFPRKGFEN 435
>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1396
Score = 61.3 bits (142), Expect = 2e-10
Identities = 55/227 (24%), Positives = 102/227 (44%), Gaps = 14/227 (6%)
Query: 34 WTPEEKSIWRKVAKPKTVIIDNACIREGEFAAIIGPSGAGKTTFLVSLAGKCTL-PFEGT 92
W ++ K +K + + + +++ A++G + +GK+ L L+ + EG
Sbjct: 760 WRDLNFTVVTKTSKKQILTNVSGYLKKNTLTALLGENKSGKSVLLRILSQRGIAGSVEGE 819
Query: 93 VTING----RNVRDLTGAEIVPQFDVFTDSLTVMEQLVFMTEMKLGNSTKQPNK-SILNT 147
+T++G +N+R G V + +F TV E L ++ + + +
Sbjct: 820 ITLSGLKNPKNLRKRIG--YVRKNPLFISEYTVRETLRLHAALRQSKQRSLSEQYAYVEY 877
Query: 148 VIEEFKLSAHVE----TXXXXXXXXXXXXXXXATSFLSNP-QILICDEPTTGLDSYNASQ 202
VI+ L + A + P IL+ DEP GLDS +A
Sbjct: 878 VIDFLGLGEVADFIVGDMGKGLSLYHKRLLSIAVELSARPGSILLLDEPANGLDSQSAWM 937
Query: 203 VIGILKKLSASGKIVICSVHQPSCDIFKEFNSILLM-AEGNLLFHGT 248
++ IL+KL+ SG ++CSV QPS I + F+ +L++ GN +++ T
Sbjct: 938 LVCILQKLARSGLSILCSVSQPSSRILELFDMMLILDLNGNTVYYDT 984
Score = 39.1 bits (87), Expect = 8e-04
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Query: 176 ATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSAS-GKIVICSVHQPSCDIFKEFNS 234
A + + P I D DS + ++ +K LS G ++ V Q S IF F+
Sbjct: 230 AQTMCARPLIQCWDNNMRDFDSISVIDILSRIKVLSHKLGTTLVAIVSQASDRIFHMFDM 289
Query: 235 ILLMAEGNLLFHGTQDACKSFF 256
+ LM EG +F+G K +F
Sbjct: 290 VTLMYEGEQIFYGPTSRLKPYF 311
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 48.8 bits (111), Expect = 1e-06
Identities = 52/225 (23%), Positives = 103/225 (45%), Gaps = 27/225 (12%)
Query: 47 KPKTVIIDNACI--REGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLT 104
+P+ +++DN + G+ A++G SG+GK+T ++ L + P G V ++G+++R L
Sbjct: 432 RPEVLVLDNFSLVCPSGKITALVGASGSGKST-IIGLVERFYDPIGGQVFLDGKDLRTLN 490
Query: 105 GAEIVPQFDVFTD-----SLTVMEQLVF-------------MTEMKLGNSTKQPNK-SIL 145
A + Q + + TV E + + E ++ ++ K N +
Sbjct: 491 VASLRNQISLVQQEPVLFATTVFENITYGLPDTIKGTLSKEELERRVYDAAKLANAYDFI 550
Query: 146 NTVIEEFKLSAHVETXXXXXXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIG 205
T+ E+F S +V A + +S+P+IL+ DE T+ LDS + V
Sbjct: 551 MTLPEQF--STNVGQRGFLMSGGQKQRIAIARAVISDPKILLLDEATSALDSKSEVLVQK 608
Query: 206 ILKKLSASGKIVICSVHQPSCDIFKEFNSILLMAEGNLLFHGTQD 250
L S S + I H+ S + ++I+++ G ++ G+ +
Sbjct: 609 ALDNASRS-RTTIVIAHRLS--TIRNADNIVVVNAGKIVEQGSHN 650
Score = 45.6 bits (103), Expect = 9e-06
Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 13/181 (7%)
Query: 55 NACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDV 114
N ++ G+F A +G SG GK+T + L + G V ++G NVRD + Q +
Sbjct: 1141 NLTVKPGQFVAFVGSSGCGKST-TIGLIERFYDCDNGAVLVDGVNVRDYNINDYRKQIAL 1199
Query: 115 FTDSLTVMEQLVFMTEMKLGNSTKQPNKSILNTV----IEEFKL------SAHVETXXXX 164
+ T+ + V + LG S + ++ I EF L +
Sbjct: 1200 VSQEPTLYQGTV-RENIVLGASKDVSEEEMIEACKKANIHEFILGLPNGYNTLCGQKGSS 1258
Query: 165 XXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQP 224
A + + NP+IL+ DE T+ LDS+ + +V+ ++ G+ + H+
Sbjct: 1259 LSGGQKQRIAIARALIRNPKILLLDEATSALDSH-SEKVVQEALNAASQGRTTVAIAHRL 1317
Query: 225 S 225
S
Sbjct: 1318 S 1318
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 48.8 bits (111), Expect = 1e-06
Identities = 60/262 (22%), Positives = 118/262 (45%), Gaps = 23/262 (8%)
Query: 6 LDKVTVTIQVLLDEFENKDAIIVR----NLKVWTPEEKSIWRKVA----KPKTVIID-NA 56
L + + LL+ FE K ++ + +LKV + K I+ V+ K V+ D N
Sbjct: 548 LQNSIIDTERLLEIFEEKPTVVEKPNAPDLKV--TQGKVIFSHVSFAYDPRKPVLSDINF 605
Query: 57 CIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFT 116
+ G+ A++G SG GK+T + L + G++TI+ +++R++T + + V
Sbjct: 606 VAQPGKVIALVGESGGGKSTIMRILLRFFDVN-SGSITIDDQDIRNVTLSSLRSSIGVVP 664
Query: 117 -DSLTVMEQLVFMTEMKLGNSTKQP-----NKSILNTVIEEFK--LSAHVETXXXXXXXX 168
DS + +++ + ++T + + ++ I +F ++ V
Sbjct: 665 QDSTLFNDTILYNIKYAKPSATNEEIYAAAKAAQIHDRILQFPDGYNSRVGERGLKLSGG 724
Query: 169 XXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDI 228
A + L +P I++ DE T+ LD+ Q+ L +L ASG+ I H+ S
Sbjct: 725 EKQRVAVARAILKDPSIILLDEATSALDTNTERQIQAALNRL-ASGRTAIVIAHRLS--T 781
Query: 229 FKEFNSILLMAEGNLLFHGTQD 250
+ IL ++ G ++ GT +
Sbjct: 782 ITNADLILCISNGRIVETGTHE 803
>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 487
Score = 48.4 bits (110), Expect = 1e-06
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 18/189 (9%)
Query: 55 NACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIV----- 109
N IREGE A+ G +G+GKTT L + G F + G+++ TG I
Sbjct: 284 NWTIREGERWALTGSNGSGKTTLLAYVVGDHPKLFASNIKFFGKSIGPGTGISIFDIQEN 343
Query: 110 -----PQF-DVFTDSLTVMEQLV--FMTEMKLGNSTKQPNKSILNTVIEEFKLSAHVETX 161
P+ + F T E L+ + T + T + + +++++EEF+L +
Sbjct: 344 IGHCSPEIHNHFPKQHTCFEALLSAWSTTFTIPKLT-ETRLAAISSILEEFELKDIKDKP 402
Query: 162 XXXXXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGIL-KKLSASGKIVICS 220
+ + P++++ DEP G+D+ L +KLS S +VI S
Sbjct: 403 LSSISVGMQRFILFCRAIVKQPRLVVLDEPFQGVDTKYVHMAHNYLNEKLSPSQAMVIIS 462
Query: 221 VHQ---PSC 226
++ P+C
Sbjct: 463 HYEDELPAC 471
Score = 31.9 bits (69), Expect = 0.12
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 176 ATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLS--ASGKIVI 218
A+ + PQ+L+ DEP GLD + S + +L ++S S KIV+
Sbjct: 160 ASKLVQRPQLLLLDEPYAGLDVTSRSVLSSLLGEMSNHCSPKIVL 204
Score = 27.5 bits (58), Expect = 2.6
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 65 AIIGPSGAGKTTFLVSLAGKCT 86
AIIG +G+G+TTFL + G T
Sbjct: 34 AIIGNTGSGRTTFLRCIQGSFT 55
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 47.6 bits (108), Expect = 2e-06
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRD------LTGAEIVPQ 111
I E AI+G SG+GK+T LV L K T P E + I+G + + L IV Q
Sbjct: 1125 IEAREKVAIVGISGSGKST-LVELLRK-TYPSED-IYIDGYPLTNIDTNWLLKKVAIVDQ 1181
Query: 112 FDVFTDSLTVMEQLVFMTEMKLGNSTKQPNKSILNTVIEEFK--LSAHVETXXXXXXXXX 169
S T++E L++ + + + +K+ + VI+ L +
Sbjct: 1182 KPHLLGS-TILESLLYGVDRDINSVMDALDKTYMTEVIQNLPNGLDTPLLEFSKNFSGGQ 1240
Query: 170 XXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIF 229
A + L NP++LI DE T+ LDS ++ + ++ LS + V+ HQPS +
Sbjct: 1241 IQRLAFARALLRNPRLLILDECTSALDSKSSLLLEKTIQNLSCT---VLIITHQPS--LM 1295
Query: 230 KEFNSILLMAEGNLLFHGTQD 250
K + I++M G + G+ D
Sbjct: 1296 KLADRIIVMDSGIVKESGSFD 1316
Score = 44.8 bits (101), Expect = 2e-05
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 18/176 (10%)
Query: 61 GEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDL----TGAEI--VPQFDV 114
GE IIGPSG+GK+TF +SL + P G + ++ + ++ G+ I V Q V
Sbjct: 462 GELVHIIGPSGSGKSTF-ISLLLRYFSPTYGNIYLDDFPLEEIDEHVLGSTITLVCQQPV 520
Query: 115 FTDSLTVMEQLVFMTEMKLGNSTKQPNKSILN-TVIEEFKL----SAHVETXXXXXXXXX 169
D +T+ E ++ E N+++ + + +++EF L S
Sbjct: 521 IFD-MTIRENIIMRNE----NASESDFEEVCRLALVDEFALTFDQSYDTPCKEASLSGGQ 575
Query: 170 XXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPS 225
A + L + +ILI DEPT+ LD + V+ + + GK + H S
Sbjct: 576 QQRIALARALLRDTEILILDEPTSALDPITKNLVMDAI-RAHRKGKTTLVITHDMS 630
>SPBC9B6.09c |mdl1||mitochondrial peptide-transporting
ATPase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 726
Score = 42.7 bits (96), Expect = 6e-05
Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 15/213 (7%)
Query: 47 KPKTVIIDNAC--IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLT 104
+P I DN I G AI+ PSG GK+T + L + P G + +G ++
Sbjct: 494 RPSASIFDNLSFDIHPGTNVAIVAPSGGGKST-ISQLLLRFYAPSSGKILADGVDISTYN 552
Query: 105 GAEIVPQFDVFTD-----SLTVMEQLVF----MTEMKLGNSTKQPNKSILNTVIEEFKLS 155
+ F + S T+ E + + ++ ++ ++ K+ N S + + E K S
Sbjct: 553 VHQWRSHFGLVGQEPVLFSGTIGENIAYGKSNASQEEIEDAAKRANCSFVLSFPE--KWS 610
Query: 156 AHVETXXXXXXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGK 215
V T A + L NP LI DE T+ LD V ++ L +
Sbjct: 611 TQVGTRGLQLSGGQKQRIAIARALLRNPAFLILDEATSALDGEAEVMVDKTIQSLMHNRS 670
Query: 216 IVICSVHQPSCDIFKEFNSILLMAEGNLLFHGT 248
+ ++ I + + I+++ +G +L G+
Sbjct: 671 MTTITIAHKLATI-RRADQIIVVGDGKVLEQGS 702
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 35.1 bits (77), Expect = 0.013
Identities = 46/214 (21%), Positives = 92/214 (42%), Gaps = 21/214 (9%)
Query: 50 TVIID-NACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLT---- 104
T++ D N I E A++G +G+GK+T ++L + T G + INGR + +
Sbjct: 1227 TILKDVNLHINPSEKVAVVGRTGSGKSTLGLTLL-RFTHRISGEIYINGRETQSVNLNAL 1285
Query: 105 --GAEIVPQFDVFTDSLTVMEQLVFMTEMK---LGNSTKQPN-KSILNTVIEEFK----- 153
+PQ D S TV L E++ L + K S++ ++ K
Sbjct: 1286 RQRISFIPQ-DPILFSGTVRSNLDPFDELEDNFLNEALKTSGASSMIMAHTDDQKPIHIT 1344
Query: 154 LSAHVETXXXXXXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSAS 213
L HV + A + + +I+I DE T +D ++ L++ +
Sbjct: 1345 LDTHVASEGSNFSQGQKQVLALARAIVRRSKIIILDECTASVDDAMDQKIQKTLRE-AFG 1403
Query: 214 GKIVICSVHQPSCDIFKEFNSILLMAEGNLLFHG 247
++C H+ + +++ ++++ +G L+ +G
Sbjct: 1404 DATMLCIAHRLKTIV--DYDKVMVLDKGVLVEYG 1435
Score = 27.9 bits (59), Expect = 2.0
Identities = 10/33 (30%), Positives = 21/33 (63%)
Query: 55 NACIREGEFAAIIGPSGAGKTTFLVSLAGKCTL 87
N + + +IGP+G+GK++ + +L G+ +L
Sbjct: 635 NIVFPRNKLSIVIGPTGSGKSSLISALLGELSL 667
>SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter
Atm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 693
Score = 34.7 bits (76), Expect = 0.017
Identities = 46/205 (22%), Positives = 83/205 (40%), Gaps = 18/205 (8%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSL-------AGKCTLPFEGTVTINGRNVRDLTGAEIVP 110
I G A +G SG GK+T L L +GK + + I ++R G +VP
Sbjct: 466 IPAGAKVAFVGASGCGKSTILRLLFRFYDTDSGKILIDNQRLDQITLNSLRKAIG--VVP 523
Query: 111 Q-FDVFTDSLTVMEQLVFMTEMKLGNS-TKQPNKSILNTVIEEFKLSAHVETXXXXXXXX 168
Q +F D T++ + + + + K+ ++ +IE F +
Sbjct: 524 QDTPLFND--TILYNIGYGNPKASNDEIVEAAKKAKIHDIIESFPEGYQTKVGERGLMIS 581
Query: 169 XXXXXXXATS--FLSNPQILICDEPTTGLDSYNASQVI-GILKKLSASGKIVICSVHQPS 225
A S L NP+IL DE T+ LD+ ++ I + S K + H+
Sbjct: 582 GGEKQRLAVSRLLLKNPEILFFDEATSALDTNTERALLRNINDLIKGSHKTSVFIAHR-- 639
Query: 226 CDIFKEFNSILLMAEGNLLFHGTQD 250
K+ + I ++ +G ++ G+ +
Sbjct: 640 LRTIKDCDIIFVLEKGRVVEQGSHE 664
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 33.1 bits (72), Expect = 0.052
Identities = 37/137 (27%), Positives = 55/137 (40%), Gaps = 17/137 (12%)
Query: 65 AIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTDSL----T 120
AI+G +G GK+T L + G +P EG NV +G ++ D L +
Sbjct: 420 AIVGKNGTGKSTLLNLITG-LLIPIEG-------NVSRYSGLKMAKYSQHSADQLPYDKS 471
Query: 121 VMEQLVFMTEMKLGNSTKQPNKSILNTVIEEFKLSA-HVETXXXXXXXXXXXXXXXATSF 179
+E ++ + K Q +S+L +F LS H + A
Sbjct: 472 PLEYIMDTYKPKFPERELQQWRSVLG----KFGLSGLHQTSEIRTLSDGLKSRVVFAALA 527
Query: 180 LSNPQILICDEPTTGLD 196
L P IL+ DEPT LD
Sbjct: 528 LEQPHILLLDEPTNHLD 544
Score = 30.3 bits (65), Expect = 0.37
Identities = 14/36 (38%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Query: 51 VIIDNACIR--EGEFAAIIGPSGAGKTTFLVSLAGK 84
++I+NA I G+ ++G +G+GK+TFL S+A +
Sbjct: 89 LLIENATIELNHGQRYGLLGDNGSGKSTFLESVAAR 124
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 31.5 bits (68), Expect = 0.16
Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Query: 65 AIIGPSGAGKTTFLVSLAGKCTLPFEGTV 93
AI+GP+GAGK+T + L G+ +P EG V
Sbjct: 723 AILGPNGAGKSTLIKVLIGE-VIPQEGKV 750
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 176 ATSFLSNPQILICDEPTTGLD 196
A +NPQ+L+ DEPT LD
Sbjct: 922 AACLWNNPQLLVLDEPTNFLD 942
>SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit
Caf16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 30.7 bits (66), Expect = 0.28
Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 60 EGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRN 99
+G ++G +GAGK+T L L+GK +L G +++ G++
Sbjct: 29 KGSRTLLVGANGAGKSTLLKLLSGK-SLAKAGHISVGGKD 67
>SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pmc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1292
Score = 30.3 bits (65), Expect = 0.37
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 80 SLAGKCTLPFEGTVTINGRNVRDLTGA---EIVPQFDVFTDSLTVMEQLVFMTEMKLGN 135
++A +C + E +++ G R L+ EI+P+ DV S + +QL+ KLGN
Sbjct: 816 AIASQCGIYTEDGISMEGPEFRSLSDEKRLEILPKLDVLARSSPLDKQLLIEGLQKLGN 874
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 29.9 bits (64), Expect = 0.49
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 13/133 (9%)
Query: 65 AIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTDSLTVMEQ 124
A++GP+GAGKTT L+ L + P G+V + L + Q D+ L+ +E
Sbjct: 624 ALVGPNGAGKTT-LIKLILEKVQPSTGSVVRHHGLRLALFNQHMGDQLDM---RLSAVEW 679
Query: 125 LVFMTEMKLGNSTKQPNKSILNTVIEEFKLSAHVETX-XXXXXXXXXXXXXXATSFLSNP 183
L K GN + + ++ + L+ + A ++ P
Sbjct: 680 L----RTKFGNKP----EGEMRRIVGRYGLTGKSQVIPMGQLSDGQRRRVLFAFLGMTQP 731
Query: 184 QILICDEPTTGLD 196
IL+ DEPT LD
Sbjct: 732 HILLLDEPTNALD 744
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 29.9 bits (64), Expect = 0.49
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 65 AIIGPSGAGKTTFLVSLAGKCTLPFEGTV 93
A+IGP+GAGK+T + L G+ LP G +
Sbjct: 704 AVIGPNGAGKSTLIKVLTGE-LLPTVGEI 731
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 178 SFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVI 218
+ NP IL+ DEPT LD N + + L I++
Sbjct: 562 AMFKNPDILLLDEPTNHLDVVNVAWLENFLVNQKDVSSIIV 602
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 29.1 bits (62), Expect = 0.85
Identities = 11/19 (57%), Positives = 16/19 (84%)
Query: 66 IIGPSGAGKTTFLVSLAGK 84
+ GP G+GKT+FL +LAG+
Sbjct: 247 LYGPPGSGKTSFLYALAGE 265
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 29.1 bits (62), Expect = 0.85
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 180 LSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICS 220
L NP ILI DEPT LD + + +K+ G +++ S
Sbjct: 652 LQNPHILILDEPTNHLDMESMDALTRAVKRF--QGGVILVS 690
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 28.3 bits (60), Expect = 1.5
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 62 EFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFD--VFTDSL 119
+F +IIGP+GAGK+ + +++ L + + + NV++L + Q D FTDS
Sbjct: 26 DFTSIIGPNGAGKSNLMDAIS--FVLGVKSS-HLRSTNVKELIYRGKILQRDNTDFTDSS 82
Query: 120 TVMEQLV-FMTEMKLGNSTKQPNKSILNTVIEEFKLSAHVET 160
V M E+ G ++ ++I + E+K+ + T
Sbjct: 83 NPTTAYVKLMYELDNGEQ-REYKRAITPSGATEYKIDEEIVT 123
>SPAC2G11.11c |prh1||ATP-dependent RNA helicase
Prh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 719
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 54 DNAC--IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTI 95
D C I++ ++G +G+GK+T + +C EG V I
Sbjct: 103 DTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECPYAQEGCVAI 146
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 27.9 bits (59), Expect = 2.0
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 55 NACIREGEFAAIIGPSGAGKTTFLVSLAGK 84
N I +F ++G +G+GK+T ++L G+
Sbjct: 601 NFTIPRNQFTLVVGSTGSGKSTLAMALLGE 630
Score = 27.9 bits (59), Expect = 2.0
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 62 EFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDL 103
E AI+G +G+GK+T ++L + T+ G V ++G ++ L
Sbjct: 1208 EKIAIVGRTGSGKSTMGLTLL-RFTMIMSGAVEVDGIDINSL 1248
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 27.9 bits (59), Expect = 2.0
Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 65 AIIGPSGAGKTTFLVSLA---GKCTL-PFEGTVTINGRNVRDLTGAEIVPQFDVFTDSLT 120
A++GP G GK+T + SL K T+ G +T+ R +T E D
Sbjct: 78 AVMGPPGTGKSTLIKSLVRRYSKYTISQITGPITVVAGKKRRITFLECPNDLSSMIDVAK 137
Query: 121 VMEQLVFMTEMKLG 134
+ + ++ + + G
Sbjct: 138 IADLVLLLIDANFG 151
>SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGK 84
+R+G AI+GPS AGK++ + LA +
Sbjct: 236 LRKGINVAILGPSNAGKSSLINLLANR 262
>SPAC3A11.06 |mvp1||sorting nexin Mvp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 664
Score = 27.9 bits (59), Expect = 2.0
Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Query: 190 EPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIFKEFNSILLMAEGNL--LFHG 247
EP S N + L +A G I ++ D+F+ N +L E + +FH
Sbjct: 8 EPDPWASSSNWGSPVKPLNYKTAIGNSSIPLQYRNYWDVFQANNVLLFPEEESYSDIFHV 67
Query: 248 TQDACKSFFESIDLHCPLNYNPAEFYI 274
QD K FF I+ +F++
Sbjct: 68 PQDVMKEFFTLIESSSNQPLRQIQFFV 94
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 64 AAIIGPSGAGKTTFLVSLAGKCTLPF 89
A + GP G GKT + AG+ +PF
Sbjct: 332 AILSGPPGTGKTLLAKATAGEANVPF 357
>SPBC29A10.10c |||tRNA-splicing endonuclease positive effector
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1944
Score = 27.1 bits (57), Expect = 3.4
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 24 DAIIVRNLKVWTPEEKSIWRK---VAKPKTVIIDNACIREGEFAAIIGPSGAGKTTFLVS 80
DA + R +T ++K K V +P+ I + + +G F I GP G GKT ++
Sbjct: 1247 DANVTRLPSNFTDDKKQKIMKSYGVNEPQAYAIYASSVNDG-FTLIQGPPGTGKTKTILG 1305
Query: 81 LAG 83
+ G
Sbjct: 1306 MIG 1308
>SPAC343.15 |||tRNA isopentenyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 434
Score = 27.1 bits (57), Expect = 3.4
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 11/59 (18%)
Query: 66 IIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTDSLTVMEQ 124
+IG +GAGK+ V LA + G+ IN +++ G FD T+ +TV EQ
Sbjct: 8 VIGTTGAGKSDLAVQLAKRF-----GSQVINADSMQIYRG------FDTITNKITVEEQ 55
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 27.1 bits (57), Expect = 3.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 59 REGEFAAIIGPSGAGKTTFLVSLAGK 84
R G+ ++G +G GK+T L L+GK
Sbjct: 101 RPGQVLGLVGTNGIGKSTALKILSGK 126
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 27.1 bits (57), Expect = 3.4
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 68 GPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQF-DVFTDSLTVMEQLV 126
GP G GKT ++A +C+ F +++ G + + E D+F + +V
Sbjct: 538 GPPGTGKTLLAKAIANECSANF---ISVKGPELLSMWFGESESNVRDIFDKARAAAPCVV 594
Query: 127 FMTEM 131
F+ E+
Sbjct: 595 FLDEL 599
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 27.1 bits (57), Expect = 3.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 66 IIGPSGAGKTTFLVSLAGKCTLPF 89
+ GP G GKT ++AG+ +PF
Sbjct: 305 LTGPPGTGKTMLARAVAGEANVPF 328
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 779
Score = 27.1 bits (57), Expect = 3.4
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 68 GPSGAGKTTFLVSLAGKCTLPFEGTVTINGRN-VRDLTGAEIVPQFDVFTDSLTVMEQLV 126
GP G GKT +LA + +PF ++I+ + V ++G +VF ++ ++ L+
Sbjct: 215 GPPGCGKTMLANALANELGVPF---ISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLM 271
Query: 127 FMTEM 131
F+ E+
Sbjct: 272 FIDEI 276
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1465
Score = 26.6 bits (56), Expect = 4.5
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 55 NACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNV 100
N I E I+G +GAGK+T ++L + P EG + I+ ++
Sbjct: 1247 NIEISPREKIGIVGRTGAGKSTLAMALF-RIIEPTEGKIEIDNEDI 1291
>SPAC458.03 |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 868
Score = 26.6 bits (56), Expect = 4.5
Identities = 12/38 (31%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 114 VFTDSLTVMEQLVFMTEMKLGNSTKQPNKSILNTVIEE 151
+F D LTV +Q++F+ ++ L ++TK P +T ++
Sbjct: 229 LFAD-LTVSDQMLFLNQLLLEHNTKYPTNFSYSTARDD 265
>SPCC162.11c |||uridine kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 454
Score = 26.2 bits (55), Expect = 6.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 59 REGEFAAIIGPSGAGKTTFLVSLAGKCTLP 88
R+ F I GPSG+GKT+ + LP
Sbjct: 19 RKVRFIGIAGPSGSGKTSVAQLIVKALNLP 48
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 26.2 bits (55), Expect = 6.0
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 65 AIIGPSGAGKTTFLVSLAGK 84
A++GP+G GKT + LA +
Sbjct: 136 ALVGPAGVGKTAIMEGLASR 155
>SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 25.8 bits (54), Expect = 7.9
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Query: 53 IDNACIREG-EF-AAIIGPSGAGKTTFLVSL 81
I+ IR G +F ++GPSG+GK+T + +L
Sbjct: 22 INRKLIRRGFQFNVMVVGPSGSGKSTLINTL 52
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.135 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,349,735
Number of Sequences: 5004
Number of extensions: 53873
Number of successful extensions: 250
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 193
Number of HSP's gapped (non-prelim): 61
length of query: 312
length of database: 2,362,478
effective HSP length: 73
effective length of query: 239
effective length of database: 1,997,186
effective search space: 477327454
effective search space used: 477327454
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 54 (25.8 bits)
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