Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002712-TA|BGIBMGA002712-PA|IPR003439|ABC transporter
related, IPR003593|AAA ATPase
(312 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0499 - 3834300-3835255,3836703-3837540,3837636-3837680 120 2e-27
06_03_0710 + 23792138-23792293,23792974-23793257,23794344-237944... 120 2e-27
06_03_0179 - 17604561-17606435 115 6e-26
11_04_0014 - 12253341-12253358,12253520-12253729,12254388-122545... 114 1e-25
05_01_0149 + 989698-991797 114 1e-25
04_01_0490 - 6440176-6440448,6440785-6441074,6441156-6441304,644... 114 1e-25
06_03_1508 - 30653967-30654245,30654342-30654631,30654773-306548... 113 2e-25
04_04_0582 + 26369537-26369914,26371598-26371887,26371985-263721... 112 3e-25
10_08_0489 + 18269824-18270270,18271659-18271948,18272341-182725... 112 4e-25
03_01_0393 - 3062859-3062972,3063027-3063311,3063472-3063759,306... 111 5e-25
05_03_0017 - 7392742-7393110,7393212-7393319,7393522-7394079,739... 109 2e-24
05_01_0147 - 981697-983739 109 2e-24
03_02_0582 + 9624481-9626844 108 6e-24
01_06_1264 + 35854600-35856849 107 1e-23
08_01_0442 + 3922402-3922707,3922940-3923816,3925741-3926831 105 5e-23
09_04_0484 + 17990020-17990488,17990930-17991009,17991122-179915... 104 8e-23
03_02_0583 + 9635002-9637299 104 8e-23
09_02_0499 - 9917891-9918148,9918240-9918494,9918769-9918940,991... 104 1e-22
08_02_1457 + 27260841-27260965,27261126-27261246,27263455-272635... 102 3e-22
09_02_0501 - 9955987-9956244,9956329-9956583,9956713-9956884,995... 101 6e-22
09_04_0037 + 13992103-13992624,13993001-13993180,13993423-139936... 101 7e-22
01_05_0117 - 18300157-18301106,18301149-18301543,18302592-183026... 100 2e-21
10_08_0173 + 15414628-15414890,15415001-15415074,15416322-154164... 100 3e-21
01_05_0662 - 24103475-24103735,24103831-24104085,24104280-241044... 99 5e-21
01_05_0658 - 24043655-24043945,24044003-24044257,24044359-240445... 99 5e-21
01_01_0134 - 1224084-1224269,1224578-1224662,1224763-1225050,122... 98 7e-21
09_02_0504 - 10013784-10014041,10014558-10014660,10014932-100150... 97 1e-20
01_05_0660 - 24071523-24071780,24071873-24072127,24072209-240723... 97 2e-20
01_06_0556 + 30207124-30207581,30207692-30207901,30208016-302081... 97 2e-20
01_05_0659 - 24061318-24061575,24061664-24061918,24062001-240621... 96 4e-20
12_01_0833 - 7730761-7731030,7731171-7731425,7731565-7731736,773... 95 5e-20
01_03_0179 + 13500413-13500768,13502522-13502642,13502876-135029... 95 5e-20
08_02_0520 - 18121561-18121821,18122216-18122470,18122560-181227... 94 1e-19
02_02_0009 + 6068260-6068591,6068797-6068917,6069034-6069122,606... 94 1e-19
01_05_0703 - 24404580-24406373 94 1e-19
07_01_0663 + 4975950-4977688,4978183-4978528 92 5e-19
02_04_0067 - 19425019-19425288,19425393-19425647,19425766-194259... 92 5e-19
09_04_0483 + 17979566-17980019,17980242-17980321,17980431-179808... 91 8e-19
12_02_0037 - 12613686-12614318,12614792-12614878,12614985-126151... 90 2e-18
03_06_0759 - 36059872-36059928,36059934-36060125,36060241-360603... 90 2e-18
01_01_0548 - 4033077-4033349,4034007-4034261,4034362-4034533,403... 89 3e-18
06_03_0437 - 20765682-20765951,20766040-20766294,20766374-207665... 86 3e-17
09_01_0129 - 1954470-1955129,1956285-1956371,1956475-1956663,195... 83 2e-16
05_04_0148 - 18426903-18427106,18430516-18430594,18430752-184309... 83 2e-16
10_03_0021 + 7129786-7130117,7130227-7130347,7131048-7131136,713... 83 3e-16
07_01_1182 + 11207282-11207330,11208015-11208094,11208181-112086... 81 1e-15
09_02_0067 - 3812508-3813158,3813944-3814030,3814124-3814312,381... 78 8e-15
08_02_0582 + 18993816-18993890,18994050-18994446,18995645-189957... 74 1e-13
12_02_0031 - 12477787-12478413,12480182-12480268,12480371-124805... 72 5e-13
02_02_0654 - 12662931-12663200,12663296-12663550,12664097-126642... 68 8e-12
07_03_0635 + 20151861-20152249,20152589-20152709,20154914-201549... 68 1e-11
09_02_0496 - 9892242-9892499,9892956-9893045,9893046-9893094,989... 67 2e-11
02_02_0028 + 6196453-6196512,6196936-6197320,6197843-6197925,619... 66 3e-11
11_06_0223 - 21419128-21419397,21419493-21419747,21420243-214204... 64 1e-10
08_02_0580 - 18953208-18953513,18953668-18953868,18953929-189540... 63 2e-10
08_02_0581 + 18986084-18986176,18986284-18986668,18986779-189868... 58 1e-08
01_07_0370 - 43119049-43120278,43121376-43121420,43121421-431216... 56 3e-08
01_06_0365 + 28767538-28767696,28768299-28768520,28768630-287688... 56 5e-08
06_01_0421 - 3000486-3000595,3000909-3001148,3001659-3001722,300... 54 1e-07
09_03_0029 + 11724581-11724583,11726413-11726610,11726874-117270... 53 3e-07
03_02_0569 - 9528027-9529256,9530019-9530260,9530374-9531161,953... 53 3e-07
11_01_0346 - 2589111-2589220,2589613-2589852,2589956-2590028,259... 51 1e-06
06_01_0193 - 1491710-1491739,1492194-1492319,1492631-1492766,149... 51 1e-06
06_03_0611 - 22721977-22722276,22722765-22722853,22722978-227230... 50 2e-06
03_06_0004 + 30936670-30936726,30936858-30936905,30937045-309370... 49 6e-06
02_05_0385 - 28506326-28506891,28506993-28507405,28507496-285077... 48 7e-06
08_01_0345 + 3055522-3055827,3055968-3056022,3056744-3056919,305... 47 2e-05
08_01_0344 + 3043824-3044123,3044260-3044314,3044810-3044985,304... 46 3e-05
04_04_1331 - 32706043-32707248,32707411-32707652,32707737-327085... 46 4e-05
01_06_0555 - 30182818-30183169,30183268-30183674,30183804-301847... 46 4e-05
02_01_0668 - 4969141-4970520,4970597-4971463 46 5e-05
04_04_0118 - 22889608-22890816,22891990-22892261,22892306-228931... 45 9e-05
03_04_0206 - 18493178-18495310 44 2e-04
05_07_0004 + 26990250-26990516,26990877-26990931,26991286-269914... 44 2e-04
11_04_0359 + 16735204-16735676,16736597-16736647,16736860-167369... 43 3e-04
02_01_0672 - 4989053-4990432,4990523-4991410,4995896-4996436,499... 43 3e-04
05_07_0003 + 26981956-26982190,26982258-26982318,26982739-269828... 42 6e-04
02_01_0670 - 4976658-4978037,4978128-4979015,4982590-4983130,498... 42 6e-04
08_02_1616 + 28260204-28262555 41 0.001
05_02_0030 + 5826065-5826092,5826307-5828309,5828412-5828732,582... 41 0.001
03_05_0628 - 26245714-26245755,26245854-26245938,26246022-262461... 41 0.001
01_05_0215 + 19374279-19374327,19374629-19374633,19376902-193769... 41 0.001
06_01_0591 + 4261483-4261631,4261837-4262007,4262127-4262226,426... 41 0.001
09_02_0068 - 3832858-3833228,3835773-3836223 40 0.003
03_02_0898 - 12246747-12246833,12247425-12247601,12248054-122481... 40 0.003
01_06_0371 + 28819035-28819322,28820541-28820595,28821179-288213... 40 0.003
04_04_1439 + 33614112-33614123,33614278-33615649,33615705-33616141 39 0.004
01_06_0366 - 28779899-28780543,28780813-28781076,28781165-287814... 39 0.004
07_03_0293 + 16321539-16321893,16322020-16322207,16322881-163229... 39 0.006
01_05_0212 + 19347142-19347444,19348853-19348907,19349117-193492... 39 0.006
07_01_1181 + 11203073-11203604,11204124-11204143 38 0.008
04_01_0568 - 7279478-7279590,7279749-7279988,7280078-7280141,728... 38 0.008
01_06_1760 - 39697079-39697162,39697280-39697340,39697415-396974... 38 0.010
02_02_0682 - 12923103-12923747,12924607-12924870,12924953-129252... 38 0.014
12_02_0038 - 12630564-12630580,12630789-12631260 37 0.018
08_02_1615 + 28257275-28258428,28258523-28259144 37 0.018
05_01_0271 + 2105122-2105470,2105557-2105954,2106035-2106273,210... 37 0.018
01_06_1699 - 39269477-39269574,39269690-39269929,39270029-392700... 36 0.032
01_02_0042 - 10513799-10514152,10514252-10514545,10514630-105148... 36 0.032
12_02_0781 + 23105554-23106855,23107191-23107511,23107581-231076... 36 0.042
04_03_0867 - 20414999-20415160,20415255-20415384,20415515-204157... 36 0.042
01_03_0260 - 14323503-14323603,14323751-14323990,14324212-143242... 36 0.042
05_01_0163 - 1125364-1125422,1126062-1126205,1126640-1126756,112... 35 0.073
09_01_0131 - 1966406-1966425,1967469-1967901 35 0.097
04_04_1232 - 31956286-31956463,31957822-31957880,31959343-319593... 35 0.097
04_04_0271 + 24069218-24069433,24069695-24070365,24070458-24073410 34 0.13
01_06_1488 + 37716986-37717076,37717424-37717558,37717755-377178... 34 0.13
03_01_0577 + 4261249-4262055,4262149-4262203,4262293-4262468,426... 34 0.17
06_03_0473 + 21190878-21191188,21191269-21192355,21192972-211931... 33 0.29
11_06_0325 + 22376195-22377001,22377136-22377525,22377638-223777... 32 0.52
08_02_1614 - 28243532-28244589,28245149-28245383,28245524-282457... 32 0.68
02_02_0464 - 10552347-10552466,10552683-10552928,10553866-105541... 31 0.90
01_01_0832 - 6500139-6500333,6500610-6500875,6501494-6501815,650... 31 0.90
04_01_0567 - 7263744-7263922,7264020-7264259,7264919-7264982,726... 31 1.2
08_02_0538 - 18321101-18321128,18321767-18322587 31 1.6
06_03_1249 - 28688997-28689248,28689469-28689533,28690016-286900... 31 1.6
04_04_1183 - 31537196-31537290,31537665-31537986,31538176-315382... 31 1.6
09_06_0365 - 22582467-22583524,22584407-22584641,22585474-225856... 30 2.1
02_05_1169 + 34656450-34656603,34657321-34657481,34657907-346579... 30 2.1
09_05_0006 - 20030673-20030895,20031432-20031478,20031597-200316... 30 2.7
03_01_0300 + 2350232-2352274,2352349-2352669,2352752-2352838,235... 30 2.7
02_03_0314 - 17600970-17600974,17601230-17601357,17601832-176019... 30 2.7
01_05_0430 + 22078651-22078677,22079269-22079356,22079669-220799... 30 2.7
06_03_1068 - 27341103-27341444,27341689-27341929,27342030-273423... 29 3.6
04_04_0171 - 23282840-23283036,23283360-23283660,23283747-232840... 29 3.6
01_06_1310 - 36176008-36176472,36176547-36176774,36177313-361780... 29 3.6
01_05_0429 + 22070636-22070662,22071490-22071577,22071908-220721... 29 3.6
10_08_0185 + 15578607-15578845,15580422-15580536,15580656-155807... 29 4.8
10_01_0172 - 1928648-1930751,1932019-1932243,1933709-1934676 29 4.8
05_05_0098 + 22373384-22373522,22373566-22373772,22373879-223739... 29 4.8
04_04_0961 + 29715938-29716034,29716918-29717133,29717438-297177... 29 4.8
03_02_0153 - 5961910-5962441,5962779-5963128,5963415-5963681,596... 29 4.8
02_01_0063 - 451471-451725,451825-451913,452028-452133,452214-45... 29 4.8
08_01_0404 - 3590296-3590409,3590529-3590819,3592414-3592461,359... 29 6.3
06_01_0876 - 6712224-6712812,6713777-6715233 29 6.3
11_06_0348 - 22561589-22563656,22563788-22564602 28 8.4
11_06_0031 + 19425011-19425113,19425552-19425637,19425732-194258... 28 8.4
11_01_0060 + 453615-454030,454086-455862 28 8.4
01_07_0299 + 42594363-42594424,42594516-42594798,42595185-425954... 28 8.4
>11_01_0499 - 3834300-3835255,3836703-3837540,3837636-3837680
Length = 612
Score = 120 bits (289), Expect = 2e-27
Identities = 77/226 (34%), Positives = 113/226 (50%), Gaps = 12/226 (5%)
Query: 59 REGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRN----VRDLTGAEIVPQFDV 114
R GE A++GPSG+GK+T L L G+ GTV GR V+ TG V Q DV
Sbjct: 67 RPGEVLAVLGPSGSGKSTLLSILGGRLAGRHAGTVLAGGRAPCRAVQRRTG--FVAQDDV 124
Query: 115 FTDSLTVMEQLVFMTEMKLGNSTKQPNKSIL-NTVIEEFKLSAHVETXXXXXXXXXXXXX 173
LTV E L+F ++L S+ K+ VI E L+ +T
Sbjct: 125 LHPHLTVRETLLFCAMLRLPASSPAAAKAAAAEAVIAELGLAPCADTIVGNAFVRGVSGG 184
Query: 174 -----XXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDI 228
L NP +L+ DEPT+GLDS A++++ L L+ G+ V+ SVHQPS +
Sbjct: 185 ERKRVSIGHELLVNPSLLVLDEPTSGLDSTAAARLVATLSSLARRGRTVVMSVHQPSTRV 244
Query: 229 FKEFNSILLMAEGNLLFHGTQDACKSFFESIDLHCPLNYNPAEFYI 274
++ F+S+LL+AEG L+ G +F ++ + NPA+F +
Sbjct: 245 YRMFDSVLLLAEGTCLYFGAGRDAMDYFAAVGFSPAFHVNPADFML 290
>06_03_0710 +
23792138-23792293,23792974-23793257,23794344-23794499,
23795318-23795804,23795864-23796181,23796773-23797165,
23797752-23798021
Length = 687
Score = 120 bits (289), Expect = 2e-27
Identities = 77/234 (32%), Positives = 122/234 (52%), Gaps = 11/234 (4%)
Query: 61 GEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEI--VPQFDVFTDS 118
GE A++GPSG+GKTT L L G+ + +G +T N I V Q DV
Sbjct: 101 GEILALMGPSGSGKTTLLKILGGRLSGGVKGQITYNDTPYSPCLKRRIGFVTQDDVLFPQ 160
Query: 119 LTVMEQLVFMTEMKL-GNSTKQPNKSILNTVIEEFKLSA--HVETXXXXXXXXXXXXXXX 175
LTV E LVF ++L +KQ + ++ +I E L H +
Sbjct: 161 LTVEETLVFAAFLRLPARMSKQQKRDRVDAIITELNLERCRHTKIGGAFVRGVSGGERKR 220
Query: 176 AT---SFLSNPQILICDEPTTGLDSYNASQVIGILKKL--SASGKIVICSVHQPSCDIFK 230
+ L +P +L+ DEPT+GLDS +A++++ +L++L SA+ + VI ++HQPS +F
Sbjct: 221 TSIGYEILVDPSLLLLDEPTSGLDSTSAAKLLVVLRRLARSAARRTVITTIHQPSSRMFH 280
Query: 231 EFNSILLMAEGNLLFHGTQDACKSFFESIDLHCPLNYNPAEFYI-RAVSNHNGV 283
F+ +LL+AEG+ ++HG C F ++ + NPAEF + A N +G+
Sbjct: 281 MFDKLLLVAEGHAIYHGGARGCMRHFAALGFSPGIAMNPAEFLLDLATGNLDGI 334
>06_03_0179 - 17604561-17606435
Length = 624
Score = 115 bits (276), Expect = 6e-26
Identities = 73/237 (30%), Positives = 122/237 (51%), Gaps = 10/237 (4%)
Query: 48 PKTVIID-NACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGA 106
P+ ++ D + R GE A++GPSGAGK+T L LA + T P G + +N +R +
Sbjct: 75 PEYILRDVSLTARPGEILAVVGPSGAGKSTLLDILAAR-TAPTHGRLLLNAAPLRPSSFR 133
Query: 107 EI---VPQFDVFTDSLTVMEQLVFMTEMKLGNSTKQPNKSILNTVIEEFKL--SAHVETX 161
+ VPQ DV LTV E F + L + + + ++ ++ + +L +AH
Sbjct: 134 RLSAHVPQMDVALPLLTVAETFAFAASL-LYPAAAEASAAVA-ALLADLRLGHAAHTRVS 191
Query: 162 XXXXXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSAS-GKIVICS 220
+ L +P +L+ DEPT+GLDS +A V+G L+ ++A+ G V+ S
Sbjct: 192 ATRLSGGERRRVSIGLALLRDPGVLLLDEPTSGLDSSSAHVVVGCLRAVAAARGTTVVLS 251
Query: 221 VHQPSCDIFKEFNSILLMAEGNLLFHGTQDACKSFFESIDLHCPLNYNPAEFYIRAV 277
+HQPS + +S+LL++ G ++ HG+ D+ + S L P NP EF + +
Sbjct: 252 IHQPSSRLLSAVDSLLLLSRGAVVHHGSVDSLDAALLSHGLAVPAQLNPLEFALEVL 308
>11_04_0014 -
12253341-12253358,12253520-12253729,12254388-12254523,
12254631-12254752,12254789-12254842,12254872-12255161,
12255737-12255948,12256008-12256475,12256560-12256856,
12257467-12258329,12258417-12258490,12258616-12258650,
12259024-12259087,12259452-12259733,12259870-12259946,
12260045-12260325
Length = 1160
Score = 114 bits (274), Expect = 1e-25
Identities = 75/243 (30%), Positives = 122/243 (50%), Gaps = 13/243 (5%)
Query: 44 KVAKPKTVIIDNACIREGEFAAIIGPSGAGKTTFLVSLAGKCT-LPFEGTVTINGRNVRD 102
K +K K + +R G AA++GPSGAGKTTFL ++AGK T G V ING+ V
Sbjct: 467 KGSKKKLLRSVTGKLRPGRVAAVMGPSGAGKTTFLSAIAGKATGCETSGMVLINGK-VEP 525
Query: 103 LTGAE----IVPQFDVFTDSLTVMEQLVFMTEMKLGNSTKQPNKS-ILNTVIEEFKLSAH 157
+ + VPQ D+ +LTV E L F +L + +K ++ VIE L A
Sbjct: 526 IRAYKRIIGFVPQDDIVHGNLTVQENLWFNARCRLSADMSKADKVLVVERVIESLGLQAV 585
Query: 158 VETXXXXXXXXXXXXXXX-----ATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSA 212
++ + P +LI DEPT+GLDS ++ ++ L++ +
Sbjct: 586 RDSLVGTVEQRGISGGQRKRVNVGLEMVMEPSVLILDEPTSGLDSASSLLLLRALRREAL 645
Query: 213 SGKIVICSVHQPSCDIFKEFNSILLMAEGNL-LFHGTQDACKSFFESIDLHCPLNYNPAE 271
G + VHQPS +++ F+ ++L+A+G + ++HG + +F + + P NP +
Sbjct: 646 EGVNISMVVHQPSYTLYRMFDDLILLAKGGMTVYHGPVKKVEEYFTGLGITVPERVNPPD 705
Query: 272 FYI 274
+YI
Sbjct: 706 YYI 708
>05_01_0149 + 989698-991797
Length = 699
Score = 114 bits (274), Expect = 1e-25
Identities = 72/229 (31%), Positives = 116/229 (50%), Gaps = 10/229 (4%)
Query: 59 REGEFAAIIGPSGAGKTTFLVSLAGKCTLP-FEGTVTINGRNV--RDLTG-AEIVPQFDV 114
R+GE A++G SG+GK+T + +LAG+ G V +NG + R L + V Q D+
Sbjct: 87 RDGELFAVMGASGSGKSTLVDALAGRIARESLRGAVELNGEPLHGRRLRAISAYVMQDDL 146
Query: 115 FTDSLTVMEQLVFMTEMKLGNSTKQPNKSI-LNTVIEEFKLSAHVETXXXXXXXXXXXXX 173
LTV E L+F E +L + K ++ +I++ L+ +T
Sbjct: 147 LYPMLTVRETLLFAAEFRLPRALSPDKKRARVDALIDQLGLARAADTIIGDEAHRGVSGG 206
Query: 174 -----XXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDI 228
T + +P +L DEPT+GLDS +A V+ +L++++ SG +VI ++HQPS I
Sbjct: 207 ERRRVSIGTDIVHDPILLFLDEPTSGLDSASAFMVVQVLRRIAQSGSVVIMTIHQPSARI 266
Query: 229 FKEFNSILLMAEGNLLFHGTQDACKSFFESIDLHCPLNYNPAEFYIRAV 277
+ +LL++ G ++ GT K FF P N NPAEF + +
Sbjct: 267 LNILDRLLLLSRGRTVYAGTPVGLKPFFSEFGDPIPDNENPAEFALDTI 315
>04_01_0490 -
6440176-6440448,6440785-6441074,6441156-6441304,
6441432-6441890,6441973-6442269,6442604-6443502,
6443793-6443827,6443984-6444078,6444184-6444247,
6446099-6446175,6446330-6446514
Length = 940
Score = 114 bits (274), Expect = 1e-25
Identities = 79/249 (31%), Positives = 125/249 (50%), Gaps = 11/249 (4%)
Query: 37 EEKSIWRKVAKPKTVIIDNACIREGEFAAIIGPSGAGKTTFLVSLAGKCT-LPFEGTVTI 95
E K + + K K + N +R G A++GPSGAGKTTFL ++ GK G+V +
Sbjct: 353 EFKDLTLSLGKKKLLRSINGELRPGRVTAVMGPSGAGKTTFLNAVTGKVAGYKVSGSVLV 412
Query: 96 NGR--NVRDLTGA-EIVPQFDVFTDSLTVMEQLVFMTEMKLGNSTKQPNKSI-LNTVIEE 151
NGR N+R VPQ DV +LTV E L F + +L +T +K + + VI+
Sbjct: 413 NGRHDNIRSYKKIIGFVPQDDVVHGNLTVEENLWFSAKCRLSATTAHRHKVLTVERVIDS 472
Query: 152 FKL----SAHVETXXXXXXXXXXXXXXXA-TSFLSNPQILICDEPTTGLDSYNASQVIGI 206
L S+ V T + P +LI DEPT+GLDS ++ ++
Sbjct: 473 LDLQGVRSSLVGTVEKRGISGGQRKRVNVGIEMVMEPSLLILDEPTSGLDSSSSQLLLRA 532
Query: 207 LKKLSASGKIVICSVHQPSCDIFKEFNSILLMAEGNLL-FHGTQDACKSFFESIDLHCPL 265
L+ + G V VHQPS ++ F+ ++L+A+G L+ ++G + + +F ++ + P
Sbjct: 533 LRHEALEGVNVCAVVHQPSYTLYNMFDDLILLAKGGLIVYNGPVKSVEDYFSTLGITVPE 592
Query: 266 NYNPAEFYI 274
NP + YI
Sbjct: 593 RVNPPDHYI 601
>06_03_1508 -
30653967-30654245,30654342-30654631,30654773-30654841,
30654854-30654921,30655016-30655492,30655578-30655874,
30655974-30656824,30656917-30656990,30657270-30657292,
30657709-30657772,30658098-30658370,30658511-30658587,
30658686-30658912
Length = 1022
Score = 113 bits (271), Expect = 2e-25
Identities = 77/244 (31%), Positives = 121/244 (49%), Gaps = 15/244 (6%)
Query: 44 KVAKPKTVIIDNACIREGEFAAIIGPSGAGKTTFLVSLAGKCT-LPFEGTVTING----- 97
K +K K + + G AA++GPSGAGKTTFL ++AGK T G V ING
Sbjct: 438 KGSKKKLLRSVTGKLMPGRVAAVMGPSGAGKTTFLSAIAGKATGCETTGMVLINGKMEPI 497
Query: 98 RNVRDLTGAEIVPQFDVFTDSLTVMEQLVFMTEMKLGNSTKQPNKS-ILNTVIEEFKLSA 156
R + + G VPQ D+ +LTV E L F +L + +K ++ VIE L A
Sbjct: 498 RAYKKIIG--FVPQDDIVHGNLTVQENLWFNARCRLSADMSKADKVLVVERVIEALGLQA 555
Query: 157 HVETXXXXXXXXXXXXXXX-----ATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLS 211
++ + P +LI DEPT+GLDS ++ ++ L++ +
Sbjct: 556 VRDSLVGTVEQRGISGGQRKRVNVGLEMVMEPSVLILDEPTSGLDSSSSLLLLRALRREA 615
Query: 212 ASGKIVICSVHQPSCDIFKEFNSILLMAEGNL-LFHGTQDACKSFFESIDLHCPLNYNPA 270
G + VHQPS ++K F+ ++L+A+G L ++HG + +F + + P NP
Sbjct: 616 LEGVNISMVVHQPSYTLYKMFDDLILLAKGGLTVYHGPVKKVEEYFSGLGIVVPDRVNPP 675
Query: 271 EFYI 274
++YI
Sbjct: 676 DYYI 679
>04_04_0582 +
26369537-26369914,26371598-26371887,26371985-26372156,
26372271-26372393,26372499-26372627,26372785-26372979,
26373128-26373214,26373296-26373568,26374166-26374273,
26374363-26374686
Length = 692
Score = 112 bits (270), Expect = 3e-25
Identities = 74/243 (30%), Positives = 120/243 (49%), Gaps = 10/243 (4%)
Query: 47 KPKTVIIDNACIRE-GEFAAIIGPSGAGKTTFLVSLAGKCTLP--FEGTVTINGRNVRDL 103
K +TV+ + E G A++GPSG+GK+T L +LAG+ G V +NGR +
Sbjct: 63 KTQTVLDELTGYAEPGSLTALMGPSGSGKSTLLDALAGRLAANAFLSGNVLLNGRKAKLS 122
Query: 104 TGAEI-VPQFDVFTDSLTVMEQLVFMTEMKLGNSTKQPNK-SILNTVIEEFKLSAHVETX 161
GA V Q D +LTV E + + ++L + + +K +++ I E L +T
Sbjct: 123 FGAAAYVTQDDNLIGTLTVRETIGYSAMLRLPDKMPREDKRALVEGTIVEMGLQDCADTV 182
Query: 162 XXX-----XXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKI 216
A L P++L DEPT+GLDS +A V L+ L+ G+
Sbjct: 183 IGNWHLRGVSGGEKRRVSIALELLMRPRLLFLDEPTSGLDSSSAFFVTQTLRGLARDGRT 242
Query: 217 VICSVHQPSCDIFKEFNSILLMAEGNLLFHGTQDACKSFFESIDLHCPLNYNPAEFYIRA 276
VI S+HQPS ++F+ F+ + L++ G ++ G FF CP NP++ ++R
Sbjct: 243 VIASIHQPSSEVFELFDMLFLLSSGKTVYFGQASQACEFFAQTGFPCPPLRNPSDHFLRC 302
Query: 277 VSN 279
V++
Sbjct: 303 VNS 305
>10_08_0489 +
18269824-18270270,18271659-18271948,18272341-18272512,
18272608-18272730,18272832-18272960,18273061-18273255,
18273384-18273470,18273563-18273835,18274047-18274154,
18274769-18275116
Length = 723
Score = 112 bits (269), Expect = 4e-25
Identities = 70/227 (30%), Positives = 111/227 (48%), Gaps = 9/227 (3%)
Query: 61 GEFAAIIGPSGAGKTTFLVSLAGKCTLP--FEGTVTINGRNVRDLTGAEI-VPQFDVFTD 117
G A++GPSG+GK+T L +LAG+ +GTV +NGR GA V Q D
Sbjct: 101 GTITALMGPSGSGKSTLLDALAGRLAANAFLDGTVLLNGRKANLSFGAAAYVTQDDNLIG 160
Query: 118 SLTVMEQLVFMTEMKLGNSTKQPNK-SILNTVIEEFKLSAHVETXXXX-----XXXXXXX 171
+LTV E + + ++L + K +++ I E L +T
Sbjct: 161 TLTVRETISYSARLRLPDKMPMEEKRALVEGTIVEMGLQDCADTVVGNWHLRGISGGEKR 220
Query: 172 XXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIFKE 231
A L P++L DEPT+GLDS +A V L+ L+ G+ VI S+HQPS ++F+
Sbjct: 221 RVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRGLARDGRTVIASIHQPSSEVFEL 280
Query: 232 FNSILLMAEGNLLFHGTQDACKSFFESIDLHCPLNYNPAEFYIRAVS 278
F+ + L++ G ++ G FF CP NP++ ++R ++
Sbjct: 281 FDRLYLLSGGKTVYFGLASEACQFFAQAGFPCPPLRNPSDHFLRCIN 327
>03_01_0393 -
3062859-3062972,3063027-3063311,3063472-3063759,
3063844-3064161,3064232-3064415,3064504-3064659,
3066394-3066620,3066734-3066804,3067090-3067534
Length = 695
Score = 111 bits (268), Expect = 5e-25
Identities = 77/242 (31%), Positives = 115/242 (47%), Gaps = 11/242 (4%)
Query: 61 GEFAAIIGPSGAGKTTFLVSLAGKCTLP--FEGTVTINGRNVRDLTGAEI--VPQFDVFT 116
GE A++GPSG+GKTT L L G+ P EG V+ N I V Q DV
Sbjct: 200 GEVLALMGPSGSGKTTLLSILGGRVAGPGDVEGCVSYNDEPYCKSLNRRIGFVTQDDVLF 259
Query: 117 DSLTVMEQLVFMTEMKLGNS-TKQPNKSILNTVIEEFKLSAHVETXXXXXXXXXXXXXXX 175
LTV E L + ++L + T+Q + +I E L +T
Sbjct: 260 THLTVKETLTYAALLRLPRTMTRQEKEERTIDIIYELGLERCQDTMIGGSFVRGVSGGER 319
Query: 176 -----ATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIFK 230
+ NP +L DEPT+GLDS A ++I +L ++ GK VI ++HQPS +F
Sbjct: 320 KRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIIQLLHDIAEDGKTVITTIHQPSSRLFH 379
Query: 231 EFNSILLMAEGNLLFHGTQDACKSFFESIDLHCPLNYNPAEFYI-RAVSNHNGVCIKKML 289
+F+ ++L+ G+LL+ G +F+SI + NPAEF + A N V + L
Sbjct: 380 KFDKLILLGRGSLLYFGKASEAMPYFQSIGCTPLIAMNPAEFLLDLANGNTTDVSVPSEL 439
Query: 290 EN 291
++
Sbjct: 440 DD 441
>05_03_0017 -
7392742-7393110,7393212-7393319,7393522-7394079,
7394186-7394311,7394396-7394521,7394673-7395137,
7396822-7396901,7397394-7397664
Length = 700
Score = 109 bits (263), Expect = 2e-24
Identities = 67/228 (29%), Positives = 116/228 (50%), Gaps = 10/228 (4%)
Query: 61 GEFAAIIGPSGAGKTTFLVSLAGKCT--LPFEGTVTINGRNVR-DLTGAEIVPQFDVFTD 117
G AI+GPSG+GK+T L +L+G+ + G V +NG+ R D V Q +V
Sbjct: 69 GRVVAIMGPSGSGKSTLLDALSGRLARNVLLTGKVLLNGKKRRLDYGVLAYVTQENVLLG 128
Query: 118 SLTVMEQLVFMTEMKLGNS-TKQPNKSILNTVIEEFKLSAHVETXXXX-----XXXXXXX 171
+LTV E + + ++L ++ +K + +++ ++E L +
Sbjct: 129 TLTVRETVTYSALLRLPSTMSKAEVRRVVDDTLDEMGLRECADRNIGNWHLRGISGGEKK 188
Query: 172 XXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASG-KIVICSVHQPSCDIFK 230
A L+ P++L DEPT+GLDS +A VI L++L+ G + ++ SVHQPS ++F
Sbjct: 189 RLSIALEILTRPRLLFLDEPTSGLDSASAFSVIETLRQLAVDGGRTIVSSVHQPSSEVFA 248
Query: 231 EFNSILLMAEGNLLFHGTQDACKSFFESIDLHCPLNYNPAEFYIRAVS 278
F+ + L++ G ++ G FF CP NP++ ++R V+
Sbjct: 249 LFDDLCLLSSGECVYFGDAKLAPQFFAETGFPCPSRRNPSDHFLRCVN 296
>05_01_0147 - 981697-983739
Length = 680
Score = 109 bits (263), Expect = 2e-24
Identities = 73/246 (29%), Positives = 119/246 (48%), Gaps = 16/246 (6%)
Query: 46 AKPKTVIIDNAC--IREGEFAAIIGPSGAGKTTFLVSLAGKCTL-PFEGTVTING----- 97
A P ++D R+GE A++G SG+GK+T L +LAG+ G V +NG
Sbjct: 51 APPAKALLDGISGEARDGEVLAVMGASGSGKSTLLDALAGRIARGSLRGRVELNGEALHG 110
Query: 98 RNVRDLTGAEIVPQFDVFTDSLTVMEQLVFMTEMKLGNSTKQPNKSI-LNTVIEEFKLSA 156
R VR ++ V Q DV LTV E L+F E +L + K ++ +I + L+
Sbjct: 111 RRVRAISA--YVMQDDVLYPMLTVRETLMFAAEFRLPRALSPDKKRARVDALIGQLGLAR 168
Query: 157 HVETXXXXXXXXXXXXX-----XXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLS 211
+T T + +P +L DEPT+GLDS +A V+ +L++++
Sbjct: 169 AADTIVGDEAHRGVSGGERRRVSIGTDIVHDPILLFLDEPTSGLDSASAFMVVQVLRRIA 228
Query: 212 ASGKIVICSVHQPSCDIFKEFNSILLMAEGNLLFHGTQDACKSFFESIDLHCPLNYNPAE 271
SG +++ ++HQPS I + +LL++ G ++ G+ K FF P N N E
Sbjct: 229 QSGSVIVMTIHQPSARILNILDRLLLLSRGRTVYAGSPSGLKPFFSVFGYPIPDNENLVE 288
Query: 272 FYIRAV 277
F + +
Sbjct: 289 FALDTI 294
>03_02_0582 + 9624481-9626844
Length = 787
Score = 108 bits (259), Expect = 6e-24
Identities = 71/225 (31%), Positives = 109/225 (48%), Gaps = 12/225 (5%)
Query: 59 REGEFAAIIGPSGAGKTTFLVSLAGKCTLP-FEGTVTINGRNVRDLTGAEI---VPQFDV 114
R+GE A++G SG+GK+T + +LA + G+VTING ++ I V Q D+
Sbjct: 166 RDGEIMAVLGASGSGKSTLIDALANRIAKESLHGSVTINGESIDSNLLKVISAYVRQEDL 225
Query: 115 FTDSLTVMEQLVFMTEMKLGNS--TKQPNKSILNTVIEEFKLSAHVETXXXXXXXXXXXX 172
LTV E L+F E +L S T++ K + +I++ L T
Sbjct: 226 LYPMLTVEETLMFAAEFRLPRSLPTREKKKRV-KELIDQLGLKRAANTIIGDEGHRGVSG 284
Query: 173 X-----XXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCD 227
+ NP +L DEPT+GLDS +A V+ +LK ++ SG +V+ S+HQPS
Sbjct: 285 GERRRVSIGVDIIHNPIMLFLDEPTSGLDSTSAFMVVTVLKAIAQSGSVVVMSIHQPSYR 344
Query: 228 IFKEFNSILLMAEGNLLFHGTQDACKSFFESIDLHCPLNYNPAEF 272
I + +L ++ G +++G FF P N NP EF
Sbjct: 345 ILGLLDRLLFLSRGKTVYYGPPSELPPFFLDFGKPIPDNENPTEF 389
>01_06_1264 + 35854600-35856849
Length = 749
Score = 107 bits (256), Expect = 1e-23
Identities = 73/225 (32%), Positives = 113/225 (50%), Gaps = 12/225 (5%)
Query: 59 REGEFAAIIGPSGAGKTTFLVSLAGKCTLP-FEGTVTINGR----NVRDLTGAEIVPQFD 113
REGE A++G SG+GK+T + +LA + + +G+VT+NG NV A ++ Q D
Sbjct: 139 REGEILAVMGASGSGKSTLIDALANRISRDALKGSVTLNGEPLTGNVIKSISAYVM-QDD 197
Query: 114 VFTDSLTVMEQLVFMTEMKLGNSTKQPNKSI-LNTVIEEFKLSAHVETXXXXXXXXXXXX 172
+ LTV E L F E +L + K + +IE+ L A +T
Sbjct: 198 LLFPMLTVAETLSFAAEFRLPRALPAAKKRTRVLELIEQLGLRAAADTIIGDEGHRGVSG 257
Query: 173 X-----XXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCD 227
T + +P +L DEPT+GLDS +A V+ +L+ ++ SG IVI S+HQPS
Sbjct: 258 GERRRVSIGTDIIHDPILLFLDEPTSGLDSTSAFMVVQVLRNIAESGSIVITSIHQPSQR 317
Query: 228 IFKEFNSILLMAEGNLLFHGTQDACKSFFESIDLHCPLNYNPAEF 272
I + ++L++ G +F G A ++F P + N AEF
Sbjct: 318 ILGLLDRLILLSGGRTVFSGPPSAIPAYFAEFGYPVPDDENRAEF 362
>08_01_0442 + 3922402-3922707,3922940-3923816,3925741-3926831
Length = 757
Score = 105 bits (252), Expect = 5e-23
Identities = 79/251 (31%), Positives = 126/251 (50%), Gaps = 23/251 (9%)
Query: 45 VAKPKTVIID-NACIREGEFAAIIGPSGAGKTTFLVSLAGKC-------TLPFEGTVTIN 96
VAK KT+I + +R GE A++GPSG+GKTT L +L G+ G +T N
Sbjct: 142 VAKEKTIISGMSGVVRPGEMLAMLGPSGSGKTTLLTALGGRHGGGGGGGRGMLSGKITYN 201
Query: 97 GRN----VRDLTGAEIVPQFDVFTDSLTVMEQLVFMTEMKLGNSTKQPNKSI-LNTVIEE 151
G+ V+ TG V Q DV LTV E L + ++L + K V+ E
Sbjct: 202 GQPFSGAVKRRTG--FVTQHDVLYPHLTVAETLWYTALLRLPRALGAGEKRAQAEEVMLE 259
Query: 152 FKLS--AHVETXXXXXXXXXXXXXXXATSF----LSNPQILICDEPTTGLDSYNASQVIG 205
L AH S L +P +L+ DEPT+GLDS A++++G
Sbjct: 260 LGLGKVAHSMIGGVRGVRGLSGGERKRVSIGLEMLVDPSLLLLDEPTSGLDSTTAARIVG 319
Query: 206 ILKKLSA-SGKIVICSVHQPSCDIFKEFNSILLM-AEGNLLFHGTQDACKSFFESIDLHC 263
L++++A G+ V+ ++HQPS ++ F+ +LL+ ++G +++G S+F S+
Sbjct: 320 TLRRMAAGGGRTVVVTIHQPSSRLYHMFDKVLLLSSDGCPIYYGLAADALSYFASVGFAS 379
Query: 264 PLNYNPAEFYI 274
PL+ NPA+ +
Sbjct: 380 PLSLNPADLML 390
>09_04_0484 +
17990020-17990488,17990930-17991009,17991122-17991586,
17994670-17994756,17994887-17995018,17995102-17995293,
17995409-17995495,17995621-17996295
Length = 728
Score = 104 bits (250), Expect = 8e-23
Identities = 69/234 (29%), Positives = 110/234 (47%), Gaps = 10/234 (4%)
Query: 55 NACIREGEFAAIIGPSGAGKTTFLVSLAGKC--TLPFEGTVTINGRNVRDLTGAEI-VPQ 111
N R GE AI+GPSG GK+T L SLAG+ ++ +G + INGR + G V Q
Sbjct: 129 NGYARPGEVLAIMGPSGCGKSTLLDSLAGRLGSSVSQKGDILINGRRQKLAFGTSAYVTQ 188
Query: 112 FDVFTDSLTVMEQLVFMTEMKLGNSTKQPNK-SILNTVIEEFKLSAHVET-----XXXXX 165
DV ++LTV E + + +++L + K + E L +T
Sbjct: 189 DDVLMNTLTVREAVRYSAQLQLPSGMSAAAKRERAEETLREMGLEGAADTRIGGWAHKGI 248
Query: 166 XXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSA-SGKIVICSVHQP 224
L+ P +L DEPT+GLDS + V+ + +++ G V+ +VHQP
Sbjct: 249 SGGQRRRVSICMEILTRPALLFLDEPTSGLDSAASYHVVSRIARMARREGMTVVAAVHQP 308
Query: 225 SCDIFKEFNSILLMAEGNLLFHGTQDACKSFFESIDLHCPLNYNPAEFYIRAVS 278
S ++F F+ + L+A G +F G F CP NP++ ++R ++
Sbjct: 309 STEVFGLFHGLCLLAYGKTVFFGPAADTAQFSALSGFPCPSLMNPSDHFLRTIN 362
>03_02_0583 + 9635002-9637299
Length = 765
Score = 104 bits (250), Expect = 8e-23
Identities = 71/224 (31%), Positives = 108/224 (48%), Gaps = 10/224 (4%)
Query: 59 REGEFAAIIGPSGAGKTTFLVSLAGKCTLP-FEGTVTINGRNV--RDLTG-AEIVPQFDV 114
REGE A++G SGAGKTT + +LA + G VT+NG + R L + V Q D+
Sbjct: 140 REGEIMAVLGASGAGKTTLIDALADRIQRDSLRGAVTLNGEPLGGRMLKVISAYVMQDDL 199
Query: 115 FTDSLTVMEQLVFMTEMKLGNSTKQPNKSI-LNTVIEEFKLSAHVETXXXXXXXXXXXXX 173
LTV E L++ E +L S K+ + +I++ L A T
Sbjct: 200 LYPMLTVAETLMYSAEFRLPRSLSASKKATRVQELIDQLGLRAAANTIIGDEGRRGVSGG 259
Query: 174 -----XXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDI 228
+ +P IL DEPT+GLDS +A V+ +L+ ++ SG +VI S+HQPS I
Sbjct: 260 ERRRVSIGIDIIHDPIILFLDEPTSGLDSTSAFMVVKVLQGIAKSGSVVIMSIHQPSYRI 319
Query: 229 FKEFNSILLMAEGNLLFHGTQDACKSFFESIDLHCPLNYNPAEF 272
+ ++ ++ G +++G + FF P NP EF
Sbjct: 320 IGLIDRLMFLSRGRTVYYGPPASLPLFFSEFGHPIPDGQNPVEF 363
>09_02_0499 - 9917891-9918148,9918240-9918494,9918769-9918940,
9919056-9919283,9919628-9919761,9919842-9919925,
9920007-9920297,9920569-9920901,9921029-9921171,
9921266-9921379,9921470-9921626,9921709-9921812,
9921914-9922074,9922158-9922474,9922574-9922855,
9923205-9923506,9923603-9923693,9923864-9923917,
9924052-9924128,9924213-9924372,9924473-9924557,
9924635-9924723,9925791-9925925
Length = 1341
Score = 104 bits (249), Expect = 1e-22
Identities = 73/237 (30%), Positives = 121/237 (51%), Gaps = 17/237 (7%)
Query: 59 REGEFAAIIGPSGAGKTTFLVSLAGKCTLPF-EGTVTINGRNVRDLTGAEI---VPQFDV 114
R G A++G SGAGKTT + LAG+ T + EG +TI+G + T A + Q D+
Sbjct: 780 RPGVLTALMGVSGAGKTTLMDVLAGRKTSGYIEGNITISGYPKKQETFARVSGYCEQNDI 839
Query: 115 FTDSLTVMEQLVFMTEMKL-GNSTKQPNKSILNTVIEEFKLSAHVETXX-----XXXXXX 168
+ ++TV E L F ++L K ++ V+E +LS ++
Sbjct: 840 HSPNVTVYESLAFSAWLRLPAEIDSATRKMFIDEVMELVELSPLKDSLVGLPGVSGLSTE 899
Query: 169 XXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDI 228
A ++NP I+ DEPT+GLD+ A+ V+ ++ +G+ V+C++HQPS DI
Sbjct: 900 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAIRNTVDTGRTVVCTIHQPSIDI 959
Query: 229 FKEFNSILLMAE-GNLLFHGT--QDACK--SFFESIDLHCPL--NYNPAEFYIRAVS 278
F+ F+ + LM G ++ G Q +C+ +FESI+ + YNP+ + + S
Sbjct: 960 FESFDELFLMKRGGEEIYVGPVGQHSCELIRYFESIEGVSKIKHGYNPSTWMLEVTS 1016
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/88 (27%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 186 LICDEPTTGLDSYNASQVIGILKK-LSASGKIVICSVHQPSCDIFKEFNSILLMAEGNLL 244
L DE +TGLDS ++ +++ + G + ++ QP+ + ++ F+ I+L+++G ++
Sbjct: 241 LFMDEISTGLDSSTTYNIVDSIRQTIHIVGGTAVIALLQPAPETYELFDDIILLSDGQVV 300
Query: 245 FHGTQDACKSFFESIDLHCPLNYNPAEF 272
++G ++ FFES+ CP A+F
Sbjct: 301 YNGPREHVLEFFESVGFKCPERKGVADF 328
Score = 44.8 bits (101), Expect = 9e-05
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 47 KPKTVIIDNAC--IREGEFAAIIGPSGAGKTTFLVSLAGKCT--LPFEGTVTINGRNVRD 102
K K I+ N I+ ++GP GAGKTT L++LAG L G +T NG + +
Sbjct: 58 KQKISILHNVSGIIKPHRMTLLLGPPGAGKTTLLLALAGNVPSGLKVSGQITYNGHTMDE 117
Query: 103 L---TGAEIVPQFDVFTDSLTVMEQLVF 127
A V Q D+ LTV E + F
Sbjct: 118 FEPRRSAAYVSQHDLHMGELTVRETVNF 145
>08_02_1457 +
27260841-27260965,27261126-27261246,27263455-27263543,
27263776-27263860,27263970-27264074,27264446-27264527,
27264573-27264686,27265029-27265330,27265519-27266114,
27266216-27266376,27266489-27266592,27266697-27266856,
27266942-27267105,27267213-27267545,27267640-27267930,
27268276-27268359,27268430-27268563,27268665-27268892,
27268993-27269164,27269263-27269517,27269778-27270047
Length = 1324
Score = 102 bits (245), Expect = 3e-22
Identities = 75/246 (30%), Positives = 127/246 (51%), Gaps = 16/246 (6%)
Query: 30 NLKVWTPEEKSIWRKVAKPKTVIID-NACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLP 88
N V P+E + + K ++ D + R G A++G +GAGKTT L LAG+ T
Sbjct: 729 NYFVDMPKEMTKYGVTDKKLQLLQDVSGAFRPGVLTALMGITGAGKTTLLDVLAGRKTGG 788
Query: 89 F-EGTVTINGRNVRDLTGAEI---VPQFDVFTDSLTVMEQLVFMTEMKLGNSTKQPNKSI 144
+ EGTV I G + T + I Q D+ + +LTV E L F ++L ++ K +++
Sbjct: 789 YIEGTVKIAGYPKKQETFSRISGYCEQSDIHSPNLTVYESLQFSAWLRLPSNVKSHQRNM 848
Query: 145 -LNTVIEEFKLSAHVETXXXXXXXXXXXXX-----XXATSFLSNPQILICDEPTTGLDSY 198
++ V++ +L+ A +++P I+ DEPTTGLD+
Sbjct: 849 FIDEVMDLVELTGLKNAMVGLAGATGLSAEQRKRLTIAVELVASPSIIFMDEPTTGLDAR 908
Query: 199 NASQVIGILKKLSASGKIVICSVHQPSCDIFKEFNSILLMAE-GNLLFHGTQDACKS--- 254
A+ V+ ++K +G+ V+C++HQPS +IF+ F+ +LLM G L++ G+ S
Sbjct: 909 AAAIVMRTVRKTVDTGRTVVCTIHQPSIEIFESFDELLLMKRGGQLIYSGSLGPLSSNMI 968
Query: 255 -FFESI 259
+FE+I
Sbjct: 969 KYFEAI 974
Score = 74.5 bits (175), Expect = 1e-13
Identities = 60/243 (24%), Positives = 109/243 (44%), Gaps = 17/243 (6%)
Query: 47 KPKTVIID-NACIREGEFAAIIGPSGAGKTTFLVSLAGKC--TLPFEGTVTINGRNVRDL 103
KP +I + IR ++G G+GKTT L +LAGK +L +G VT NG V
Sbjct: 96 KPMKIINEATGTIRPSRMTLLLGAPGSGKTTLLKALAGKLDSSLKMKGKVTYNGEEVNSS 155
Query: 104 TGAEI---VPQFDVFTDSLTVME-QLVFMTEMKLGNSTKQPNKSILNTV----IEEFKLS 155
T + V Q+D+ +T+ + + T L + NK + ++ LS
Sbjct: 156 TPQYLHAYVSQYDLHHAEMTLSSLKKLICTGHNLWRRKQPYNKLYYQAIKIECMQILGLS 215
Query: 156 AHVETXXXXXXXXXXXXXXXATSFLSNPQI-----LICDEPTTGLDSYNASQVIGILKKL 210
+T + + + D+ +TGLDS +++ L+++
Sbjct: 216 ECADTLVGDEMRRGISGGQKKRATIGEMLVGLARCFFMDDISTGLDSSTTFEIMKFLQQM 275
Query: 211 SASGKI-VICSVHQPSCDIFKEFNSILLMAEGNLLFHGTQDACKSFFESIDLHCPLNYNP 269
+ + ++ S+ QP + + F+ I+L+ EG +++HG ++ FFE++ CP N
Sbjct: 276 AHLMDLTMVISLLQPPPETLELFDDIILLCEGQIVYHGPRENATDFFETMGFKCPSRKNV 335
Query: 270 AEF 272
A+F
Sbjct: 336 ADF 338
>09_02_0501 - 9955987-9956244,9956329-9956583,9956713-9956884,
9957000-9957227,9959102-9959235,9959319-9959402,
9959539-9959829,9960076-9960405,9960526-9960668,
9960970-9961126,9961210-9961313,9961423-9961583,
9961664-9961980,9962094-9962375,9962471-9962772,
9962848-9962938,9963262-9963338,9963428-9963587,
9963682-9963766,9963838-9963949,9964864-9964943,
9968644-9968981
Length = 1386
Score = 101 bits (243), Expect = 6e-22
Identities = 72/237 (30%), Positives = 120/237 (50%), Gaps = 17/237 (7%)
Query: 59 REGEFAAIIGPSGAGKTTFLVSLAGKCTLPF-EGTVTINGRNVRDLTGAEI---VPQFDV 114
R G A++G SGAGKTT L LAG+ T + EG +TI+G + T A + Q D+
Sbjct: 825 RPGVLTALMGVSGAGKTTLLDVLAGRKTSGYIEGNITISGYPKKQETFARVSGYCEQNDI 884
Query: 115 FTDSLTVMEQLVFMTEMKLGNSTKQPN-KSILNTVIEEFKLSAHVETXX-----XXXXXX 168
+ ++T+ E L+F ++L K I+ V+E +L +
Sbjct: 885 HSPNVTIYESLMFSAWLRLPTKIDSATRKMIIEEVMELVELYPLKDALVGLPGVSGLSIE 944
Query: 169 XXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDI 228
A ++NP I+ DEPT+GLD+ A+ V+ ++ +G+ V+C++HQPS DI
Sbjct: 945 QRKRLTIAVELVANPSIIFLDEPTSGLDARAAAIVMRAIRNTVDTGRTVVCTIHQPSIDI 1004
Query: 229 FKEFNSILLMAE-GNLLFHGT--QDACK--SFFESIDLHCPL--NYNPAEFYIRAVS 278
F+ F+ + LM G ++ G Q +C+ +FE+I+ + YNP+ + + S
Sbjct: 1005 FESFDELFLMKRGGEEIYVGPLGQHSCELIRYFEAIEGVSKIKHGYNPSTWMLEVTS 1061
Score = 72.5 bits (170), Expect = 4e-13
Identities = 62/253 (24%), Positives = 113/253 (44%), Gaps = 27/253 (10%)
Query: 47 KPKTVIIDNAC--IREGEFAAIIGPSGAGKTTFLVSLAGKC--TLPFEGTVTINGRNVRD 102
K K I+ N ++ ++GP G+GKT+ L++LAG T+ GT+T NG + +
Sbjct: 160 KQKISILHNVSGIVKPHRMTLLLGPPGSGKTSLLMALAGTLPSTVKVSGTITYNGHTMDE 219
Query: 103 LT---GAEIVPQFDVFTDSLTVMEQLVFMTE-----------MKLGNSTKQPN---KSIL 145
A V Q D+ LTV E + F + M+L K+ N +
Sbjct: 220 FVPQRSAAYVSQHDLHMAELTVRETVSFSAKCQGVGHHYDMLMELLRREKEENIKPDPEI 279
Query: 146 NTVIEEFKLSAHVETXXXXXXXXXXXXX-----XXATSFLSNPQILICDEPTTGLDSYNA 200
+ ++ L +T A ++ + L DE TGLDS
Sbjct: 280 DLYLKILGLDICADTIVGNNMVRGISGGQKKRLTTAEMLVTPGRALFMDEILTGLDSSTT 339
Query: 201 SQVIGILKK-LSASGKIVICSVHQPSCDIFKEFNSILLMAEGNLLFHGTQDACKSFFESI 259
Q++ +++ + G I ++ QP+ + ++ F+ I+++++G ++++G +D FF+SI
Sbjct: 340 FQIVNSIRQTVHILGGTTIIALLQPAPETYELFDEIIILSDGQVVYNGPRDHVLEFFQSI 399
Query: 260 DLHCPLNYNPAEF 272
CP A+F
Sbjct: 400 GFKCPERKGVADF 412
>09_04_0037 +
13992103-13992624,13993001-13993180,13993423-13993691,
13994120-13995773
Length = 874
Score = 101 bits (242), Expect = 7e-22
Identities = 69/231 (29%), Positives = 113/231 (48%), Gaps = 10/231 (4%)
Query: 61 GEFAAIIGPSGAGKTTFLVSLAGKCTL-PFEGTVTINGRNVRDLTGAEI---VPQFDVFT 116
G+ AI+GPSGAGK+TFL +LAG+ EG+V I+GR V +I V Q D
Sbjct: 135 GQVTAILGPSGAGKSTFLDALAGRIAKGSLEGSVRIDGRAVTTSYMKQISSYVMQDDQLF 194
Query: 117 DSLTVMEQLVFMTEMKLGNSTKQPNK-SILNTVIEEFKL--SAHV---ETXXXXXXXXXX 170
LTV+E L F E++L S + K + +I++ L +AH +
Sbjct: 195 PMLTVLETLTFAAEVRLPPSLSRAEKLKRVWELIDQLGLQTTAHTYIGDEGTRGVSGGER 254
Query: 171 XXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIFK 230
+ P +L DEPT+GLDS +A V+ +K ++ G IV+ ++HQPS I
Sbjct: 255 RRVSIGIDIIHKPSLLFLDEPTSGLDSTSAHSVVEKVKDIARGGSIVLMTIHQPSFRIQM 314
Query: 231 EFNSILLMAEGNLLFHGTQDACKSFFESIDLHCPLNYNPAEFYIRAVSNHN 281
+ ++++A G L++ G+ ++ P N E+ + + ++
Sbjct: 315 LLDRLVILARGRLIYLGSPSTLQTHLAGFGRPVPDGENSIEYLLDVIKEYD 365
>01_05_0117 - 18300157-18301106,18301149-18301543,18302592-18302681,
18303723-18303836,18303903-18304046,18316147-18316312,
18316396-18317130,18317219-18317422,18317496-18318177,
18318272-18318528,18318604-18319298,18319345-18319382,
18319847-18319928,18320018-18320112,18320443-18320526,
18320601-18320891,18321521-18321853,18321948-18322150,
18322243-18322399,18322482-18322585,18322675-18322835,
18323511-18323824,18324317-18324589,18324666-18324967,
18325459-18325549,18326140-18326190,18326700-18326768,
18326926-18327017,18327082-18327148,18328582-18328746,
18329027-18329103,18329572-18329766,18330208-18330275,
18331081-18331172,18331399-18331522,18331608-18331705,
18332384-18332997,18333620-18333626
Length = 2892
Score = 100 bits (239), Expect = 2e-21
Identities = 62/197 (31%), Positives = 104/197 (52%), Gaps = 10/197 (5%)
Query: 55 NACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPF-EGTVTINGRNVRDLTGAEIV---P 110
+ R G A++G SGAGKTT + LAG+ T + EGT+ I+G + T + +
Sbjct: 1127 SGAFRPGVLTALMGFSGAGKTTLMDVLAGRKTGGYTEGTINISGYPKKQETFSRVFGYCE 1186
Query: 111 QFDVFTDSLTVMEQLVFMTEMKLGNST-KQPNKSILNTVIEEFKLS----AHVETXXXXX 165
Q ++ + LTV+E L+F ++L + K + V+E +L+ AHV
Sbjct: 1187 QSNIHSPHLTVLESLLFSAWLRLPSEIDSMTRKMFVENVMELLELTSLQDAHVGLAEENG 1246
Query: 166 XXXXXXXXXX-ATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQP 224
A ++NP I+ DEPT+GLD+ A+ V+ ++ L +GK ++C++HQP
Sbjct: 1247 LSSEQRRRLTIAVELVANPSIIFMDEPTSGLDARGAAIVMRTVRNLVDTGKTIVCTIHQP 1306
Query: 225 SCDIFKEFNSILLMAEG 241
S DIF+ + + L+ +G
Sbjct: 1307 SIDIFESLDELFLLNQG 1323
Score = 62.5 bits (145), Expect = 4e-10
Identities = 29/94 (30%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 186 LICDEPTTGLDSYNASQVIGILKKL-SASGKIVICSVHQPSCDIFKEFNSILLMAEGNLL 244
L D+ +TGLDS A Q++ L+++ G+ + S+ QPS +++ F+ I+ ++EG+++
Sbjct: 614 LFMDDISTGLDSSTAFQIVNFLRQMVHILGETAVISLLQPSHEMYDLFDDIIFLSEGHIV 673
Query: 245 FHGTQDACKSFFESIDLHCPLNYNPAEFYIRAVS 278
+ G ++ FFES+ CP A+F + S
Sbjct: 674 YQGPKEKAVDFFESLGFICPHRKAIADFLLEVTS 707
>10_08_0173 +
15414628-15414890,15415001-15415074,15416322-15416401,
15417186-15417231,15417334-15417368,15417751-15417771,
15418418-15419133,15419292-15419324,15419517-15419813,
15420213-15420659,15420738-15420886,15421408-15421697,
15421774-15421898,15422006-15422156
Length = 908
Score = 99.5 bits (237), Expect = 3e-21
Identities = 79/258 (30%), Positives = 121/258 (46%), Gaps = 22/258 (8%)
Query: 39 KSIWRKVAKPKTVIIDNACIREGEFAAIIGPSGAGKTTFLVSLAGKCT-LPFEGTVTING 97
K + + K K + + G AI+GPSGAGKTTFL ++ GK T +G V ING
Sbjct: 315 KGLTLSIGKKKLLQCVTGKLSPGRVTAIMGPSGAGKTTFLNAVLGKTTGYKKDGLVLING 374
Query: 98 RNVRDLTGAEI---VPQFDVFTDSLTVMEQLVFMT----EMKLGN----STKQPNKS--- 143
++ + +I VPQ D+ +LTV E L F + N S+K +KS
Sbjct: 375 KSGSMQSYKKIIGFVPQDDIVHGNLTVEENLWFSACCSLKFSFANPHPWSSKGMSKSDKI 434
Query: 144 -ILNTVI-----EEFKLSAHVETXXXXXXXXXXXXXXXATSFLSNPQILICDEPTTGLDS 197
+L VI +E + S + P +LI DEPTTGLDS
Sbjct: 435 IVLERVIGSLGLQEIRNSLVGTVEKRGISGGQRKRVNVGIEMVMEPSLLILDEPTTGLDS 494
Query: 198 YNASQVIGILKKLSASGKIVICSVHQPSCDIFKEFNSILLMAEGNLL-FHGTQDACKSFF 256
++ ++ L+ + G V +HQPS +F F+ +L+A G L+ + G +++F
Sbjct: 495 ASSQLLLRALRHEALQGVNVCAVIHQPSYTLFNMFDDFVLLARGGLIAYLGPISEVETYF 554
Query: 257 ESIDLHCPLNYNPAEFYI 274
S+ + P NP ++YI
Sbjct: 555 SSLGIKVPERENPPDYYI 572
>01_05_0662 - 24103475-24103735,24103831-24104085,24104280-24104451,
24104535-24104762,24104864-24104997,24105101-24105184,
24105273-24105563,24105660-24105992,24106081-24106334,
24106435-24106591,24106674-24106777,24106879-24107039,
24107216-24107529,24107614-24107895,24107991-24108292,
24108367-24108457,24108566-24108619,24108785-24108861,
24108963-24109207,24109322-24109410,24110811-24111254
Length = 1443
Score = 98.7 bits (235), Expect = 5e-21
Identities = 73/238 (30%), Positives = 119/238 (50%), Gaps = 17/238 (7%)
Query: 59 REGEFAAIIGPSGAGKTTFLVSLAGKCTLPF-EGTVTINGRNVRDLTGAEI---VPQFDV 114
R G A++G SGAGKTT + LAG+ T + EG + I+G + T A I Q D+
Sbjct: 881 RPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGYPKKQETFARISGYCEQNDI 940
Query: 115 FTDSLTVMEQLVFMTEMKLGNST-KQPNKSILNTVIEEFKLSAHVETXX-----XXXXXX 168
+ +TV E LVF ++L + + K + V++ +L++
Sbjct: 941 HSPHVTVYESLVFSAWLRLPSEVDSEARKMFIEEVMDLVELTSLRGALVGLPGVSGLSTE 1000
Query: 169 XXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDI 228
A ++NP I+ DEPT+GLD+ A+ V+ ++ +G+ V+C++HQPS DI
Sbjct: 1001 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVNTGRTVVCTIHQPSIDI 1060
Query: 229 FKEFNSILLMAE-GNLLFHGT--QDACK--SFFESID--LHCPLNYNPAEFYIRAVSN 279
F+ F+ + LM G ++ G Q++ K +FE ID YNPA + + S+
Sbjct: 1061 FEAFDELFLMKRGGEEIYVGPVGQNSSKLIEYFEGIDGVSRIKDGYNPATWMLEVTSS 1118
Score = 55.6 bits (128), Expect = 5e-08
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 186 LICDEPTTGLDSYNASQVIGILKK-LSASGKIVICSVHQPSCDIFKEFNSILLMAEGNLL 244
L DE +TGLDS Q++ L++ + G + S+ QP+ + + F+ I+L+++G ++
Sbjct: 344 LFMDEISTGLDSSTTYQIVNSLRQTIHILGGTAVISLLQPAPETYNLFDDIILLSDGQVV 403
Query: 245 FHGTQDACKSFFESIDLHCPLNYNPAEF 272
+ G ++ FFE + CP A+F
Sbjct: 404 YQGPREHVLEFFEFMGFRCPARKGVADF 431
Score = 50.4 bits (115), Expect = 2e-06
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 47 KPKTVIID-NACIREGEFAAIIGPSGAGKTTFLVSLAGKC--TLPFEGTVTINGRNVRDL 103
+P TV+ D + I+ ++GP G+GKTT L++LAGK L G VT NG + +
Sbjct: 162 QPMTVLHDVSGIIKPRRMTLLLGPPGSGKTTLLLALAGKLDKDLKVSGKVTYNGHGMHEF 221
Query: 104 T---GAEIVPQFDVFTDSLTVMEQLVF 127
A + Q D+ +TV E L F
Sbjct: 222 VPERTAAYISQHDLHIGEMTVRETLAF 248
>01_05_0658 - 24043655-24043945,24044003-24044257,24044359-24044530,
24044617-24044844,24045688-24045821,24045908-24045991,
24046202-24046492,24046571-24046903,24047002-24047246,
24047476-24047742,24048305-24048465,24048556-24048872,
24048966-24049247,24049325-24049626,24049699-24049789,
24049881-24049934,24050028-24050104,24050192-24050367,
24051331-24051540,24051626-24052029
Length = 1457
Score = 98.7 bits (235), Expect = 5e-21
Identities = 71/242 (29%), Positives = 116/242 (47%), Gaps = 19/242 (7%)
Query: 55 NACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPF-EGTVTINGRNVRDLTGAEI---VP 110
+ C R G A++G SGAGKTT + LAG+ T + EG ++I+G + T A +
Sbjct: 881 SGCFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGNISISGYPKKQETFARVSGYCE 940
Query: 111 QFDVFTDSLTVMEQLVFMTEMKLGNST-KQPNKSILNTVIEEFKLSAHVETXXXX----- 164
Q D+ + +TV E L+F ++L K + V+E +L +
Sbjct: 941 QNDIHSPQVTVSESLLFSAWLRLPKDVDSNTRKMFIEEVMELVELKPLRDALVGLPGVNG 1000
Query: 165 XXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQP 224
A ++NP I+ DEPT+GLD+ A+ V+ ++ +G+ V+C++HQP
Sbjct: 1001 LSIEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVNTGRTVVCTIHQP 1060
Query: 225 SCDIFKEFNSILLMAEG------NLLFHGTQDACKSFFESIDLHCPL--NYNPAEFYIRA 276
S DIF+ F+ + LM G L H + + K +FE I + YNPA + +
Sbjct: 1061 SIDIFEAFDELFLMKRGGEEIYVGPLGHHSSELIK-YFEGIQGVSKITDGYNPATWMLEV 1119
Query: 277 VS 278
+
Sbjct: 1120 TT 1121
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/85 (29%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 189 DEPTTGLDSYNASQVIGILKK-LSASGKIVICSVHQPSCDIFKEFNSILLMAEGNLLFHG 247
DE +TGLDS Q++ L++ + G + S+ QP+ + + F+ I+L+++G++++ G
Sbjct: 351 DEISTGLDSSTTFQIVKSLRQTIHILGGTAVISLLQPAPETYDLFDDIILLSDGHIVYQG 410
Query: 248 TQDACKSFFESIDLHCPLNYNPAEF 272
++ FFE + CP A+F
Sbjct: 411 PRENVLEFFELMGFKCPERKGVADF 435
>01_01_0134 -
1224084-1224269,1224578-1224662,1224763-1225050,
1225114-1225334,1225511-1225642,1226218-1226494,
1226722-1226770,1226993-1227088,1227779-1227911,
1228241-1228391,1228484-1228674,1229167-1229382
Length = 674
Score = 98.3 bits (234), Expect = 7e-21
Identities = 77/232 (33%), Positives = 112/232 (48%), Gaps = 31/232 (13%)
Query: 59 REGEFAAIIGPSGAGKTTFLVSLAGKCT----LPFEGTVTINGRNVRDLTGAEI--VPQF 112
+ G A++GPSG+GKTT L LAG+ T L G + INGR + + G +I V Q
Sbjct: 85 KSGRLLALMGPSGSGKTTLLNVLAGQLTASPSLHLSGFLYINGRPISE-GGYKIAYVRQE 143
Query: 113 DVFTDSLTVMEQLVFMTEMKLGNS-TKQPNKSILNTVIEEFKL-----SAHVETXXXXXX 166
D+F LTV E L E++L + T + +S +N ++ L S +
Sbjct: 144 DLFFSQLTVRETLSLAAELQLRRTLTPERKESYVNDLLFRLGLVNCADSIVGDAKVRGIS 203
Query: 167 XXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSC 226
A +++P I+ DEPTTGLD++ A +V+ L++L+ G VICS+HQP
Sbjct: 204 GGEKKRLSLACELIASPSIIFADEPTTGLDAFQAEKVMETLRQLAEDGHTVICSIHQPRV 263
Query: 227 DIFKEFNSILLMAEGNLLFHGTQDACKSFFESIDLHCPLNYNPAEFYIRAVS 278
IF +L GT S+ HCP + NPAEF +S
Sbjct: 264 VIF-------------VLVSGTIQN-----SSVRYHCPDHVNPAEFLADLIS 297
>09_02_0504 - 10013784-10014041,10014558-10014660,10014932-10015093,
10015416-10015549,10015633-10015716,10015839-10016129,
10016362-10016694,10016823-10016965,10017273-10017429,
10017513-10017616,10017728-10017888,10017971-10018287,
10018396-10018677,10018759-10019226,10019338-10019391,
10019689-10019742,10019943-10020021,10020108-10020196,
10021153-10021273,10022321-10022637
Length = 1236
Score = 97.5 bits (232), Expect = 1e-20
Identities = 69/237 (29%), Positives = 122/237 (51%), Gaps = 17/237 (7%)
Query: 59 REGEFAAIIGPSGAGKTTFLVSLAGKCTLPF-EGTVTINGRNVRDLTGAEI---VPQFDV 114
R+G A++G SGAGKTT L LAG+ T + +G++TI+G + T A I Q D+
Sbjct: 805 RQGVLTALMGVSGAGKTTLLDVLAGRKTSGYVQGSITISGYPKKQETFARISGYCEQNDI 864
Query: 115 FTDSLTVMEQLVFMTEMKLG-NSTKQPNKSILNTVIEEFKLSAHVETXX-----XXXXXX 168
+ ++TV E L+F ++L K + V+E ++ + +
Sbjct: 865 HSPNVTVYESLMFSAWLRLPVEIDSATRKMFVYEVMELVEILSLKDALVGLPGVSGLSSE 924
Query: 169 XXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDI 228
A ++NP I+ DEPT+GLD+ A+ V+ ++ +G+ V+C++HQPS +I
Sbjct: 925 RRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAIRNTVDTGRTVVCTIHQPSIEI 984
Query: 229 FKEFNSILLMAE-GNLLFHGT--QDACK--SFFESIDLHCPL--NYNPAEFYIRAVS 278
F+ F+ + LM + G ++ G + +C+ +FE+I + YNP+ + + S
Sbjct: 985 FESFDELFLMKQGGEEIYVGPIGRQSCELIKYFEAIQGVSKIKDGYNPSTWMLEVTS 1041
Score = 72.1 bits (169), Expect = 5e-13
Identities = 57/226 (25%), Positives = 105/226 (46%), Gaps = 17/226 (7%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDL-------TG---AE 107
I+ ++GP G+GKT+ L++LAG TL F G +I+ ++V+ L TG AE
Sbjct: 172 IKPHRMTLLLGPPGSGKTSLLLALAGTSTLKF-GRQSISLQSVKGLAIIMAATTGEQKAE 230
Query: 108 IVPQFDVFTDSLTVMEQLVFMTEMKLGNSTKQPNKSILNTVIEEFKLSAHVETXXXXXXX 167
+V + L + + M G S Q + V E +E
Sbjct: 231 VVTNHILKILGLDICADTIVGNNMLRGISGGQKKRLTTGNVSLEL-----LECMMVTISD 285
Query: 168 XXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKK-LSASGKIVICSVHQPSC 226
A ++ + L DE +TGLDS Q++ +++ + G + ++ QP+
Sbjct: 286 PLPNIDATAEMIVTPGRALFMDEISTGLDSSTTFQIVNTIRQTIRILGGTAVIALLQPAP 345
Query: 227 DIFKEFNSILLMAEGNLLFHGTQDACKSFFESIDLHCPLNYNPAEF 272
+ ++ F+ I+L+++G ++++G +D FF+S+ CP A+F
Sbjct: 346 ETYELFDDIILLSDGQVVYNGPRDHVLEFFKSVGFKCPERKCVADF 391
>01_05_0660 - 24071523-24071780,24071873-24072127,24072209-24072380,
24072458-24072685,24072785-24072918,24073005-24073088,
24073231-24073521,24073599-24073931,24074016-24074266,
24074354-24074620,24074707-24074867,24074978-24075294,
24075386-24075667,24075753-24076054,24076147-24076237,
24076326-24076379,24076497-24076573,24076700-24076859,
24077129-24077213,24077421-24077630,24077736-24078097
Length = 1457
Score = 97.1 bits (231), Expect = 2e-20
Identities = 71/238 (29%), Positives = 116/238 (48%), Gaps = 19/238 (7%)
Query: 59 REGEFAAIIGPSGAGKTTFLVSLAGKCTLPF-EGTVTINGRNVRDLTGAEI---VPQFDV 114
R G A++G SGAGKTT + LAG+ T + EG++ I+G + T A + Q D+
Sbjct: 896 RPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGSINISGYPKKQETFARVSGYCEQNDI 955
Query: 115 FTDSLTVMEQLVFMTEMKLGNST-KQPNKSILNTVIEEFKLSAHVETXXXX-----XXXX 168
+ +TV E L+F ++L K + V+E +L + +
Sbjct: 956 HSPQVTVYESLLFSAWLRLPEDVDSNTRKMFIEEVMELVELKSLRDALVGLPGVNGLSTE 1015
Query: 169 XXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDI 228
A ++NP I+ DEPT+GLD+ A+ V+ ++ +G+ V+C++HQPS DI
Sbjct: 1016 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVNTGRTVVCTIHQPSIDI 1075
Query: 229 FKEFNSILLMAEG------NLLFHGTQDACKSFFESIDLHCPL--NYNPAEFYIRAVS 278
F+ F+ + LM G L H + + K +FESI + YNPA + + +
Sbjct: 1076 FEAFDELFLMKRGGEEIYAGPLGHHSSELIK-YFESIPGVSKIKDGYNPATWMLEVTT 1132
Score = 56.4 bits (130), Expect = 3e-08
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 186 LICDEPTTGLDSYNASQVIGILKK-LSASGKIVICSVHQPSCDIFKEFNSILLMAEGNLL 244
L DE +TGLDS Q++ L++ + G + S+ QP+ + + F+ I+L+++G ++
Sbjct: 357 LFMDEISTGLDSSTTFQIVNSLRQTVHILGGTAVISLLQPAPETYNLFDDIILLSDGQIV 416
Query: 245 FHGTQDACKSFFESIDLHCPLNYNPAEF 272
+ G ++ FFES+ CP A+F
Sbjct: 417 YQGPREDVLEFFESMGFKCPDRKGVADF 444
Score = 44.8 bits (101), Expect = 9e-05
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKC--TLPFEGTVTINGRNVRDLT---GAEIVPQF 112
I+ ++GP G+GKTT L++LAG+ L G VT NG + + A + Q
Sbjct: 187 IKPRRMTLLLGPPGSGKTTLLLALAGRLGKDLKASGKVTYNGHGMEEFVPERTAAYISQH 246
Query: 113 DVFTDSLTVMEQLVF 127
D+ +TV E L F
Sbjct: 247 DLHIGEMTVRETLAF 261
>01_06_0556 + 30207124-30207581,30207692-30207901,30208016-30208100,
30208517-30208676,30208768-30208844,30208985-30209032,
30209504-30209594,30209703-30210004,30210214-30210495,
30210695-30211011,30211113-30211273,30211556-30211665,
30211752-30211902,30212438-30212578,30212688-30212857,
30213485-30213817,30213981-30214271,30214356-30214439,
30214620-30214753,30214946-30215173,30215273-30215444,
30215621-30215875,30215963-30216232
Length = 1509
Score = 96.7 bits (230), Expect = 2e-20
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 10/202 (4%)
Query: 55 NACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPF-EGTVTINGRNVRDLTGAEI---VP 110
+ R G A++G SGAGKTT + L+G+ T + EG + I+G T A I
Sbjct: 940 SGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYIEGEIYISGYPKNQATFARISGYCE 999
Query: 111 QFDVFTDSLTVMEQLVFMTEMKLGNSTKQPNKSI-LNTVIEEFKLSAHVETXXXX----- 164
Q D+ + +TV E L+F ++L K I ++ V+E +L+ +
Sbjct: 1000 QNDIHSPQITVRESLLFSAFLRLPKEVNDQEKKIFVDEVMELVELTGLKDAIVGLPGVNG 1059
Query: 165 XXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQP 224
A ++NP I+ DEPT+GLD+ A+ V+ ++ +G+ V+C++HQP
Sbjct: 1060 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVNTGRTVVCTIHQP 1119
Query: 225 SCDIFKEFNSILLMAEGNLLFH 246
S DIF+ F+ +LL+ G + +
Sbjct: 1120 SIDIFEAFDELLLLKRGGQVIY 1141
Score = 61.7 bits (143), Expect = 7e-10
Identities = 29/90 (32%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 184 QILICDEPTTGLDSYNASQVIGILKKLSASGKI-VICSVHQPSCDIFKEFNSILLMAEGN 242
++L DE +TGLDS Q+I ++++ G+ V+ S+ QP+ +IF+ F+ ++L++EG
Sbjct: 385 KVLFMDEISTGLDSSTTFQIIRCIQQIVHMGEATVLVSLLQPAPEIFELFDDVMLLSEGQ 444
Query: 243 LLFHGTQDACKSFFESIDLHCPLNYNPAEF 272
+++ G ++ FFE CP A+F
Sbjct: 445 IVYQGPREHVLEFFERCGFRCPERKGVADF 474
Score = 46.4 bits (105), Expect = 3e-05
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKC--TLPFEGTVTINGRNVRDLT---GAEIVPQF 112
+R ++GP +GKTT L++LAGK TL G VT NG + + A + Q
Sbjct: 219 VRPSRMTLLLGPPSSGKTTLLLALAGKLDPTLETSGEVTYNGYGLDEFVPQKTAAYISQH 278
Query: 113 DVFTDSLTVMEQLVF 127
DV +TV E L F
Sbjct: 279 DVHAGEMTVKETLDF 293
>01_05_0659 - 24061318-24061575,24061664-24061918,24062001-24062172,
24062258-24062381,24062442-24062485,24063601-24063734,
24063822-24063905,24064100-24064390,24064713-24065045,
24065145-24065389,24065644-24065910,24065997-24066157,
24066253-24066569,24066665-24066946,24067024-24067325,
24067398-24067488,24067796-24067849,24067963-24068039,
24068159-24068318,24068653-24068737,24069029-24069238,
24069344-24069732
Length = 1444
Score = 95.9 bits (228), Expect = 4e-20
Identities = 61/193 (31%), Positives = 97/193 (50%), Gaps = 10/193 (5%)
Query: 59 REGEFAAIIGPSGAGKTTFLVSLAGKCTLPF-EGTVTINGRNVRDLTGAEI---VPQFDV 114
R G A++G SGAGKTT + LAG+ T + EG +TI+G + T A + Q D+
Sbjct: 903 RPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGNITISGYPKKQETFARVSGYCEQNDI 962
Query: 115 FTDSLTVMEQLVFMTEMKLGNST-KQPNKSILNTVIEEFKLSAHVETXXXX-----XXXX 168
+ +TV E L+F ++L K + V+E +L +
Sbjct: 963 HSPQVTVSESLLFSAWLRLPKDVDSNTRKMFIEEVMELVELKPLRDALVGLPGVNGLSTE 1022
Query: 169 XXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDI 228
A ++NP I+ DEPT+GLD+ A+ V+ ++ +G+ V+C++HQPS DI
Sbjct: 1023 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDI 1082
Query: 229 FKEFNSILLMAEG 241
F+ F+ + LM G
Sbjct: 1083 FEAFDELFLMKRG 1095
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 186 LICDEPTTGLDSYNASQVIGILKK-LSASGKIVICSVHQPSCDIFKEFNSILLMAEGNLL 244
L DE +TGLDS Q++ L++ + G + S+ QP+ + + F+ I+L+++G ++
Sbjct: 366 LFMDEISTGLDSSTTFQIVKSLRQAIHILGGTAVISLLQPAPETYDLFDDIILLSDGQIV 425
Query: 245 FHGTQDACKSFFESIDLHCPLNYNPAEF 272
+ G ++ FFE + CP A+F
Sbjct: 426 YQGPREGVLEFFELMGFKCPERKGVADF 453
Score = 47.6 bits (108), Expect = 1e-05
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKC--TLPFEGTVTINGRNVRDLT---GAEIVPQF 112
++ ++GP G+GKTT L++LAG+ + F G VT NG + D A + Q
Sbjct: 196 VKPRRMTLLLGPPGSGKTTLLLALAGRLGKDIKFSGQVTYNGHQMEDFVPQRTAAYISQH 255
Query: 113 DVFTDSLTVMEQLVF 127
D+ +TV E L F
Sbjct: 256 DLHIGEMTVRETLSF 270
>12_01_0833 -
7730761-7731030,7731171-7731425,7731565-7731736,
7731873-7732106,7732362-7732495,7734116-7734199,
7735086-7735376,7735566-7735898,7736351-7736424,
7736558-7736653,7736876-7737029,7737118-7737221,
7737325-7737485,7737774-7738087,7738950-7739231,
7739909-7740210,7740513-7740713,7740924-7741014,
7741424-7741500,7741595-7741754,7742026-7742110,
7742194-7742288
Length = 1322
Score = 95.5 bits (227), Expect = 5e-20
Identities = 73/235 (31%), Positives = 120/235 (51%), Gaps = 17/235 (7%)
Query: 61 GEFAAIIGPSGAGKTTFLVSLAGKCTLP-FEGTVTINGRNVRDLTGAEI---VPQFDVFT 116
G +A++G +GAGKTT L LAG+ T EG + I G T + I Q DV +
Sbjct: 757 GILSALMGVTGAGKTTLLDVLAGRKTGGVIEGDIRIGGYPKVQQTFSRISGYCEQNDVHS 816
Query: 117 DSLTVMEQLVFMTEMKL-GNSTKQPNKSILNTVIEEFKLS----AHVET-XXXXXXXXXX 170
+TV E + + ++L + K ++ V+E +L A V T
Sbjct: 817 PQITVGESVAYSAWLRLPAEIDTKTRKEFVDEVLEIIELDEIRDALVGTPGVNGLSREQR 876
Query: 171 XXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIFK 230
A +SNP I+ DEPT+GLD+ A+ + +K ++ +G+ V+C++HQPS +IF+
Sbjct: 877 KRLTIAVELVSNPSIVFMDEPTSGLDARAAAIAMRAVKNVAETGRTVVCTIHQPSIEIFE 936
Query: 231 EFNSILLMAE-GNLLFHGT--QDACK--SFFESIDLHCPL--NYNPAEFYIRAVS 278
F+ ++L+ G L++ G Q +CK +F+SI + NYNP+ + + S
Sbjct: 937 AFDELMLIKRGGELIYAGPLGQHSCKVIQYFQSIPGVPKIKDNYNPSTWMLEVTS 991
Score = 68.9 bits (161), Expect = 5e-12
Identities = 32/96 (33%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Query: 184 QILICDEPTTGLDSYNASQVIGILKKLS-ASGKIVICSVHQPSCDIFKEFNSILLMAEGN 242
++L+ DE +TGLDS Q++ L++L+ S ++ S+ QP+ + + F+ I++M EG
Sbjct: 245 KVLLMDEISTGLDSSTTFQIVSCLQQLAHISEYTILVSLLQPAPETYDLFDDIIIMGEGK 304
Query: 243 LLFHGTQDACKSFFESIDLHCPLNYNPAEFYIRAVS 278
+++HG ++ +FFES CP PA+F +S
Sbjct: 305 VVYHGPKNLIMTFFESCGFKCPERKGPADFLQEVLS 340
Score = 43.2 bits (97), Expect = 3e-04
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 49 KTVIIDNAC--IREGEFAAIIGPSGAGKTTFLVSLAGKC--TLPFEGTVTINGRNVRDLT 104
K I++N I+ ++GP G GKTT L +LAG+ +L G + NG + +
Sbjct: 17 KVQILENVSGIIKPSRITLLLGPPGCGKTTLLKALAGRLNKSLKETGEIEYNGVKLDEFV 76
Query: 105 GAE---IVPQFDVFTDSLTVMEQLVFMTEMKLGNSTKQPNKSIL 145
A+ V Q+D+ +TV E L F + S + K+++
Sbjct: 77 PAKTSAYVSQYDLHVADMTVRETLDFSARFQGVGSRAEIMKAVI 120
>01_03_0179 + 13500413-13500768,13502522-13502642,13502876-13502998,
13504409-13504497,13504612-13504696,13504852-13505011,
13505096-13505160,13505296-13505349,13505437-13505527,
13505685-13505986,13506084-13506365,13506451-13506764,
13506920-13507080,13507202-13507305,13507379-13507535,
13507652-13507896,13507995-13508327,13508428-13508751,
13508816-13508899,13509001-13509169,13509610-13509731,
13510538-13510792,13511115-13511252
Length = 1377
Score = 95.5 bits (227), Expect = 5e-20
Identities = 62/187 (33%), Positives = 98/187 (52%), Gaps = 10/187 (5%)
Query: 59 REGEFAAIIGPSGAGKTTFLVSLAGKCTLPF-EGTVTINGRNVRDLTGAEI---VPQFDV 114
R G A++G SGAGKTT + LAG+ T + EG +TI+G + T A I Q D+
Sbjct: 926 RPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDITISGYPKKQETFARISGYCEQNDI 985
Query: 115 FTDSLTVMEQLVFMTEMKLGNST-KQPNKSILNTVIEEFKLSAHVETXXXX-----XXXX 168
+ +TV E LVF M+L + + K + V+E +L++
Sbjct: 986 HSPHVTVYESLVFSAWMRLPSEVDSETRKMFIEEVMELVELTSLRGALVGLPGVNGLSTE 1045
Query: 169 XXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDI 228
A ++NP I+ DEPT+GLD+ A+ V+ ++K +G+ V+C++HQPS DI
Sbjct: 1046 QRKRLTVAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRKTVDTGRTVVCTIHQPSIDI 1105
Query: 229 FKEFNSI 235
F+ F+ +
Sbjct: 1106 FEAFDEV 1112
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 186 LICDEPTTGLDSYNASQVIGIL-KKLSASGKIVICSVHQPSCDIFKEFNSILLMAEGNLL 244
L DE +TGLDS Q++ + + + G + S+ QP+ + + F+ I+L+++G ++
Sbjct: 392 LFMDEISTGLDSSTTYQIVNSIGQTIRILGGTAVISLLQPAPETYNLFDDIILLSDGQIV 451
Query: 245 FHGTQDACKSFFESIDLHCPLNYNPAEF 272
+ G ++ FFE + CP A+F
Sbjct: 452 YQGAREHVLEFFELMGFRCPQRKGVADF 479
Score = 50.0 bits (114), Expect = 2e-06
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 47 KPKTVIID-NACIREGEFAAIIGPSGAGKTTFLVSLAGKC--TLPFEGTVTINGRNVRDL 103
+P TV+ D + I+ ++GP G+GKTT L++LAGK L G VT NG + +
Sbjct: 214 QPMTVLHDVSGIIKPRRMTLLLGPPGSGKTTLLLALAGKLEDNLKVSGKVTYNGHGMDEF 273
Query: 104 T---GAEIVPQFDVFTDSLTVMEQLVF 127
A + Q D+ +TV E L F
Sbjct: 274 VPQRTAAYISQHDLHIGEMTVRETLAF 300
>08_02_0520 - 18121561-18121821,18122216-18122470,18122560-18122731,
18122824-18123105,18123159-18123292,18123425-18123508,
18123611-18123901,18123982-18124314,18124620-18124750,
18124826-18124930,18125011-18125167,18125248-18125351,
18125442-18125602,18125800-18126116,18126369-18126650,
18127011-18127312,18127609-18127699,18127771-18127824,
18128110-18128186,18128279-18128438,18128545-18128629,
18129059-18129367,18129514-18129890
Length = 1507
Score = 94.3 bits (224), Expect = 1e-19
Identities = 59/193 (30%), Positives = 100/193 (51%), Gaps = 10/193 (5%)
Query: 59 REGEFAAIIGPSGAGKTTFLVSLAGKCTLPF-EGTVTINGRNVRDLTGAEI---VPQFDV 114
R G A++G SGAGKTT + LAG+ T + EG ++I+G + T A + Q D+
Sbjct: 927 RPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDISISGYPKKQETFARVSGYCEQNDI 986
Query: 115 FTDSLTVMEQLVFMTEMKLGNST-KQPNKSILNTVIEEFKLSAHVETXXXX-----XXXX 168
+ ++TV E L + ++L + + K + V+E +L+ +
Sbjct: 987 HSPNVTVYESLAYSAWLRLPSDVDSETRKMFIEQVMELVELNPLRDALVGLPGVNGLSTE 1046
Query: 169 XXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDI 228
A ++NP I+ DEPT+GLD+ A+ V+ ++ +G+ V+C++HQPS DI
Sbjct: 1047 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDI 1106
Query: 229 FKEFNSILLMAEG 241
F+ F+ + LM G
Sbjct: 1107 FEAFDELFLMKRG 1119
Score = 56.0 bits (129), Expect = 4e-08
Identities = 27/88 (30%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 186 LICDEPTTGLDSYNASQVIGILKKL-SASGKIVICSVHQPSCDIFKEFNSILLMAEGNLL 244
+ DE +TGLDS Q++ L ++ S G + S+ QP+ + + F+ I+L+++G+++
Sbjct: 395 MFMDEISTGLDSSTTFQIVKSLGQITSILGGTTVISLLQPAPETYNLFDDIILLSDGHIV 454
Query: 245 FHGTQDACKSFFESIDLHCPLNYNPAEF 272
+ G ++ FFES+ CP A+F
Sbjct: 455 YQGPREHVLEFFESMGFKCPDRKGVADF 482
Score = 47.2 bits (107), Expect = 2e-05
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 47 KPKTVIID-NACIREGEFAAIIGPSGAGKTTFLVSLAGK--CTLPFEGTVTINGRNVRDL 103
+P ++ D + I+ ++GP G+GKTT L++LAGK L G VT NG + +
Sbjct: 213 RPLNILHDVHGVIKPRRMTLLLGPPGSGKTTLLLALAGKLGSDLKVSGKVTYNGYGMDEF 272
Query: 104 T---GAEIVPQFDVFTDSLTVMEQLVF 127
A + Q D+ +TV E L F
Sbjct: 273 VAQRSAAYISQHDLHIPEMTVRETLAF 299
>02_02_0009 + 6068260-6068591,6068797-6068917,6069034-6069122,
6069207-6069291,6069421-6069580,6069667-6069743,
6069848-6069898,6069979-6070069,6070167-6070468,
6070549-6070830,6070911-6071388,6071457-6071560,
6071647-6071809,6071895-6072017,6072099-6072217,
6072304-6072636,6072713-6073003,6073088-6073171,
6073260-6073393,6073478-6073705,6073795-6073966,
6074062-6074316,6074408-6074668
Length = 1444
Score = 93.9 bits (223), Expect = 1e-19
Identities = 60/197 (30%), Positives = 101/197 (51%), Gaps = 10/197 (5%)
Query: 55 NACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPF-EGTVTINGRNVRDLTGAEIV---P 110
+ R G A++G SGAGKTT + LAG+ T + EG ++I+G + T A I
Sbjct: 878 SGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDISISGYPKKQETFARIAGYCE 937
Query: 111 QFDVFTDSLTVMEQLVFMTEMKLGNST-KQPNKSILNTVIEEFKLSAHVETXXXX----- 164
Q D+ + +TV E L++ ++L + + K + V+E +L++
Sbjct: 938 QNDIHSPHVTVYESLLYSAWLRLPSEVDSEARKMFVEEVMELVELTSLRGALVGLPGVNG 997
Query: 165 XXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQP 224
A ++NP I+ DEPT+GLD+ A+ V+ ++ +G+ V+C++HQP
Sbjct: 998 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQP 1057
Query: 225 SCDIFKEFNSILLMAEG 241
S DIF+ F+ + LM G
Sbjct: 1058 SIDIFEAFDELFLMKRG 1074
Score = 54.4 bits (125), Expect = 1e-07
Identities = 26/88 (29%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 186 LICDEPTTGLDSYNASQVIGILKK-LSASGKIVICSVHQPSCDIFKEFNSILLMAEGNLL 244
L DE +TGLDS Q++ L++ + G + ++ QP+ + + F+ I+L++EG ++
Sbjct: 346 LFMDEISTGLDSSTTYQIVNSLRQSVHILGGTALIALLQPAPETYDLFDDIVLLSEGQIV 405
Query: 245 FHGTQDACKSFFESIDLHCPLNYNPAEF 272
+ G ++ FFE++ CP A+F
Sbjct: 406 YQGPRENILEFFEAMGFKCPERKGVADF 433
Score = 51.6 bits (118), Expect = 8e-07
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 47 KPKTVIID-NACIREGEFAAIIGPSGAGKTTFLVSLAGK--CTLPFEGTVTINGRNVRDL 103
+P +++ D + IR G + ++GP G+GKT+ L++LAGK TL G VT NG ++ +
Sbjct: 165 RPISILHDISGIIRPGRMSLLLGPPGSGKTSLLLALAGKLDSTLKVSGRVTYNGHDMDEF 224
Query: 104 T---GAEIVPQFDVFTDSLTVMEQLVF 127
+ + Q D+ +TV E L F
Sbjct: 225 VPQRTSAYIGQHDLHIGEMTVRETLAF 251
>01_05_0703 - 24404580-24406373
Length = 597
Score = 93.9 bits (223), Expect = 1e-19
Identities = 64/228 (28%), Positives = 107/228 (46%), Gaps = 9/228 (3%)
Query: 61 GEFAAIIGPSGAGKTTFLVSLAGKC--TLPFEGTVTINGRNVRDLTGAEI---VPQFDVF 115
GE AI+GPSGAGKTT L LAG G V +NGR + + VPQ D
Sbjct: 62 GEVVAIVGPSGAGKTTLLSVLAGSADPARVVAGEVLVNGRAMDAARFRRVSGHVPQDDAL 121
Query: 116 TDSLTVMEQLVFMTEMKL---GNSTKQPNKSILNTVIEEFKLSAHVETXXXXXXXXXXXX 172
LTV E LV+ ++L G + ++ E L +
Sbjct: 122 FPMLTVEESLVYSARLRLRGAGGGNGGAAVARARELMAELGLRHVAGSRVGRVSGGERRR 181
Query: 173 XXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSAS-GKIVICSVHQPSCDIFKE 231
+ +P +L+ DEPT+GLDS +A ++ +L+ ++A+ GK V+ ++HQP I +
Sbjct: 182 VSIGVDLVHDPAVLLLDEPTSGLDSGSALHIVKMLRDMAAAHGKTVVLTIHQPGFRILEL 241
Query: 232 FNSILLMAEGNLLFHGTQDACKSFFESIDLHCPLNYNPAEFYIRAVSN 279
+ ++L+A+G + HG+ ++ + P + N E+ + + +
Sbjct: 242 LDRVVLLADGAVRHHGSLGFLEARLAASGHGIPPHVNVLEYAMECIDS 289
>07_01_0663 + 4975950-4977688,4978183-4978528
Length = 694
Score = 92.3 bits (219), Expect = 5e-19
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 9/197 (4%)
Query: 60 EGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRD---LTGAEIVPQFDVFT 116
+G A++GPSGAGK+T L +LAG+ G V ++G V + V Q D
Sbjct: 62 KGCVTAVMGPSGAGKSTLLDALAGRIAARLGGRVALDGVEVSPGLVKRCSAYVMQDDRLF 121
Query: 117 DSLTVMEQLVFMTEMKLGNSTKQPNKSI-LNTVIEEFKLSAHVETXXXXXXXXXXXXX-- 173
LTV E L+F +++LG S +K ++ +I++ L+A T
Sbjct: 122 PMLTVRETLMFAADLRLGASVPAADKRRRVDALIDQLGLAASGNTYIGDEGTRGVSGGER 181
Query: 174 ---XXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIFK 230
+ P +L DEPT+GLDS +A V+ ++ ++ +G V+ ++HQPS I +
Sbjct: 182 RRVSIGVDIIHGPALLFLDEPTSGLDSTSAHSVVEKVRDIACAGSTVVLTIHQPSSRILQ 241
Query: 231 EFNSILLMAEGNLLFHG 247
+ ++++A G L++ G
Sbjct: 242 LLDHLVILARGQLMYSG 258
>02_04_0067 - 19425019-19425288,19425393-19425647,19425766-19425937,
19426069-19426302,19426523-19426656,19427663-19427746,
19428355-19428645,19428788-19429120,19429317-19429390,
19429464-19429644,19429993-19430096,19430232-19430392,
19430727-19431040,19431583-19431864,19432431-19432732,
19433176-19433266,19433368-19433421,19438917-19438993,
19439081-19439240,19439410-19439494,19439574-19440130
Length = 1404
Score = 92.3 bits (219), Expect = 5e-19
Identities = 67/231 (29%), Positives = 116/231 (50%), Gaps = 17/231 (7%)
Query: 61 GEFAAIIGPSGAGKTTFLVSLAGKCTLP-FEGTVTINGRNVRDLTGAEI---VPQFDVFT 116
G +A++G +GAGKTT L LAG+ T EG + + G T A I Q DV +
Sbjct: 839 GVLSALMGVTGAGKTTLLDVLAGRKTGGVIEGDIRVGGYPKIQQTFARISGYCEQTDVHS 898
Query: 117 DSLTVMEQLVFMTEMKLGNST-KQPNKSILNTVIEEFKLSAHVETXX-----XXXXXXXX 170
+TV E + + ++L + + ++ VI+ +L +
Sbjct: 899 PQITVEESVAYSAWLRLPTEVDSKTRREFVDEVIQTIELDDIRDALVGLPGVSGLSTEQR 958
Query: 171 XXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIFK 230
A +SNP ++ DEPT+GLD+ A+ V+ +K ++ +G+ V+C++HQPS +IF+
Sbjct: 959 KRLTIAVELVSNPSVIFMDEPTSGLDARAAAIVMRAVKNVADTGRTVVCTIHQPSIEIFE 1018
Query: 231 EFNSILLMAE-GNLLFHGT--QDACK--SFFESIDLHCPL--NYNPAEFYI 274
F+ ++LM G L++ G +C +FE+I + NYNP+ + +
Sbjct: 1019 AFDELMLMKRGGELIYAGPLGLHSCNVIHYFETIPGVPKIKDNYNPSTWML 1069
Score = 66.5 bits (155), Expect = 3e-11
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 186 LICDEPTTGLDSYNASQVIGILKKLS-ASGKIVICSVHQPSCDIFKEFNSILLMAEGNLL 244
L DE +TGLDS Q++ L++++ S ++ S+ QP+ + + F+ I+LMAEG ++
Sbjct: 352 LFMDEISTGLDSSTTFQIVSCLQQVAHISESTILVSLLQPAPETYDLFDDIILMAEGKIV 411
Query: 245 FHGTQDACKSFFESIDLHCPLNYNPAEFYIRAVS 278
+HG++ +FFES CP A+F +S
Sbjct: 412 YHGSKSCIMNFFESCGFKCPERKGAADFLQEVLS 445
Score = 44.0 bits (99), Expect = 2e-04
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKC--TLPFEGTVTINGRNVRDLT---GAEIVPQF 112
++ ++GP G GKTT L++LAGK L G V NG N+ + + Q+
Sbjct: 182 LKPSRLTLLLGPPGCGKTTLLLALAGKLDKNLKVTGEVEYNGANLNTFVPEKTSAYISQY 241
Query: 113 DVFTDSLTVMEQLVF 127
D+ +TV E L F
Sbjct: 242 DLHVPEMTVRETLDF 256
>09_04_0483 +
17979566-17980019,17980242-17980321,17980431-17980895,
17981460-17981597,17982574-17982660,17982781-17982909,
17983034-17983225,17983393-17983479,17983707-17984378
Length = 767
Score = 91.5 bits (217), Expect = 8e-19
Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 10/203 (4%)
Query: 55 NACIREGEFAAIIGPSGAGKTTFLVSLAGK--CTLPFEGTVTINGRNVRDLTG-AEIVPQ 111
N R GE AI+GPSG GK+T L +LAG+ ++ +G + INGR G + V Q
Sbjct: 124 NGYARPGEVLAIMGPSGCGKSTLLDALAGRLGSSVSQKGDILINGRRQALAFGTSAYVTQ 183
Query: 112 FDVFTDSLTVMEQLVFMTEMKL-GNSTKQPNKSILNTVIEEFKLSAHVET-----XXXXX 165
DV ++LTV E + + +++L + + + E L +T
Sbjct: 184 DDVLMNTLTVREAVRYSAQLQLPSGMSAAAKRERAEETLREMGLEGAADTRIGGWAHKGI 243
Query: 166 XXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLS-ASGKIVICSVHQP 224
L+ P +L DEPT+GLDS + V+ + +++ G V+ +VHQP
Sbjct: 244 SGGQRRRVSICMEILTRPALLFLDEPTSGLDSAASYHVVSRIARMARREGMTVVAAVHQP 303
Query: 225 SCDIFKEFNSILLMAEGNLLFHG 247
S ++F F+ + L+A G +F G
Sbjct: 304 STEVFGLFHGLCLLAYGKTVFFG 326
>12_02_0037 -
12613686-12614318,12614792-12614878,12614985-12615176,
12617246-12617371,12617479-12617565,12617994-12618458,
12618868-12618947,12619739-12619751
Length = 560
Score = 89.8 bits (213), Expect = 2e-18
Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 8/196 (4%)
Query: 91 GTVTINGRNVRDLTGAEI-VPQFDVFTDSLTVMEQLVFMTEMKLGNSTKQPNKSI-LNTV 148
G + INGR + G V Q +V +L+V E + + ++L ++ K V
Sbjct: 15 GVILINGRQEKLAFGTSAYVTQDNVLMSTLSVREAVYYSAHLQLPDTMLASEKRAHAERV 74
Query: 149 IEEFKLSAHVETXXXXXXXXXXXXX-----XXATSFLSNPQILICDEPTTGLDSYNASQV 203
I E LS ++T L+ P++L DEPT+GLDS + V
Sbjct: 75 IREMGLSDTMDTRIGGRITKGISGGQRKRMSICIEMLTRPRLLFLDEPTSGLDSAASYHV 134
Query: 204 IGILKKLSA-SGKIVICSVHQPSCDIFKEFNSILLMAEGNLLFHGTQDACKSFFESIDLH 262
+ + +++A G VI +VHQPS D+F F+ +LL+A G ++F GT FF
Sbjct: 135 MSHITRVAAREGMTVIAAVHQPSGDVFDLFHGLLLLAYGRMVFFGTVSNATEFFTQSGFP 194
Query: 263 CPLNYNPAEFYIRAVS 278
CP NP++ ++R ++
Sbjct: 195 CPHLRNPSDHFLRTIN 210
>03_06_0759 -
36059872-36059928,36059934-36060125,36060241-36060348,
36060440-36060712,36060923-36061009,36061085-36061276,
36061841-36061969,36062087-36062200,36062446-36062490,
36062785-36062956,36063229-36063515,36063989-36064456
Length = 707
Score = 89.8 bits (213), Expect = 2e-18
Identities = 77/270 (28%), Positives = 123/270 (45%), Gaps = 28/270 (10%)
Query: 61 GEFAAIIGPSGAGKTTFLVSLAGKCTLPFE---GTVTINGRNVRDLTGAE-IVPQFDVFT 116
G I+GP+ +GK+T L ++AG+ P E G V +N N R G+ V + DV
Sbjct: 108 GTLTVIMGPARSGKSTLLRAIAGRLR-PAERMYGQVLLNATNTRLPYGSYGFVDRHDVLI 166
Query: 117 DSLTVMEQLVFMTEMKLGNSTKQPNKSILNTVIEEFKLSAHVETXXX------XXXXXXX 170
DSLTV E L + ++L SI+ I L+ + +
Sbjct: 167 DSLTVREMLYYSAHLQLPGLFSSKT-SIVEDAIAAMSLADYADNLIGGHCFINSLPAGER 225
Query: 171 XXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIFK 230
A + P +L DEP LDS +A ++ LKKL+++G VI +++Q S ++F
Sbjct: 226 RRLSIARELVMRPHVLFIDEPLYHLDSVSALLLMVTLKKLASTGCTVIFTMYQSSTEVFG 285
Query: 231 EFNSILLMAEGNLLFHGTQDAC----KS-----------FFESIDLHCPLNYNPAEFYIR 275
F+ I L++ GN LF G +C KS F + CP+ +P++ ++R
Sbjct: 286 LFDRICLLSNGNTLFFGETLSCLQDTKSETHARLQVTLVHFSNAGFPCPIMQSPSDHFLR 345
Query: 276 AVSNHNGVCIKKMLENYQDQSLDCDETGLE 305
A+ N + I M +N QD D ++
Sbjct: 346 AI-NTDFDRIIAMCKNLQDDQGDFSSVSMD 374
>01_01_0548 - 4033077-4033349,4034007-4034261,4034362-4034533,
4034616-4034839,4035168-4035332,4035591-4035881,
4035971-4036303,4036391-4036485,4036570-4036689,
4036778-4036934,4037176-4037279,4037383-4037543,
4037636-4037952,4038655-4038936,4039020-4039321,
4039453-4039543,4040227-4040280,4040367-4040684,
4041008-4041092,4041178-4041266,4041474-4041594,
4042136-4042431
Length = 1434
Score = 89.4 bits (212), Expect = 3e-18
Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 11/194 (5%)
Query: 51 VIID-NACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPF-EGTVTINGRNVRDLTGAEI 108
++ID R G A++G SGAGKTT + LAG+ T EG++TI+G T I
Sbjct: 878 LLIDVTGAFRPGILTALVGVSGAGKTTLMDVLAGRKTGGLIEGSITISGYPKNQETFTRI 937
Query: 109 ---VPQFDVFTDSLTVMEQLVFMTEMKLGNSTKQPNKSI-LNTVIEEFKLSAHVETXXXX 164
Q DV + LTV+E L++ ++L + + + + V+E +L+A
Sbjct: 938 SGYCEQNDVHSPCLTVIESLLYSACLRLPSHVDVNTRRVFVEEVMELVELNALSGALVGL 997
Query: 165 -----XXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVIC 219
A ++NP I+ DEPT+GLD+ +A+ V+ ++ + +G+ ++C
Sbjct: 998 PGVNGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARSAAIVMRTVRNIVNTGRTIVC 1057
Query: 220 SVHQPSCDIFKEFN 233
++HQPS DIF+ F+
Sbjct: 1058 TIHQPSIDIFESFD 1071
Score = 57.6 bits (133), Expect = 1e-08
Identities = 29/100 (29%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 180 LSNPQILICDEPTTGLDSYNASQVIGILKKLS-ASGKIVICSVHQPSCDIFKEFNSILLM 238
+ + ++L DE +TGLDS Q+I L+ + A I S+ QP+ + ++ F+ ++L+
Sbjct: 356 VGSARVLFMDEISTGLDSATTYQIIKYLRHSTHALDGTTIISLLQPAPETYELFDDVILI 415
Query: 239 AEGNLLFHGTQDACKSFFESIDLHCPLNYNPAEFYIRAVS 278
+EG +++ G ++ FF + CP N A+F +S
Sbjct: 416 SEGQIVYQGPREYAVDFFAGMGFRCPERKNVADFLQEVLS 455
Score = 44.0 bits (99), Expect = 2e-04
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 49 KTVIIDNAC--IREGEFAAIIGPSGAGKTTFLVSLAGKC--TLPFEGTVTINGRNVRDLT 104
K I+DN IR ++GP +GKTT L++LAG+ L G +T NG ++ +
Sbjct: 154 KLPILDNVSGIIRPSRMTLLLGPPSSGKTTLLLALAGRLGPGLKVSGNITYNGHHLNEFV 213
Query: 105 ---GAEIVPQFDVFTDSLTVMEQLVF 127
+ V Q D +TV E L F
Sbjct: 214 PQRTSAYVSQQDWHASEMTVRETLEF 239
>06_03_0437 -
20765682-20765951,20766040-20766294,20766374-20766545,
20766964-20767097,20767205-20767288,20767369-20767659,
20767867-20768214,20768321-20768496,20768579-20768695,
20768780-20768936,20769110-20769225,20769323-20769483,
20769567-20769883,20769969-20770250,20770347-20770648,
20771977-20772067,20773203-20773256,20773723-20773812
Length = 1138
Score = 86.2 bits (204), Expect = 3e-17
Identities = 70/242 (28%), Positives = 115/242 (47%), Gaps = 22/242 (9%)
Query: 59 REGEFAAIIGPSGAGKTTFLVSLAGKCTLPF-EGTVTINGRNVRDLTGAEI---VPQFDV 114
R A++G SGAGKTT + LAG+ T + EG + I+G T A I Q D+
Sbjct: 644 RPAVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDMRISGYPKNQETFARISGYCEQNDI 703
Query: 115 FTDSLTVMEQLVFMTEM----KLGNS--TKQPNKSILNTVIEEFKLSAHVETXX-----X 163
+ +TV E L++ + K+G+ T ++ V+E +L +
Sbjct: 704 HSPQVTVRESLIYSAFLRLPEKIGDQEITDDIKIQFVDEVMELVELDNLKDALVGLPGIT 763
Query: 164 XXXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQ 223
A ++NP I+ DEPT+GLD+ A+ V+ ++ +G+ V+C++HQ
Sbjct: 764 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQ 823
Query: 224 PSCDIFKEFNSILLMAEGNLLFHGTQDACKS-----FFESIDLHCPL--NYNPAEFYIRA 276
PS DIF+ F+ +LL+ G + + Q S +FE+I + YNPA + +
Sbjct: 824 PSIDIFEAFDELLLLKRGGQVIYSGQLGRNSQKMIEYFEAIPGVPKIKDKYNPATWMLEV 883
Query: 277 VS 278
S
Sbjct: 884 SS 885
Score = 62.1 bits (144), Expect = 6e-10
Identities = 29/90 (32%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 184 QILICDEPTTGLDSYNASQVIGILKKLSASGKI-VICSVHQPSCDIFKEFNSILLMAEGN 242
++L DE +TGLDS Q++ L+++ G+ ++ S+ QP+ + F+ F+ I+L++EG
Sbjct: 87 KVLFMDEISTGLDSSTTFQIVKCLQQIVHLGEATILMSLLQPAPETFELFDDIILLSEGQ 146
Query: 243 LLFHGTQDACKSFFESIDLHCPLNYNPAEF 272
+++ G ++ FFES CP A+F
Sbjct: 147 IVYQGPREYVLEFFESCGFRCPERKGTADF 176
>09_01_0129 -
1954470-1955129,1956285-1956371,1956475-1956663,
1956772-1956900,1957386-1957472,1957572-1958036,
1959844-1959923,1961295-1961358,1961444-1961455
Length = 590
Score = 83.4 bits (197), Expect = 2e-16
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 8/200 (4%)
Query: 87 LPFEGTVTINGRNVRDLTGAEI-VPQFDVFTDSLTVMEQLVFMTEMKLGNSTKQPNK-SI 144
L +G + +NGR + G V Q +V +LTV E + + +++L ++ K
Sbjct: 32 LKMKGQILVNGRCQQLAFGTSAYVTQENVLMATLTVREAIYYSAQIQLPDTMTMAEKLRR 91
Query: 145 LNTVIEEFKLSAHVETXXXXXXXXXXXXX-----XXATSFLSNPQILICDEPTTGLDSYN 199
+ + E L+ ++T L+ P++L DEPT+GLDS
Sbjct: 92 ADETVREMGLTGTLDTRIGGRSSKGISGGQQKRLSICLDILTRPRLLFLDEPTSGLDSAA 151
Query: 200 ASQVIGILKKLSA-SGKIVICSVHQPSCDIFKEFNSILLMAEGNLLFHGTQDACKSFFES 258
+ V+ + L+A G V+ VHQP ++F+ F+ + L+A GN +F G FF S
Sbjct: 152 SFHVMSRIIGLAAREGMTVVAVVHQPCSEVFELFHVLCLLAAGNTIFFGPASMAAEFFAS 211
Query: 259 IDLHCPLNYNPAEFYIRAVS 278
CP NP++ ++R V+
Sbjct: 212 NGYPCPPMRNPSDHFLRTVN 231
>05_04_0148 -
18426903-18427106,18430516-18430594,18430752-18430935,
18431020-18431063,18432028-18432165,18432713-18434511
Length = 815
Score = 83.4 bits (197), Expect = 2e-16
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 21/231 (9%)
Query: 62 EFAAIIGPSGAGKTTFLVSLAGKCT-----LPFEGTVTINGRNVRDLTGAE----IVPQF 112
+ A++GPSGAGK+T L L+G+ T V++NGR V V Q
Sbjct: 96 QILAVVGPSGAGKSTLLRILSGRGTGGEIAARPHAVVSVNGRAVTSRARLRRMCGFVTQD 155
Query: 113 DVFTDSLTVMEQLVFMTEMKLGNS-TKQPNKSILNTVIEEFKLSAHVETXXXXXXXXXXX 171
D LTV E ++F +L ++ T + + +++E +LS ++
Sbjct: 156 DNLLPLLTVRETILFAARFRLRSAVTARERGERVEALMQELRLSEVADSYVGGCGGAGGA 215
Query: 172 ----------XXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLS-ASGKIVICS 220
A + +P +L+ DEPT+GLDS +A V+ +L+ ++ A ++V+ S
Sbjct: 216 PRGVSGGERKRVSIAVDIVHDPPVLLLDEPTSGLDSRSAMDVLSLLRDVARARRQVVVLS 275
Query: 221 VHQPSCDIFKEFNSILLMAEGNLLFHGTQDACKSFFESIDLHCPLNYNPAE 271
+HQPS + +S+LL++ G + GT + + + P+ NP E
Sbjct: 276 IHQPSYRMLAYISSMLLLSRGAVAHFGTLKSLEHSLSRLGHEIPMQLNPLE 326
>10_03_0021 +
7129786-7130117,7130227-7130347,7131048-7131136,
7131375-7131459,7131609-7131771,7132861-7132937,
7133016-7133160,7133236-7133537,7133615-7133720,
7134781-7134935,7135556-7135712,7135799-7135891,
7136232-7136359,7136439-7136696,7136855-7137145,
7137235-7137318,7138335-7138468,7138557-7138784,
7139778-7139958,7140021-7140108,7140268-7140434,
7140750-7141012,7141117-7141120
Length = 1216
Score = 83.0 bits (196), Expect = 3e-16
Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 30/225 (13%)
Query: 65 AIIGPSGAGKTTFLVSLAGKCTLPF-EGTVTINGRNVRDLTGAEI---VPQFDVFTDSLT 120
A++G SG+GKTT + LAG+ T + EG + I+G T A I V Q D+ +
Sbjct: 680 ALVGASGSGKTTLMDVLAGRKTGGYIEGDIRISGHKKEQRTFARIAGYVEQNDIHSPQAF 739
Query: 121 VMEQLVFMTEMKLGNSTKQPNKSILNTVIEEFKLSAHVETXXXXXXXXXXXXXXXATSFL 180
V E+++ + E+ + + E+ K A +
Sbjct: 740 V-EEVMALVELDQIRYALVGKQGLTGLSTEQRK------------------RLTIAVELV 780
Query: 181 SNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIFKEFNSILLMAE 240
+NP I+ DEPT+GLD+ A+ V+ ++ +G+ V+C++HQPS DIF+ F+ +LLM
Sbjct: 781 ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKR 840
Query: 241 GNLLFHGTQDACKS-----FFESIDLHCPL--NYNPAEFYIRAVS 278
G + +G S +F+ I P+ YNPA + + +
Sbjct: 841 GGRVIYGGSLGVNSVDMINYFQGIPRVVPITEGYNPATWMLEVTT 885
Score = 48.4 bits (110), Expect = 7e-06
Identities = 24/88 (27%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 186 LICDEPTTGLDSYNASQVIGILKK-LSASGKIVICSVHQPSCDIFKEFNSILLMAEGNLL 244
L+ DE +TGLDS Q++ ++ + V+ S+ QP+ + F+ F+ ++L++EG ++
Sbjct: 348 LLMDEISTGLDSSTTFQIVNCMRNFVHEMEATVLMSLLQPAPETFELFDDLILLSEGKII 407
Query: 245 FHGTQDACKSFFESIDLHCPLNYNPAEF 272
+ G +F+S+ P A+F
Sbjct: 408 YQGPIKHVVDYFKSLGFSLPPRKGIADF 435
Score = 37.1 bits (82), Expect = 0.018
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 47 KPKTVIIDNAC--IREGEFAAIIGPSGAGKTTFLVSLAGK--CTLPFEGTVTINGRNVRD 102
K K VI+D+ I+ G ++GP +GK+T L++LA K L G V NG +
Sbjct: 164 KHKLVILDDVSGVIKPGRMTLLLGPPASGKSTLLLALADKLDSQLKKSGEVAYNGMALDQ 223
Query: 103 L---TGAEIVPQFDVFTDSLTVMEQLVF 127
+ + Q D LTV E L F
Sbjct: 224 FCVQRTSAYISQTDNHIGELTVRETLDF 251
>07_01_1182 +
11207282-11207330,11208015-11208094,11208181-11208645,
11213485-11213568,11213925-11214113,11214191-11214277,
11214343-11214969
Length = 526
Score = 80.6 bits (190), Expect = 1e-15
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 8/200 (4%)
Query: 87 LPFEGTVTING-RNVRDLTGAEIVPQFDVFTDSLTVMEQLVFMTEMKLGNSTKQPNKSI- 144
+ G + ING R + V Q +V +LTV E + + +++L +S +K
Sbjct: 23 MKMRGDILINGLREKLSFGTSAYVTQENVLMATLTVTEAVHYSAQLQLPDSMPAEDKRAR 82
Query: 145 LNTVIEEFKLSAHVETXXXXX-----XXXXXXXXXXATSFLSNPQILICDEPTTGLDSYN 199
+ I + L A L++P +L DEPT+GLDS
Sbjct: 83 ADRAIRQMGLGAVAGVRIGGRVCKGISGGQRKRVSICVELLASPALLFLDEPTSGLDSAA 142
Query: 200 ASQVIGILKKLSA-SGKIVICSVHQPSCDIFKEFNSILLMAEGNLLFHGTQDACKSFFES 258
+ V+ + L+ G V+ +VHQPS ++F+ F+ + L+A G ++ G FFES
Sbjct: 143 SYHVMSRIAGLARRDGMTVVAAVHQPSTEMFELFHGLCLLATGRTVYFGAASDAIEFFES 202
Query: 259 IDLHCPLNYNPAEFYIRAVS 278
CPL NP++ ++R ++
Sbjct: 203 NGFPCPLRRNPSDHFLRMIN 222
>09_02_0067 -
3812508-3813158,3813944-3814030,3814124-3814312,
3814475-3814603,3814917-3815003,3815126-3815563
Length = 526
Score = 78.2 bits (184), Expect = 8e-15
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 7/168 (4%)
Query: 118 SLTVMEQLVFMTEMKLGNSTKQPNK-SILNTVIEEFKLSAHVETXXXXXXXXXXXXX--- 173
+LTV E + + +++L ++ NK + + E L++ ++T
Sbjct: 3 TLTVREAIYYSAQIQLPDTMTVANKLARAEDTVREMGLTSALDTRIGGRSSKGISGGQQK 62
Query: 174 --XXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSA-SGKIVICSVHQPSCDIFK 230
L+ P++L DEPT+GLDS + V+ + L+A G VI VHQP ++F+
Sbjct: 63 RLSICLEILTRPRLLFLDEPTSGLDSAASFHVMSRITDLAAREGMTVIAVVHQPCSEVFE 122
Query: 231 EFNSILLMAEGNLLFHGTQDACKSFFESIDLHCPLNYNPAEFYIRAVS 278
F+ + L+A G+ +F G FF S CP NP++ ++R V+
Sbjct: 123 LFHGLCLLAAGSTIFFGPASTAAEFFASNGYPCPPMRNPSDHFLRTVN 170
>08_02_0582 +
18993816-18993890,18994050-18994446,18995645-18995748,
18995863-18996004,18996118-18996237,18996341-18996465,
18996903-18997061,18997161-18997323,18997420-18997545,
18997628-18997711,18997761-18998173,18998199-18998273,
18998463-18998663,18998862-18998971,18999072-18999156,
18999365-18999493,18999596-18999701,18999825-18999913,
19000064-19000366
Length = 1001
Score = 74.1 bits (174), Expect = 1e-13
Identities = 61/254 (24%), Positives = 117/254 (46%), Gaps = 16/254 (6%)
Query: 13 IQVLLDEFENKDAIIVRNLKVWTPEEKSIWRKVAKPKTVIIDNACIREGEFAAIIGPSGA 72
++ LL E + ++ II NLK P + K+A + +R+G+ ++GP+GA
Sbjct: 665 VKKLLKEMDMRNMIICHNLKKVYPGKNGNPDKLAVKGLSL----ALRKGQCFGMLGPNGA 720
Query: 73 GKTTFLVSLAGKCTLPFEGTVTINGRNVR-DLT----GAEIVPQFDVFTDSLTVMEQLVF 127
GKT+F+ + G P GT I+G ++R D+ + PQ D+ ++LT E L+F
Sbjct: 721 GKTSFINMMIG-LVAPTYGTAYIHGMDLRRDMNEIYANIGVCPQHDLLWETLTGREHLMF 779
Query: 128 MTEMKLGNSTKQPNKSILNTVIEEFKL--SAHVETXXXXXXXXXXXXXXXATSFLSNPQI 185
+K N T +N ++ L S + A + + NP++
Sbjct: 780 YGRLK--NLTGAALLKAVNESLKSVNLFHSGFGDKSVNKYSGGMKRRLSVAIALIGNPKV 837
Query: 186 LICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIFKEFNSILLMAEGNLLF 245
+ DEP+TGLD+ + S + ++K+ + I++ + + + + + + +GN
Sbjct: 838 VYMDEPSTGLDTTSRSNLWNVIKRAKKNCTIILTTHSMEEAE--ELCDRVGIFVDGNFQC 895
Query: 246 HGTQDACKSFFESI 259
GT K+ + +
Sbjct: 896 LGTPKELKARYGGV 909
>12_02_0031 -
12477787-12478413,12480182-12480268,12480371-12480562,
12480638-12480766,12480840-12480926,12483076-12483537,
12485088-12485222
Length = 572
Score = 72.1 bits (169), Expect = 5e-13
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 8/177 (4%)
Query: 109 VPQFDVFTDSLTVMEQLVFMTEMKLGNSTKQPNKSI-LNTVIEEFKLSAHVETXXXXXXX 167
V Q +V +L+V E + + ++L ++ K VI+E L ++T
Sbjct: 48 VTQDNVLMSTLSVREAIYYSAHLQLPDTMLVSEKRTHAEHVIQEMGLDDIMDTRIGGRIT 107
Query: 168 XXXXXX-----XXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSA-SGKIVICSV 221
L+ P++L DEPT+GLDS + V+ + ++A G V+ +V
Sbjct: 108 KGISGGQRKRVSICVEMLTRPRLLFLDEPTSGLDSAASYHVMSHITSVAAGEGMTVVAAV 167
Query: 222 HQPSCDIFKEFNSILLMAEGNLLFHGTQDACKSFFESIDLHCPLNYNPAEFYIRAVS 278
HQP ++F+ F+S+ L+A G +F GT FF CP NP+E ++ ++
Sbjct: 168 HQPG-EVFELFHSLCLLAHGRTVFLGTVSDATEFFNLNGFPCPCLRNPSEHFLGTIN 223
>02_02_0654 -
12662931-12663200,12663296-12663550,12664097-12664268,
12664354-12664581,12664727-12664860,12665018-12665101,
12665332-12665538,12665641-12665973,12666175-12666281,
12666439-12666593,12666778-12666810,12666924-12666972,
12667152-12667312,12667413-12668313,12668391-12668481,
12668558-12668749
Length = 1123
Score = 68.1 bits (159), Expect = 8e-12
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 10/173 (5%)
Query: 55 NACIREGEFAAIIGPSGAGKTTFLVSLAGKCTL-PFEGTVTINGRNVRDLTGAEI---VP 110
+ R G A++G SGAGKTT + LAG+ T EG++T++G + + T A I
Sbjct: 582 SGAFRPGLLTALVGVSGAGKTTLMDVLAGRKTSGTIEGSITLSGYSKKQETFARISGYCE 641
Query: 111 QFDVFTDSLTVMEQLVFMTEMKL-----GNSTKQPNKSILNTVIEEFKLSAHVET-XXXX 164
Q D+ + ++TV E +++ ++L N+ K + ++ V + +A V
Sbjct: 642 QADIHSPNVTVYESILYSAWLRLPSDVDSNTRKMFVEEVMALVELDVLCNAMVGLPGVSG 701
Query: 165 XXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIV 217
A ++NP I+ DEPT+GLD+ A+ V+ L L G+++
Sbjct: 702 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTLLLLKRGGRVI 754
Score = 56.0 bits (129), Expect = 4e-08
Identities = 29/95 (30%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 180 LSNP-QILICDEPTTGLDSYNASQVIGILKKL-SASGKIVICSVHQPSCDIFKEFNSILL 237
L+ P + L+ DE +TGLDS + ++ ++ L + V+ S+ QP + + F+ I+L
Sbjct: 98 LTGPARALLMDEISTGLDSSSTFHIVKFIRHLVHIMNETVMISLLQPPPETYNLFDDIVL 157
Query: 238 MAEGNLLFHGTQDACKSFFESIDLHCPLNYNPAEF 272
++EG +++HG ++ FFE+ CP A+F
Sbjct: 158 LSEGYIVYHGPRENILEFFEASGFRCPQRKAVADF 192
>07_03_0635 + 20151861-20152249,20152589-20152709,20154914-20154996,
20155819-20155903,20155987-20156277,20156555-20156645,
20157380-20158280,20158401-20158561,20158759-20158862,
20159040-20159205,20159283-20159378,20159694-20159800,
20160443-20160775,20161393-20161599,20161774-20161857,
20162887-20163020,20163166-20163393,20163541-20163712,
20164301-20164555,20164647-20164919
Length = 1426
Score = 67.7 bits (158), Expect = 1e-11
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 10/173 (5%)
Query: 55 NACIREGEFAAIIGPSGAGKTTFLVSLAGKCTL-PFEGTVTINGRNVRDLTGAEI---VP 110
+ R G A++G SGAGKTT + LAG+ T EG + ++G + T A I
Sbjct: 884 SGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTSGTIEGDIKLSGYPKKQETFARISGYCE 943
Query: 111 QFDVFTDSLTVMEQLVFMTEMKLGNST-KQPNKSILNTVIEEFKLSAHVETXX-----XX 164
Q D+ + +LTV E +V+ ++L + K K + V+ +L +
Sbjct: 944 QTDIHSPNLTVYESIVYSAWLRLSSEVDKNTRKVFVEEVMSLVELDVLRDALVGLPGVSG 1003
Query: 165 XXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIV 217
A ++NP I+ DEPT+GLD+ A+ V+ L L G+++
Sbjct: 1004 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTLLLLKRGGRVI 1056
Score = 58.8 bits (136), Expect = 5e-09
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 186 LICDEPTTGLDSYNASQVIGILKKLS-ASGKIVICSVHQPSCDIFKEFNSILLMAEGNLL 244
L DE +TGLDS + Q++ +++++ V+ S+ QP + + F+ I+L+AEG ++
Sbjct: 364 LFMDEISTGLDSSSTFQIVKYIRQVTHVMNATVMMSLLQPPPETYALFDDIVLIAEGYIV 423
Query: 245 FHGTQDACKSFFESIDLHCPLNYNPAEF 272
+HG ++ FFES CP A+F
Sbjct: 424 YHGPRENILEFFESAGFRCPERKGVADF 451
Score = 34.7 bits (76), Expect = 0.097
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 55 NACIREGEFAAIIGPSGAGKTTFLVSLAGK--CTLPFEGTVTINGRNVRDL---TGAEIV 109
N I+ ++GP +GK+T + +L GK L G +T G ++ + V
Sbjct: 191 NGIIKPSRMTLLLGPPSSGKSTLMRALTGKPDKNLKVSGEITYCGHTFKEFYPERTSAYV 250
Query: 110 PQFDVFTDSLTVMEQLVF 127
Q D+ +TV E L F
Sbjct: 251 SQHDLHNPEMTVRETLDF 268
>09_02_0496 -
9892242-9892499,9892956-9893045,9893046-9893094,
9893330-9893557,9894095-9894261,9894312-9894395,
9894614-9894820,9894919-9895251,9895371-9895513,
9895607-9895723,9895824-9895980,9896054-9896157,
9896272-9896432,9896518-9896707,9896732-9896834,
9896950-9897231,9897327-9897649,9897750-9897786,
9898109-9898162,9898292-9898368,9898449-9898502,
9898738-9898822,9900289-9900426,9900592-9900603
Length = 1150
Score = 66.9 bits (156), Expect = 2e-11
Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 11/185 (5%)
Query: 59 REGEFAAIIGPSGAGKTTFLVSLAGKCTL-PFEGTVTINGRNVRDLTGAEI---VPQFDV 114
R G A++G SGAGKTT L LAG+ T G +T++G + T + + Q D+
Sbjct: 702 RPGVLTALMGISGAGKTTLLDVLAGRKTSGHIHGNITVSGYPKKQETFSRVSGYCEQNDI 761
Query: 115 FTDSLTVMEQLVFMTEMKL-GNSTKQPNKSILN---TVIEEFKLSAHVE--TXXXXXXXX 168
+ +LTV E L+F ++L K ++ ++E F L +
Sbjct: 762 HSPNLTVYESLMFSAWLRLPAEIDSMARKRFIDEFMELVELFPLKDALVGLLGLSGLSTE 821
Query: 169 XXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGK-IVICSVHQPSCD 227
A ++NP I+ DEPT+GLD+ A+ V+ L + G+ I + + Q SC+
Sbjct: 822 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTLFLMKRGGEAIYVGPLGQHSCE 881
Query: 228 IFKEF 232
+ K F
Sbjct: 882 LIKYF 886
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/88 (26%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 186 LICDEPTTGLDSYNASQVIGILKK-LSASGKIVICSVHQPSCDIFKEFNSILLMAEGNLL 244
L DE + GLDS Q++ +++ + G + ++ QP+ + ++ F+ I+L+++G ++
Sbjct: 170 LFMDEISNGLDSSTTFQIVNTIQQTIHVLGGTAVIALLQPAPETYELFDDIILLSDGQVV 229
Query: 245 FHGTQDACKSFFESIDLHCPLNYNPAEF 272
+ G +D FF+S+ C A+F
Sbjct: 230 YSGPRDHVLEFFKSLGFKCLERIGVADF 257
>02_02_0028 +
6196453-6196512,6196936-6197320,6197843-6197925,
6198060-6198183,6198404-6198523,6198595-6198755,
6198999-6199157,6199272-6199434,6199604-6199729,
6199775-6199900,6200400-6200764,6201204-6201404,
6201685-6201794,6201919-6202003,6202553-6202681,
6202763-6202868,6202984-6203072,6203172-6203474
Length = 964
Score = 66.5 bits (155), Expect = 3e-11
Identities = 59/250 (23%), Positives = 107/250 (42%), Gaps = 16/250 (6%)
Query: 12 TIQVLLDEFENKDAIIVRNLKVWTPEEKSIWRKVAKPKTVIIDNACIREGEFAAIIGPSG 71
T++ +L E +N +II NLK + +K+A + + G+ ++GP+G
Sbjct: 627 TVEQILQESKNSYSIICDNLKKVYHGKDGNAKKIAVRGLSL----SMPRGQCFGVLGPNG 682
Query: 72 AGKTTFLVSLAGKCTLPFEGTVTINGRNV-----RDLTGAEIVPQFDVFTDSLTVMEQLV 126
AGKTT + L G T P GT I G ++ + G + PQ D+ ++LT E L+
Sbjct: 683 AGKTTLINMLTG-FTKPTSGTAYIEGMDIQFEMNKIYAGIGVCPQHDLLWETLTGREHLL 741
Query: 127 FMTEMKLGNSTKQPNKSILNTVIEEFKLSAH--VETXXXXXXXXXXXXXXXATSFLSNPQ 184
F +K N P + ++ +L A + A S + +P+
Sbjct: 742 FYGRLK--NLRGAPLSQAIEKSLKSVRLFAGGIADKLVSKYSGGMKRRLSVAISLIGDPK 799
Query: 185 ILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIFKEFNSILLMAEGNLL 244
++ DEP++GLD + + +K I++ + + + I ++A G+L
Sbjct: 800 VVYMDEPSSGLDPASRKDLWNAVKSAKQDRAIILTTHSMEEAEFL--CDRIGIIANGSLQ 857
Query: 245 FHGTQDACKS 254
G K+
Sbjct: 858 CIGNSKELKA 867
>11_06_0223 - 21419128-21419397,21419493-21419747,21420243-21420414,
21420530-21420757,21420916-21421049,21421309-21421392,
21421554-21421760,21421871-21422203,21422343-21422449,
21422823-21422988,21423127-21423230,21423347-21423507,
21423595-21424495,21424642-21424732,21424837-21425127,
21425491-21425575,21425665-21425747,21427653-21427773,
21427785-21428260
Length = 1422
Score = 64.5 bits (150), Expect = 1e-10
Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 10/169 (5%)
Query: 59 REGEFAAIIGPSGAGKTTFLVSLAGKCTLP-FEGTVTINGRNVRDLTGAEI---VPQFDV 114
R G A++G SGAGKTT + LAG+ T EG +T++G + T A I Q D+
Sbjct: 885 RPGVLTALVGVSGAGKTTLMDVLAGRKTSGVIEGDITLSGYPKKQETFARISGYCEQTDI 944
Query: 115 FTDSLTVMEQLVFMTEMKLG-----NSTKQPNKSILNTVIEEFKLSAHVET-XXXXXXXX 168
+ ++TV E +++ ++L N+ K +++ V + +A V
Sbjct: 945 HSPNVTVYESILYSAWLRLSSDVDTNTRKMFVDEVMSLVELDVLRNALVGLPGVSGLSTE 1004
Query: 169 XXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIV 217
A ++NP ++ DEPT+GLD+ A+ V+ L L G+++
Sbjct: 1005 QRKRLTIAVELVANPSVIFMDEPTSGLDARAAAIVMRTLLLLKRGGQVI 1053
Score = 55.2 bits (127), Expect = 6e-08
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 180 LSNP-QILICDEPTTGLDSYNASQVIGILKKL-SASGKIVICSVHQPSCDIFKEFNSILL 237
L+ P + L DE +TGLDS + +++ + L + V+ S+ QP + + F+ I+L
Sbjct: 386 LTGPARALFMDEISTGLDSSSTFEIVKYIGHLVHVMNETVMISLLQPPPETYNLFDDIIL 445
Query: 238 MAEGNLLFHGTQDACKSFFESIDLHCPLNYNPAEF 272
++EG +++HG ++ FFE+ CP A+F
Sbjct: 446 LSEGYIVYHGPRENILEFFENAGFRCPERKGIADF 480
Score = 33.5 bits (73), Expect = 0.22
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKC--TLPFEGTVTINGRNVRDL---TGAEIVPQF 112
I+ ++GP +GK+T + +L GK L G +T G + + V Q+
Sbjct: 223 IKPSRMTLLLGPPSSGKSTLMRALTGKLDKNLKVSGDITYCGHTFSEFYPERTSAYVSQY 282
Query: 113 DVFTDSLTVMEQLVF 127
D+ +TV E L F
Sbjct: 283 DLHNAEMTVRETLDF 297
>08_02_0580 -
18953208-18953513,18953668-18953868,18953929-18954009,
18954096-18954410,18954493-18954636,18954733-18954822,
18954907-18954983,18955122-18955182,18955264-18955490,
18955581-18955740,18955825-18956025,18956114-18956209,
18956380-18956565,18956641-18956810,18957044-18957275,
18958652-18959029
Length = 974
Score = 63.3 bits (147), Expect = 2e-10
Identities = 50/180 (27%), Positives = 74/180 (41%), Gaps = 13/180 (7%)
Query: 85 CTLPFEGTVTINGRNVRDLTGAE-------IVPQFDVFTDSLTVMEQLVFMTEMK-LGNS 136
C L G I G +VR G + PQFD+ D+LT E + +K L S
Sbjct: 563 CLLGPNGAAMIYGHSVRSTAGMSNIRRMIGVCPQFDILWDALTAKEHMELFASIKGLPPS 622
Query: 137 TKQPNKSILNTVIEEFKLSAHVETXXXXXXXXXXXXXXXATSFLSNPQILICDEPTTGLD 196
T KS+ + + KLS A + + +P+++ DEPTTG+D
Sbjct: 623 TI---KSVAEQSLIQVKLSQAANVRAGSYSGGMKRRLSVAIALIGDPKLVFLDEPTTGMD 679
Query: 197 SYNASQVIGILKKLSASGKIVICSVHQPSCDIFKEFNSILLMAEGNLLFHGTQDACKSFF 256
V I+++ IV+ + DI + I +MA+G L GT KS F
Sbjct: 680 PITRRHVWDIIEEAKKGRAIVLTTHSMEEADILSD--RIAIMAKGKLRCIGTSIRLKSKF 737
>08_02_0581 +
18986084-18986176,18986284-18986668,18986779-18986861,
18986966-18987110,18987823-18987951,18988047-18988171,
18988261-18988419,18988503-18988665,18988750-18988875,
18989110-18989471,18989572-18989772,18989873-18989982,
18990079-18990163,18990298-18990426,18990505-18990610,
18990688-18990776,18990885-18991184
Length = 929
Score = 57.6 bits (133), Expect = 1e-08
Identities = 52/216 (24%), Positives = 97/216 (44%), Gaps = 20/216 (9%)
Query: 13 IQVLLDEFENKDAIIVRNLKVWTPEEKSIWRKVAKPKTVIID--NACIREGEFAAIIGPS 70
++ LL E AII NLK K K P + + + + +G+ ++GP+
Sbjct: 594 VEQLLLEPNASQAIICDNLK------KVYHGKDGNPDKLAVRGLSLALPKGQCFGMLGPN 647
Query: 71 GAGKTTFLVSLAGKCTLPFEGTVTINGRNVR-DL----TGAEIVPQFDVFTDSLTVMEQL 125
GAGKT+F+ + G P GT ++G ++ D+ T + PQ D+ ++LT E L
Sbjct: 648 GAGKTSFISMMIGLIP-PTSGTALVHGMDINTDMDSIYTNMGVCPQHDLLWETLTGKEHL 706
Query: 126 VF---MTEMKLGNSTKQPNKSILNTVIEEFKLSAHVETXXXXXXXXXXXXXXXATSFLSN 182
+F + +K K + S+ N + + A S + +
Sbjct: 707 LFYGRLKNLKGAELEKAVDDSLKNVNLFHGGVG---NKQVGKYSGGMKRRLSVAISLIGD 763
Query: 183 PQILICDEPTTGLDSYNASQVIGILKKLSASGKIVI 218
P+++ DEP+TGLD + + + ++K+ + I++
Sbjct: 764 PKVVFMDEPSTGLDPASRNNLWNVVKEAKKNRAIIL 799
>01_07_0370 - 43119049-43120278,43121376-43121420,43121421-43121662,
43121908-43122686,43123123-43123463,43123565-43123785,
43123866-43124176,43124257-43124516,43124836-43124918,
43124940-43125036,43125132-43125305,43126215-43126592
Length = 1386
Score = 56.4 bits (130), Expect = 3e-08
Identities = 53/217 (24%), Positives = 101/217 (46%), Gaps = 17/217 (7%)
Query: 47 KPKTVIIDNACIRE--GEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGR-----N 99
+P+T+++ N +R G+ A++G SG+GK+T ++SL + P G V ++GR N
Sbjct: 1149 RPETMVLSNFSLRVNGGQTVAVVGVSGSGKST-IISLIERFYDPTAGQVLLDGRDLKLFN 1207
Query: 100 VRDL-TGAEIVPQFDVFTDSLTVMEQLVF----MTEMKLGNSTKQPNKSILNTVIEEFKL 154
+R L + +VPQ D S T+ E +++ TE ++ + + N + +
Sbjct: 1208 LRWLRSHMGLVPQ-DPVIFSTTIRENIIYARHNATESEMKEAARIANAHHFISSLPH-GY 1265
Query: 155 SAHVETXXXXXXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASG 214
HV A L N IL+ DE ++ ++S ++ V L L
Sbjct: 1266 DTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSAIESESSRVVQEALDTLIMGN 1325
Query: 215 KIVICSVHQPSCDIFKEFNSILLMAEGNLLFHGTQDA 251
K + H+ + + K ++I+++ G ++ GT D+
Sbjct: 1326 KTTVLIAHRAA--MMKHVDNIVVLNGGKIVEQGTHDS 1360
Score = 45.6 bits (103), Expect = 5e-05
Identities = 44/193 (22%), Positives = 81/193 (41%), Gaps = 11/193 (5%)
Query: 65 AIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTD-----SL 119
A++G +G+GK++ ++ L + P G V ++G N+++L + Q + T SL
Sbjct: 410 ALVGRNGSGKSS-IIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSL 468
Query: 120 TVMEQLVFMTEMKLGNSTKQPNKSILNTVIEEFK--LSAHVETXXXXXXXXXXXXXXXAT 177
++ E + + + + +T I + V A
Sbjct: 469 SIRENIAYGRSATTDQIEEAAKTAHAHTFISSLEKGYDTQVGRAGLSLTEEQKIKLSIAR 528
Query: 178 SFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIFKEFNSILL 237
+ LSNP IL+ DE T LD + A + + + G+ I + S + + + I +
Sbjct: 529 AVLSNPSILLLDEVTGALD-FEAEKAVQEALDILMLGRSTIIIARRLS--LIRNADYIAV 585
Query: 238 MAEGNLLFHGTQD 250
M EG L+ GT D
Sbjct: 586 MEEGQLVEMGTHD 598
>01_06_0365 +
28767538-28767696,28768299-28768520,28768630-28768868,
28769499-28770024,28770115-28770388,28770495-28771134,
28771220-28771448,28771682-28771948,28772031-28772294,
28772700-28773344
Length = 1154
Score = 55.6 bits (128), Expect = 5e-08
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 24/220 (10%)
Query: 46 AKPKTVIIDNACIR--EGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDL 103
A+P+ +I+D C++ G AI+G SG+GK+T ++SL + P +G V I+G N++ L
Sbjct: 267 ARPEQLILDGLCLQVPNGTTMAIVGQSGSGKST-IISLVERFYDPQDGEVLIDGINIKTL 325
Query: 104 TGAEIVPQFDVFTDSLTVMEQLVFMTEMK------LGNSTKQPNK---SILNTVIEEFKL 154
I + SL E L+FMT +K N+T + K + N KL
Sbjct: 326 KLHWIRGKM-----SLVSQEPLLFMTSIKDNITYGKENATDEEIKRAAELANAANFIDKL 380
Query: 155 SAHVET----XXXXXXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKL 210
+T A + L NP++L+ DE T+ LD + V L ++
Sbjct: 381 PNAYDTMVGQHGAQLSGGQKQRIAIARAILKNPKVLLLDEATSALDVESERLVQEALNRV 440
Query: 211 SASGKIVICSVHQPSCDIFKEFNSILLMAEGNLLFHGTQD 250
G+ + H+ S K + I ++ +G ++ G+ D
Sbjct: 441 MI-GRTTLIVAHRLS--TIKNADCIAVVHQGKIVDQGSHD 477
Score = 34.3 bits (75), Expect = 0.13
Identities = 42/203 (20%), Positives = 89/203 (43%), Gaps = 13/203 (6%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTD 117
I G+ A++G SG+GK+T +++L + P GT++++ +++L + + Q + +
Sbjct: 936 IPSGKTVALVGESGSGKST-VIALLERFYDPHSGTISLDRVELKNLKLSWLRDQMGLVSQ 994
Query: 118 SLTVMEQLVF--MTEMKLGNSTKQPNKSILN-TVIEEFKLS------AHVETXXXXXXXX 168
+ + + + G T++ ++ + EF S V
Sbjct: 995 EPILFNDTIHANIAYGRKGQVTEEEIIAVAKASNAHEFISSLPQGYNTTVGERGTQLSGG 1054
Query: 169 XXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDI 228
A + L +P+IL+ DE T+ LD+ + V L ++ S + I H+ S
Sbjct: 1055 QKQRIAIARAILKDPKILLLDEATSALDAESERIVQDALDQVMVS-RTTIVVAHRLS--T 1111
Query: 229 FKEFNSILLMAEGNLLFHGTQDA 251
K + I ++ +G++ G D+
Sbjct: 1112 IKGADVIAVIKDGSIAEKGQHDS 1134
>06_01_0421 -
3000486-3000595,3000909-3001148,3001659-3001722,
3001969-3002274,3002365-3002579,3003047-3003341,
3003487-3003651,3003745-3004341,3004855-3004941,
3005022-3005342,3006218-3008242
Length = 1474
Score = 54.0 bits (124), Expect = 1e-07
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 17/227 (7%)
Query: 42 WRKVAKPKTVIIDNACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVR 101
W + T+ N ++ GE AI G G+GK+T L S+ G+ EGT+ + G+
Sbjct: 626 WDENPSKHTLRNINLVVKSGEKVAICGEVGSGKSTLLASVLGEVPKT-EGTIQVCGK--- 681
Query: 102 DLTGAEIVPQFDVFTDSLTVMEQLVFMTEMKLGNSTKQPNKSILNTVIEEFKL--SAHVE 159
V Q + + + TV E ++F + M + K L + S +
Sbjct: 682 ----IAYVSQ-NAWIQTGTVQENILFGSLMDEQRYKETLEKCSLEKDLAMLPHGDSTQIG 736
Query: 160 TXXXXXXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVIC 219
A + N I + D+P + +D++ AS + + S K V+
Sbjct: 737 ERGVNLSGGQKQRVQLARALYQNADIYLLDDPFSAVDAHTASSLFNEYVMGALSDKTVLL 796
Query: 220 SVHQPSCDIFKEFNSILLMAEGNLL----FHGTQDACKSFFESIDLH 262
HQ D F+SILLM++G ++ + + C+ F + ++ H
Sbjct: 797 VTHQ--VDFLPVFDSILLMSDGKIIRSAPYQDLLEYCQEFQDLVNAH 841
>09_03_0029 +
11724581-11724583,11726413-11726610,11726874-11727038,
11727217-11727283,11727645-11727812,11728070-11728194,
11728288-11728446,11728552-11728714,11728795-11728920,
11729000-11729083,11729161-11729528,11729613-11729813,
11729909-11730018,11730113-11730197,11730360-11730488,
11730580-11730667,11730805-11730893,11730968-11731267
Length = 875
Score = 53.2 bits (122), Expect = 3e-07
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 23/210 (10%)
Query: 11 VTIQVLLDEFENKDAIIVRNLKVWTPEEKSIWRKVAKPKTVIIDNACIREGEFAAIIGPS 70
V Q+L+ N+ AII NLK P K+A + + +G+ ++GP+
Sbjct: 545 VVEQLLVGRNANQ-AIICHNLKKIYPGRDGNPDKLAVRGLSL----AVPKGQCFGMLGPN 599
Query: 71 GAGKTTFLVSLAGKCTLPFEGTVTINGRNVR-DL----TGAEIVPQFDVFTDSLTVMEQL 125
GAGKT+F+ + G P GT ++G ++ D+ T + PQ D+ + LT E L
Sbjct: 600 GAGKTSFISMMIG-LVKPTSGTSYVHGMDINMDMDHIYTNMGVCPQHDLLWEPLTGKEHL 658
Query: 126 VFMTEMKLGNSTKQPNKSILNTVIEEFKLSAHV------ETXXXXXXXXXXXXXXXATSF 179
F + K ++L +E+ S ++ + A S
Sbjct: 659 FFYGRL------KNLKGAVLVKAVEDALKSVNLFHGGVGDKQVGKYSGGMKRRLSVAISL 712
Query: 180 LSNPQILICDEPTTGLDSYNASQVIGILKK 209
+ +P+++ DEP+TGLD + + + ++K+
Sbjct: 713 IGDPKVVFMDEPSTGLDPASRNNLWNVVKE 742
>03_02_0569 - 9528027-9529256,9530019-9530260,9530374-9531161,
9531613-9531953,9532090-9532310,9532392-9532702,
9532779-9533038,9533691-9533891,9533992-9534167,
9534242-9534296,9535739-9536146
Length = 1410
Score = 53.2 bits (122), Expect = 3e-07
Identities = 50/217 (23%), Positives = 98/217 (45%), Gaps = 15/217 (6%)
Query: 46 AKPKTVIIDNACIRE--GEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGR----- 98
A+P+ +++ N ++ G+ A++G SG+GK+T ++SL + P G V ++GR
Sbjct: 1172 ARPEILVLSNFNLKVSGGQTVAVVGVSGSGKST-IISLIERFYDPVTGQVLLDGRDIKSF 1230
Query: 99 NVRDLTGAEIVPQFDVFTDSLTVMEQLVF----MTEMKLGNSTKQPNKSILNTVIEEFKL 154
N+R L + Q + S T+ E +++ TE ++ + + N + +
Sbjct: 1231 NLRWLRSHMGLIQQEPVIFSTTIRENIIYARHNATEAEMKEAARIANAHHFISSLPH-GY 1289
Query: 155 SAHVETXXXXXXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASG 214
HV A L N IL+ DE ++ ++S ++ V L L
Sbjct: 1290 DTHVGMRGVDLTAGQKQRIAIARVVLKNAPILLLDEASSAIESESSRVVQEALDTLVMGN 1349
Query: 215 KIVICSVHQPSCDIFKEFNSILLMAEGNLLFHGTQDA 251
K I H+ + + K ++I+++ G ++ GT D+
Sbjct: 1350 KTTILIAHRAA--MMKHVDNIVVLNGGRIVEQGTHDS 1384
Score = 47.2 bits (107), Expect = 2e-05
Identities = 45/193 (23%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 65 AIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTD-----SL 119
A++G +G+GK++ ++ L + P G V ++G N+++L + Q + T SL
Sbjct: 446 ALVGRNGSGKSS-IIPLMERFYDPTLGEVLLDGENIKNLKVEWLRSQIGLVTQEPALLSL 504
Query: 120 TVMEQLVFMTEMKLGNSTKQPNKSILNTVIEEFK--LSAHVETXXXXXXXXXXXXXXXAT 177
++ E + + + + + I + V A
Sbjct: 505 SIRENIAYGRSATFDQIEEAAKTAHAHGFISSLEKGYETQVGRAGMALSDEQKIKISIAR 564
Query: 178 SFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIFKEFNSILL 237
+ LSNP IL+ DE T GLD + A + + + G+ I + S + K + I +
Sbjct: 565 AVLSNPSILLLDEVTGGLD-FEAEKAVQEALDVLMLGRSTIIIARRLS--LIKNADYIAV 621
Query: 238 MAEGNLLFHGTQD 250
M EG+L+ GT D
Sbjct: 622 MEEGHLVEMGTHD 634
>11_01_0346 -
2589111-2589220,2589613-2589852,2589956-2590028,
2590301-2590606,2590698-2590912,2591461-2591755,
2591901-2592065,2592142-2592738,2593029-2593115,
2593203-2593523,2594047-2596071
Length = 1477
Score = 51.2 bits (117), Expect = 1e-06
Identities = 50/230 (21%), Positives = 98/230 (42%), Gaps = 23/230 (10%)
Query: 42 WRKVAKPKTVIIDNACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVR 101
W + +T+ N ++ GE AI G G+GK+T L ++ G+ EGT+ + GR
Sbjct: 626 WDENPSKQTLRNINLAVKVGEKVAICGEVGSGKSTLLAAVLGEVPKT-EGTIQVCGR--- 681
Query: 102 DLTGAEIVPQFDVFTDSLTVMEQLVFMTEMKLGNSTKQPNKSILNTVIEEFKLSAH---- 157
V Q + + + TV + ++F + M + + + ++ ++ + H
Sbjct: 682 ----IAYVSQ-NAWIQTGTVQDNILFGSSM---DKQRYKETLVRCSLEKDLAMLTHGDCT 733
Query: 158 -VETXXXXXXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKI 216
+ A + N I + D+P + +D++ AS + + S K
Sbjct: 734 QIGERGVNLSGGQKQRVQLARALYQNADIYLLDDPFSAVDAHTASSLFNEYVMGALSDKT 793
Query: 217 VICSVHQPSCDIFKEFNSILLMAEGNLL----FHGTQDACKSFFESIDLH 262
V+ HQ D F+SILLM++G ++ + C+ F + ++ H
Sbjct: 794 VLLVTHQ--VDFLPVFDSILLMSDGEIIQSAPYQDLLACCEEFQDLVNAH 841
>06_01_0193 -
1491710-1491739,1492194-1492319,1492631-1492766,
1493048-1493112,1493213-1493305,1493433-1493498,
1493763-1493843,1493977-1494032,1494692-1494780,
1495340-1495425,1495531-1495647,1496109-1496254,
1496665-1496725,1496831-1496914,1497028-1497135,
1497286-1497388,1497802-1497845,1498100-1498584,
1499417-1499603,1500150-1500362,1501066-1501323
Length = 877
Score = 50.8 bits (116), Expect = 1e-06
Identities = 50/200 (25%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 61 GEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAE------IVPQFDV 114
G+ AI+G SG+GK+T L L + G++ I+G+++R++T +VPQ V
Sbjct: 649 GKSVAIVGTSGSGKSTIL-RLLFRFFDSSSGSIRIDGQDIREVTLDSLRKCIGVVPQDTV 707
Query: 115 -FTDSL--TVMEQLVFMTEMKLGNSTKQPNKSILNTVIE-EFKLSAHVETXXXXXXXXXX 170
F D++ + + T+ ++ + ++ +I +T++ K + V
Sbjct: 708 LFNDTIKHNIQYGRLSATDEEVYDVARRA--AIHDTIMNFPDKYNTVVGERGLKLSGGEK 765
Query: 171 XXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIFK 230
A FL P IL+CDE T+ LDS + ++ LK LS + I H+ + +
Sbjct: 766 QRVSIARVFLKEPSILLCDEATSALDSTTEASILNSLKTLSVD-RTSIFIAHRLTTAM-- 822
Query: 231 EFNSILLMAEGNLLFHGTQD 250
+ + I+++ G ++ G D
Sbjct: 823 QCDEIIVLENGEVVEQGPHD 842
>06_03_0611 -
22721977-22722276,22722765-22722853,22722978-22723083,
22723178-22723306,22723803-22723887,22723994-22724103,
22724424-22724624,22725033-22725394,22725612-22725695,
22725791-22725916,22725999-22726161,22726378-22726536,
22727147-22727274,22727371-22727493,22727755-22727899,
22727992-22728068,22728318-22728696,22729325-22729411
Length = 950
Score = 50.4 bits (115), Expect = 2e-06
Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 20/199 (10%)
Query: 61 GEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVR-DL----TGAEIVPQFDVF 115
GE I+GP+GAGK++F+ + G T P G + +++ D+ + PQ D+
Sbjct: 659 GECLGILGPNGAGKSSFISMMIG-LTRPTSGNAFVREFSIQTDMEKIYNSMGVCPQNDML 717
Query: 116 TDSLTVMEQLVFMTEMKLGNSTKQPNKSILNTVIEEFKLSAHV------ETXXXXXXXXX 169
+ LT E L F + K N S L+T + E S ++ +
Sbjct: 718 WEMLTGREHLQFYGRL------KSLNGSDLDTAVNESLRSVNLLHGGAPDKQVRKYSGGM 771
Query: 170 XXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIF 229
A S + + +++ DEP+TGLD + + +K+ IV+ + ++
Sbjct: 772 KRRLSVAISLIGDAKVVYMDEPSTGLDPASRKSLWDAVKQAKRDRAIVLTTHSMEEAEVL 831
Query: 230 KEFNSILLMAEGNLLFHGT 248
+ + +M +G+L GT
Sbjct: 832 --CDRLCIMVDGSLQCIGT 848
>03_06_0004 +
30936670-30936726,30936858-30936905,30937045-30937080,
30937184-30937258,30937568-30937692,30937770-30937779,
30938125-30938296,30938547-30938665,30938868-30938978,
30939053-30939197,30939340-30939472,30939545-30939620,
30940141-30940206,30940308-30940415,30940750-30940857,
30940948-30941145,30941343-30941591
Length = 611
Score = 48.8 bits (111), Expect = 6e-06
Identities = 50/219 (22%), Positives = 100/219 (45%), Gaps = 21/219 (9%)
Query: 46 AKPKTVIIDNACIR--EGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDL 103
++P +I+ ++ G A++GPSG GKTT + +L + P +G + +NG + ++
Sbjct: 361 SRPSHMILKGITLKLTPGSKVALVGPSGGGKTT-IANLIERFYDPLKGRILLNGVPLPEI 419
Query: 104 TG------AEIVPQFDVFTDSLTVMEQLVFMTEMKLG-----NSTKQPNK-SILNTVIEE 151
+ IV Q V + ++ E + + E K N+ K N + + + ++
Sbjct: 420 SHQFLHRKVSIVSQEPVLFNC-SIEENIAYGLEGKASSADVENAAKMANAHNFICSFPDQ 478
Query: 152 FKLSAHVETXXXXXXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLS 211
+K V A + L NP++L+ DE T+ LD+ + V + L
Sbjct: 479 YKTV--VGERGIRLSGGQKQRVAIARALLMNPRVLLLDEATSALDAESEYLVQDAMDSL- 535
Query: 212 ASGKIVICSVHQPSCDIFKEFNSILLMAEGNLLFHGTQD 250
G+ V+ H+ S K +++ ++++G ++ GT D
Sbjct: 536 MKGRTVLVIAHRLS--TVKSADTVAVISDGQIVESGTHD 572
>02_05_0385 -
28506326-28506891,28506993-28507405,28507496-28507743,
28507820-28508480,28508572-28509498,28509588-28509847,
28509943-28510143,28515547-28515633,28516200-28516375,
28516465-28516519,28516623-28516910
Length = 1293
Score = 48.4 bits (110), Expect = 7e-06
Identities = 46/215 (21%), Positives = 92/215 (42%), Gaps = 14/215 (6%)
Query: 46 AKPKTVIIDNACIR--EGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDL 103
++P VI+D + G+ A++G SG+GK+T +VSL + P G V ++G +++DL
Sbjct: 416 SRPDVVILDRFSLDFPAGKIVALVGGSGSGKST-VVSLIERFYEPLTGAVLLDGHDIKDL 474
Query: 104 TGAEIVPQFDVFTD-----SLTVMEQLVF-MTEMKLGNSTKQPNKSILNTVIEEF--KLS 155
+ Q + + ++ E +++ + + S T I +
Sbjct: 475 DVKWLRQQIGLVNQEPALFATSIRENILYGKGDASMDEINHAAKLSEAITFINHLPDRYE 534
Query: 156 AHVETXXXXXXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGK 215
V + + L NP IL+ DE T+ LD+ + V L ++ G+
Sbjct: 535 TQVGERGIQLSGGQKQRIAISRAILKNPSILLLDEATSALDAESEKSVQEALDRVMV-GR 593
Query: 216 IVICSVHQPSCDIFKEFNSILLMAEGNLLFHGTQD 250
+ H+ S + ++I ++ G ++ GT +
Sbjct: 594 TTVVIAHRLS--TIRNADTIAVVDSGRIVETGTHE 626
Score = 41.5 bits (93), Expect = 8e-04
Identities = 47/218 (21%), Positives = 101/218 (46%), Gaps = 18/218 (8%)
Query: 42 WRKVAKPKTVIID--NACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRN 99
+R A+P+ V+ + ++ G+ A++G SG+GK+T L SL + P G V I+G++
Sbjct: 1050 FRYPARPEVVVFKGLDLLMKAGKSMALVGMSGSGKSTVL-SLILRFYDPIAGKVLIDGKD 1108
Query: 100 VRDLTGAEI-----VPQFDVFTDSLTVMEQLVF----MTEMKLGNSTKQPN-KSILNTVI 149
+R + + + Q + + T+ + +++ TE ++ ++ K N S ++ +
Sbjct: 1109 IRKVKLKSLRKHIGLVQQEPALFATTIYDNILYGKDGATEAEVVDAAKLANAHSFISALP 1168
Query: 150 EEFKLSAHVETXXXXXXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKK 209
E ++ V A + + +P IL+ DE T+ LD + V L +
Sbjct: 1169 EGYR--TRVGERGVQLSGGQRQRIAIARAIVKDPAILLLDEATSALDVESERVVQQALDR 1226
Query: 210 LSASGKIVICSVHQPSCDIFKEFNSILLMAEGNLLFHG 247
+ + + + H+ S K + I ++ +G ++ G
Sbjct: 1227 VMRN-RTTVMVAHRLS--TIKNADVISVLQDGKIIEQG 1261
>08_01_0345 +
3055522-3055827,3055968-3056022,3056744-3056919,
3057104-3057232,3057313-3057572,3057688-3058001,
3058268-3058491,3058862-3059214,3059489-3059916,
3060031-3061514
Length = 1242
Score = 46.8 bits (106), Expect = 2e-05
Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 16/203 (7%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTD 117
I G+ A++G SG GK+T ++SL + P G + I+G+N+++L + +
Sbjct: 382 IPAGKVVALVGSSGCGKST-VISLVQRFYDPISGNILIDGQNIKELDLKSLRRSIGSVSQ 440
Query: 118 -----SLTVMEQL----VFMTEMKLGNSTKQPN-KSILNTVIEEFKLSAHVETXXXXXXX 167
S T+M+ L + T+ ++ K N S ++ + ++ S V
Sbjct: 441 EPSLFSGTIMDNLRIGKMDGTDEEIIEIAKSANVHSFVSKLPNQY--STEVGERGVQLSG 498
Query: 168 XXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCD 227
A + L +P IL+ DE T+ LDS + V L + G+ VI H+ S
Sbjct: 499 GQKQRIAIARAMLKDPPILLLDEATSALDSESEKLVQEALDG-AMKGRTVILIAHRMSTI 557
Query: 228 IFKEFNSILLMAEGNLLFHGTQD 250
I + I+++ G + GT +
Sbjct: 558 I--NSDKIVVVENGKVAQSGTHE 578
Score = 45.2 bits (102), Expect = 7e-05
Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 17/175 (9%)
Query: 46 AKPKTVIID--NACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDL 103
++ +I+D + I G+ A++GPSGAGK+T +VSL + P G V ++G++VR+
Sbjct: 1000 SRQDVIILDGFSLAIEPGQRVALVGPSGAGKST-IVSLLLRFYDPCRGQVLVDGKDVREY 1058
Query: 104 TGAEIVPQFDVFTD-----SLTVMEQLVFMTEMKLGNSTKQPNKSILNTVIEEF--KLSA 156
+ Q + +L++ E + + E G S + ++ + I EF LS
Sbjct: 1059 NLRFLRKQIGLVQQEPILFNLSIRENISYGNE---GASETEIVEAAMEANIHEFISGLSN 1115
Query: 157 HVET----XXXXXXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGIL 207
+T A + L P IL+ DE T+ LD V+ L
Sbjct: 1116 GYDTVVGDKGSQLSGGQKQRIAIARTILKRPVILLLDEATSALDGETEKVVMSSL 1170
>08_01_0344 +
3043824-3044123,3044260-3044314,3044810-3044985,
3045083-3045283,3045383-3045642,3045909-3046222,
3046399-3046622,3047046-3047398,3047709-3047826,
3047875-3048133,3048252-3049729
Length = 1245
Score = 46.4 bits (105), Expect = 3e-05
Identities = 59/251 (23%), Positives = 110/251 (43%), Gaps = 22/251 (8%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVR--DLTG-----AEIVP 110
I G+ A++G SG GK+T ++SL + P G++ I+G +++ DL A +
Sbjct: 404 IPAGKVVALVGSSGCGKST-VISLLQRFYDPTSGSILIDGHSIKKLDLESLRRNIASVSQ 462
Query: 111 QFDVFTDSLTVMEQL-VFMTEMKLGNSTKQPNKSILNTVIEEF--KLSAHVETXXXXXXX 167
+ +F S T+ + L + + TK + +++ I + + V
Sbjct: 463 EPSLF--SGTIKDNLRIGKMDANDDEITKAARTANVHSFISKLPNEYLTEVGERGVQLSG 520
Query: 168 XXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCD 227
A + L +P IL+ DE T+ LDS + V L+K + SG+ VI H+ S
Sbjct: 521 GQKQRIAIARAMLKDPPILLLDEATSALDSESEKLVQDALEK-AMSGRTVILIAHRMSTI 579
Query: 228 IFKEFNSILLMAEGNLLFHGTQDAC---KSFFESIDLHCPLNYNPAEFYIRAVSNHNGVC 284
+ ++I+++ G + GT +F+ ++ C + E R S+ + V
Sbjct: 580 V--NADTIVVVENGKVAQTGTHQELIEKSTFYSNV---CSMQNIEKEAGTRVASSSDNVI 634
Query: 285 IKKMLENYQDQ 295
++ E Y Q
Sbjct: 635 EDEIDEVYDRQ 645
Score = 39.9 bits (89), Expect = 0.003
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 46 AKPKTVIID--NACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRD 102
++P+ I+D + I G+ A++GPSGAGK++ L L + P G V I+ +N++D
Sbjct: 1005 SRPEVTILDGFSLVIEPGQRVALVGPSGAGKSSVLALLL-RFYDPQRGRVLIDNKNIKD 1062
>04_04_1331 - 32706043-32707248,32707411-32707652,32707737-32708562,
32708640-32708863,32708946-32709262,32709381-32709443,
32709465-32709640,32710609-32710985,32711416-32711470,
32711614-32711913
Length = 1261
Score = 46.0 bits (104), Expect = 4e-05
Identities = 46/204 (22%), Positives = 96/204 (47%), Gaps = 16/204 (7%)
Query: 55 NACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEI-----V 109
N I+ G A++G SG+GK+T +++L + P G VTI+G+++R L + +
Sbjct: 1042 NLKIQAGRSQALVGASGSGKST-VIALIERFYDPTGGKVTIDGKDIRRLNLKALRLKIGL 1100
Query: 110 PQFDVFTDSLTVMEQLVF----MTEMKLGNSTKQPN-KSILNTVIEEFKLSAHVETXXXX 164
Q + + +++E + + TE ++ + K N ++ + +K + V
Sbjct: 1101 VQQEPVLFAASILENIAYGKDGATEEEVIQAAKTANVHGFVSQLPNGYKTA--VGERGVQ 1158
Query: 165 XXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQP 224
A + L +P IL+ DE T+ LD+ + + L++L G+ + H+
Sbjct: 1159 LSGGQKQRIAIARAVLKDPAILLLDEATSALDAESECVLQEALERL-MKGRTTVLVAHRL 1217
Query: 225 SCDIFKEFNSILLMAEGNLLFHGT 248
S + + I ++ +G ++ HG+
Sbjct: 1218 S--TIRGVDRIAVVQDGRIVEHGS 1239
Score = 43.2 bits (97), Expect = 3e-04
Identities = 46/197 (23%), Positives = 91/197 (46%), Gaps = 18/197 (9%)
Query: 65 AIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTD-----SL 119
A++G SG+GK+T +V+L + P EG V ++ +++ L + Q + +
Sbjct: 405 AVVGGSGSGKST-VVALIERFYDPNEGQVLLDNVDIKTLQLRWLRDQIGLVNQEPALFAT 463
Query: 120 TVMEQLVF------MTEMKLGNSTKQPNKSILNTVIEEFKLSAHVETXXXXXXXXXXXXX 173
T+ E +++ M E++ +T S ++T+ + + V
Sbjct: 464 TIHENILYGKPDATMAEVEAA-ATASNAHSFISTLPNGY--NTMVGERGIQLSGGQKQRI 520
Query: 174 XXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIFKEFN 233
A + L NP+IL+ DE T+ LD+ + + V L +L +G+ + H+ S + N
Sbjct: 521 AIARAMLKNPKILLLDEATSALDAGSENIVQEALDRL-MTGRTTVVVAHRLS--TIRNVN 577
Query: 234 SILLMAEGNLLFHGTQD 250
I ++ +G ++ GT D
Sbjct: 578 MIAVIQQGQVVETGTHD 594
>01_06_0555 -
30182818-30183169,30183268-30183674,30183804-30184773,
30184829-30184902,30184941-30185084,30185186-30185365,
30185448-30185988,30186081-30186538,30187723-30187901,
30187998-30188052,30188217-30188468
Length = 1203
Score = 46.0 bits (104), Expect = 4e-05
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 19/213 (8%)
Query: 50 TVIID-NACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEI 108
TV+ D N I G+ A++G SG+GK+T ++L + EGTV ++G N+++L I
Sbjct: 380 TVLKDFNLQIPAGQTVALVGSSGSGKST-AIALVQRFYDATEGTVKVDGVNIKELQLKWI 438
Query: 109 VPQFDVFTD-----SLTVMEQLVF------MTEMKLGNSTKQPNKSILNTVIEEFKLSAH 157
+ + + ++ E ++F M E+ T + + + + EE++
Sbjct: 439 RSKMGLVSQDHALFGTSIKENILFGKPDATMDELYAAAMTANAH-NFIRGLPEEYE--TK 495
Query: 158 VETXXXXXXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIV 217
+ A + + NP IL+ DE T+ LDS + V L + S G+
Sbjct: 496 IGERGALLSGGQKQRIAIARAVIKNPAILLLDEATSALDSESEKLVQHALDQAS-MGRTT 554
Query: 218 ICSVHQPSCDIFKEFNSILLMAEGNLLFHGTQD 250
+ H+ S K + I ++ G + GT D
Sbjct: 555 LVVAHKLS--TVKNADQIAVVDGGTIAEIGTHD 585
Score = 41.9 bits (94), Expect = 6e-04
Identities = 46/212 (21%), Positives = 88/212 (41%), Gaps = 14/212 (6%)
Query: 47 KPKTVIIDNAC--IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLT 104
+P+ +I+ + ++ G ++G SG GK+T ++ L + G V ++G +VR++
Sbjct: 977 RPQCLILQDFSLDVKAGTSIGLVGRSGCGKST-IIGLIQRFYDVDRGAVKVDGMDVREMD 1035
Query: 105 -----GAEIVPQFDVFTDSLTVMEQLVF-MTEMKLGNSTKQPNKSILNTVIEEFKLSAHV 158
G + + S +V + + F E + + + I K H
Sbjct: 1036 ILWYRGFTALVSQEPAIFSGSVRDNIAFGKPEADEDEIVEAAKAANAHEFISSLKDGYHT 1095
Query: 159 ETXXXXXXXXXXXXX--XXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKI 216
+ A + + NP IL+ DE T+ LD+ + V L ++ SG+
Sbjct: 1096 DCGEHGLQLSGGQKQRIAIARAIIRNPAILLLDEATSALDAQSEQVVQEALDRI-MSGRT 1154
Query: 217 VICSVHQPSCDIFKEFNSILLMAEGNLLFHGT 248
I H+ + K +SI + EG ++ GT
Sbjct: 1155 TIVVAHR--LNTIKNVDSIAFLGEGKVVERGT 1184
>02_01_0668 - 4969141-4970520,4970597-4971463
Length = 748
Score = 45.6 bits (103), Expect = 5e-05
Identities = 44/200 (22%), Positives = 92/200 (46%), Gaps = 14/200 (7%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTD 117
I+ G+ AI+G SG+GK+T ++ L + P G+V I+GR+++ + + +
Sbjct: 525 IQPGKSTAIVGKSGSGKST-IIGLIERFYDPIRGSVKIDGRDIKAYNLRYLRRHIGLVSQ 583
Query: 118 -----SLTVMEQLVF----MTEMKLGNSTKQPNKSILNTVIEEFKLSAHVETXXXXXXXX 168
+ T+ E +V+ +E+++ ++ + N + +++
Sbjct: 584 EPTLFAGTIRENIVYGIDIASEVEIEDAARSANAHDFISNLKD-GYDTLCGERGVQLSGG 642
Query: 169 XXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDI 228
A + L NP IL+ DE T+ LDS + V L ++ G+ + H+ S I
Sbjct: 643 QKQRIAIARAILKNPAILLLDEATSALDSQSEKVVQEALDRVMV-GRTSVVVAHRLS--I 699
Query: 229 FKEFNSILLMAEGNLLFHGT 248
++ + I ++ +G ++ GT
Sbjct: 700 IQKCDLITMLEKGTIVEKGT 719
Score = 32.7 bits (71), Expect = 0.39
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 176 ATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIFKEFNSI 235
A + L +P+IL+ DE T+ LD+ + +++ +++ G+ I H+ S + + I
Sbjct: 12 ARAILKSPKILLLDEATSALDT-ESERIVQEALDMASMGRTTIIIAHRLS--TIRNADII 68
Query: 236 LLMAEGNLLFHGTQD 250
++M G ++ G D
Sbjct: 69 VVMQSGEVMELGPHD 83
>04_04_0118 - 22889608-22890816,22891990-22892261,22892306-22893131,
22893311-22893534,22893620-22893936,22894035-22894294,
22894723-22894923,22895015-22895190,22895445-22895718
Length = 1252
Score = 44.8 bits (101), Expect = 9e-05
Identities = 44/201 (21%), Positives = 94/201 (46%), Gaps = 16/201 (7%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEI-----VPQF 112
IR G+ A++G SG+GK+T +++L + P G V I+G+++R L + + Q
Sbjct: 1035 IRAGQSQALVGASGSGKST-VIALIERFYDPLAGKVMIDGKDIRRLNVRSLRLKIGLVQQ 1093
Query: 113 DVFTDSLTVMEQLVF----MTEMKLGNSTKQPN-KSILNTVIEEFKLSAHVETXXXXXXX 167
+ + ++ E + + TE ++ + K N ++ + E +K V
Sbjct: 1094 EPVLFATSIFENIAYGKDGATEEEVIEAAKVANMHGFVSALPEGYK--TPVGERGVQLSG 1151
Query: 168 XXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCD 227
A + L +P +L+ DE T+ LD+ + + L+++ G+ + H+ S
Sbjct: 1152 GQKQRIAIARAVLKDPAVLLLDEATSALDAESECVLQEALERI-MKGRTAVLVAHRLS-- 1208
Query: 228 IFKEFNSILLMAEGNLLFHGT 248
+ +SI ++ +G ++ G+
Sbjct: 1209 TIRGVDSIAVVQDGRVVEQGS 1229
Score = 40.3 bits (90), Expect = 0.002
Identities = 44/201 (21%), Positives = 91/201 (45%), Gaps = 18/201 (8%)
Query: 61 GEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTD--- 117
G+ AA++G SG+GK+T +V+L + P +G V ++ +++ L + Q +
Sbjct: 381 GKTAAVVGGSGSGKST-VVALIERFYDPNQGQVLLDNVDIKTLQLKWLRDQIGLVNQEPA 439
Query: 118 --SLTVMEQLVF------MTEMKLGNSTKQPNKSILNTVIEEFKLSAHVETXXXXXXXXX 169
+ T++E +++ M E++ ++ + I + + V
Sbjct: 440 LFATTILENILYGKPDATMAEVEAAATSANAHSFI---ALLPNGYNTQVGERGLQLSGGQ 496
Query: 170 XXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIF 229
A + L NP+IL+ DE T+ LD+ + + V L +L G+ + H+ S
Sbjct: 497 KQRIAIARAMLKNPKILLLDEATSALDAGSENIVQEALDRLMV-GRTTVVVAHRLS--TI 553
Query: 230 KEFNSILLMAEGNLLFHGTQD 250
+ + I ++ +G ++ GT D
Sbjct: 554 RCVDMIAVIQQGQVVETGTHD 574
>03_04_0206 - 18493178-18495310
Length = 710
Score = 44.0 bits (99), Expect = 2e-04
Identities = 47/162 (29%), Positives = 69/162 (42%), Gaps = 13/162 (8%)
Query: 61 GEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTDSLT 120
G AI+GP+GAGK+T L LAG T P +G VR I F D LT
Sbjct: 510 GTRVAIVGPNGAGKSTLLNLLAGDLT-PTKG-------EVRRSQKLRIGRYSQHFVDLLT 561
Query: 121 VMEQLVFMTEMKLGNSTKQPNKS-ILNTVIEEFKLSAHVETXXXXXXXXXXXXXXXATSF 179
ME+ ++L + +K+ + + +F L H TS
Sbjct: 562 -MEENAVQYLLRLHPDQEGMSKAEAVRAKLGKFGLPGHNHLTPIVKLSGGQKARVVFTSI 620
Query: 180 -LSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICS 220
+S+P IL+ DEPT LD + + L + +G +V+ S
Sbjct: 621 SMSHPHILLLDEPTNHLDMQSIDALADALDEF--TGGVVLVS 660
>05_07_0004 +
26990250-26990516,26990877-26990931,26991286-26991461,
26991702-26991923,26992001-26992239,26992437-26992962,
26993042-26993315,26993391-26994009,26994082-26994121,
26994263-26994310,26994548-26994814,26994892-26995155,
26995260-26995904
Length = 1213
Score = 43.6 bits (98), Expect = 2e-04
Identities = 56/247 (22%), Positives = 105/247 (42%), Gaps = 24/247 (9%)
Query: 19 EFENKDAIIVRNLKVWTPEEKSIWRKVAKPKTVIID--NACIREGEFAAIIGPSGAGKTT 76
++++ I++ ++K + + ++ + +I D + C+ G AI+G SG+GK+T
Sbjct: 353 DYDDTSGIVLEDIKGDIELKDVFFSYPSRSEQLIFDGFSMCVSNGTTMAIVGESGSGKST 412
Query: 77 FLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTDSLTVMEQLVFMTEMK---- 132
+++L + P G V I+G N++ L I + L E ++FMT +K
Sbjct: 413 -VINLVERFYDPQAGEVLIDGMNIKSLRLEWIRGKI-----GLVNQEPILFMTSIKDNIL 466
Query: 133 --LGNSTKQPNK---SILNTV--IEEFK--LSAHVETXXXXXXXXXXXXXXXATSFLSNP 183
N+T + K + N IE V A + L NP
Sbjct: 467 YGKENATLEEIKRAAELANAARFIESMPNGYDTLVGQRGAQLSGGQKQRIAIARAILKNP 526
Query: 184 QILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIFKEFNSILLMAEGNL 243
+IL+ DE T+ LD + V L ++ G+ + H+ S + + I ++ +G +
Sbjct: 527 KILLLDEATSALDLESERIVQDALNQIMV-GRTTLVVAHRLS--TVRNAHCISVVHKGKI 583
Query: 244 LFHGTQD 250
G D
Sbjct: 584 AEQGHHD 590
Score = 33.9 bits (74), Expect = 0.17
Identities = 41/205 (20%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTD 117
I G+ A++G SG+GK+T ++L + P G + ++G ++ L + + Q + +
Sbjct: 995 IPSGKTVALVGQSGSGKST-AIALLERFYDPDSGVILLDGVEIKKLEISWLRDQMGLVSQ 1053
Query: 118 -----SLTVMEQLVF-----MTEMKLGNSTKQPN-KSILNTVIEEFKLSAHVETXXXXXX 166
+ T+ + + +TE ++ + K N ++++ E + S V
Sbjct: 1054 EPVLFNDTIRANIAYGKNEEVTEEEIVAAAKAANAHEFISSMPEGY--STSVGERGTQLS 1111
Query: 167 XXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSC 226
A + + +P+IL+ DE T+ LD+ + V L + G+ + H+ S
Sbjct: 1112 GGQKQRIAIARAIVKDPRILLLDEATSALDAESERIVQDALDHVMV-GRTTVVVAHRLS- 1169
Query: 227 DIFKEFNSILLMAEGNLLFHGTQDA 251
+ + I ++ +G ++ G +A
Sbjct: 1170 -TIQGADIIAVLKDGAIVEKGRHEA 1193
>11_04_0359 +
16735204-16735676,16736597-16736647,16736860-16736934,
16737011-16737062,16737147-16737280,16737397-16737511,
16737665-16737751,16737855-16737903,16738351-16738435,
16738641-16738715,16738848-16739029,16739905-16739969
Length = 480
Score = 43.2 bits (97), Expect = 3e-04
Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 14/176 (7%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTI-------NGRNVRDLTGAE--- 107
++E F + G SG+GKTT L LAG + P GT+ I N +L A+
Sbjct: 196 LKEKSFGLLFGRSGSGKTTLLQLLAG-LSEPTHGTICIQKYNDSGNPMGPPELLTAQRVG 254
Query: 108 IVPQF-DVFTDSLTVMEQLVFMTEMKLGNSTKQPNKSI-LNTVIEEFKLSA-HVETXXXX 164
IV QF + + + TV+E++ F + + + ++ L I L+ +E
Sbjct: 255 IVFQFPERYFLADTVLEEITFGWPRQNTDFLFREKLALKLQNAINSVGLNGISLEEDPQS 314
Query: 165 XXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICS 220
A + P +L+ DEP GLD + V+ +LK L I+ S
Sbjct: 315 LSGGFKRRLALAIQLVQTPDLLLLDEPLAGLDWKARADVVNLLKDLKKDHTILAVS 370
>02_01_0672 - 4989053-4990432,4990523-4991410,4995896-4996436,
4996532-4997168,4997266-4997320,4997439-4997675
Length = 1245
Score = 43.2 bits (97), Expect = 3e-04
Identities = 45/199 (22%), Positives = 85/199 (42%), Gaps = 12/199 (6%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTD 117
I+ G+ A++G SG+GK+T ++ L + P G+V I+GR+++ + + +
Sbjct: 1022 IQPGKSTALVGQSGSGKST-IIGLIERFYDPIRGSVKIDGRDIKAYNLRALRRHIGLVSQ 1080
Query: 118 -----SLTVMEQLVFMTEMKLGNSTKQPNKSI-LNTVIEEFK--LSAHVETXXXXXXXXX 169
+ T+ E +V+ TE + +S + I K
Sbjct: 1081 EPTLFAGTIRENIVYGTETASEAEIEDAARSANAHDFISNLKDGYDTWCGERGVQLSGGQ 1140
Query: 170 XXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIF 229
A + L NP IL+ DE T+ LDS + V L ++ G+ + H+ S
Sbjct: 1141 KQRIAIARAILKNPAILLLDEATSALDSQSEKVVQEALDRVMI-GRTSVVVAHRLS--TI 1197
Query: 230 KEFNSILLMAEGNLLFHGT 248
+ + I ++ +G ++ GT
Sbjct: 1198 QNCDLITVLEKGTVVEKGT 1216
Score = 39.9 bits (89), Expect = 0.003
Identities = 44/204 (21%), Positives = 85/204 (41%), Gaps = 12/204 (5%)
Query: 55 NACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDV 114
N + G A++G SG+GK+T +++L + P G V ++G ++R L + Q +
Sbjct: 381 NLRVPAGRTVALVGGSGSGKST-VIALLERFYDPSAGEVMVDGVDIRRLRLKWLRAQMGL 439
Query: 115 FTD-----SLTVMEQLVFMTEMKLGNSTKQPNKSI-LNTVIEEFK--LSAHVETXXXXXX 166
+ + ++ E ++F E K+ + I + V
Sbjct: 440 VSQEPALFATSIRENILFGKEEATAEEVVAAAKAANAHNFISQLPQGYDTQVGERGVQMS 499
Query: 167 XXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSC 226
A + L +P+IL+ DE T+ LD+ + +V+ L++ G+ I H+ S
Sbjct: 500 GGQKQRIAIARAILKSPKILLLDEATSALDT-ESERVVQEALDLASMGRTTIVIAHRLS- 557
Query: 227 DIFKEFNSILLMAEGNLLFHGTQD 250
+ + I +M G + G D
Sbjct: 558 -TIRNADIIAVMQSGEVKELGPHD 580
>05_07_0003 +
26981956-26982190,26982258-26982318,26982739-26982833,
26983304-26983479,26983738-26983959,26984041-26984279,
26984786-26985311,26985407-26985680,26985759-26986410,
26986508-26986736,26986841-26987107,26987180-26987443,
26987526-26988194
Length = 1302
Score = 41.9 bits (94), Expect = 6e-04
Identities = 53/236 (22%), Positives = 99/236 (41%), Gaps = 16/236 (6%)
Query: 24 DAIIVRNLKVWTPEEKSIWRKVAKPKTVIIDNACIR--EGEFAAIIGPSGAGKTTFLVSL 81
D ++ N+K + ++P +I D + G AI+G SG+GK+T +++L
Sbjct: 381 DGAVLENIKGDIELRNVYFSYPSRPDQLIFDGFSLHVLNGITMAIVGESGSGKST-VINL 439
Query: 82 AGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTD-----SLTVMEQLVF----MTEMK 132
+ P G V I+G N++ L I + + + + ++ E +V+ T +
Sbjct: 440 VERFYDPQAGEVLIDGVNIKTLRLRWIREKIGLVSQEPLLFATSIRENIVYGREDATTEE 499
Query: 133 LGNSTKQPNKSILNTVIEEFKLSAHVETXXXXXXXXXXXXXXXATSFLSNPQILICDEPT 192
+ +T+ N + + L V A + L NP+IL+ DE T
Sbjct: 500 IMAATELANAAKFIENLPN-GLDTMVGEHGAQLSGGQKQRIAIARAILKNPKILLLDEAT 558
Query: 193 TGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIFKEFNSILLMAEGNLLFHGT 248
+ LD + V L ++ K I H+ S K+ + I ++ G ++ GT
Sbjct: 559 SALDMESERVVQEALNRI-MQDKTTIVVAHRLS--TIKDADIISVVQHGRVVEQGT 611
Score = 40.7 bits (91), Expect = 0.001
Identities = 43/191 (22%), Positives = 84/191 (43%), Gaps = 13/191 (6%)
Query: 46 AKPKTVIIDNACIR--EGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDL 103
++P I N +R G+ A++G SG GK+T +++L + P GTVT++G ++++L
Sbjct: 1062 SRPDIQIFRNLSLRIPSGKMVALVGESGCGKST-VIALLERFYDPDSGTVTLDGVDIKNL 1120
Query: 104 TGAEIVPQFDVFTDSLTVMEQLV--FMTEMKLGNSTKQPNKSILNTV-IEEF--KLSAHV 158
+ Q + + + V + K G++T++ + +F L
Sbjct: 1121 KVGFLRQQMGLVSQEPVLFNDTVRANIAYGKEGDATEEEIVAAARAANAHQFISALPGGY 1180
Query: 159 ET----XXXXXXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASG 214
+T A + L +P+IL+ DE T+ LD+ + V L+ + G
Sbjct: 1181 DTCAGERGVQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESERAVQAALESVMV-G 1239
Query: 215 KIVICSVHQPS 225
+ + H+ S
Sbjct: 1240 RTTVVVAHRLS 1250
>02_01_0670 - 4976658-4978037,4978128-4979015,4982590-4983130,
4983209-4983845,4983962-4983992,4984094-4984324
Length = 1235
Score = 41.9 bits (94), Expect = 6e-04
Identities = 44/196 (22%), Positives = 82/196 (41%), Gaps = 14/196 (7%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTD 117
I+ G+ A++G SG+GK+T ++ L + P G+V I+GR+++ + + +
Sbjct: 1012 IQPGKSTALVGQSGSGKST-IIGLIERFYDPIRGSVKIDGRDIKAYNPRALRRHIGLVSQ 1070
Query: 118 -----SLTVMEQLVFMTEMKLGNSTKQPNKSI-LNTVIEEFK--LSAHVETXXXXXXXXX 169
+ T+ E +V+ TE + +S + I K
Sbjct: 1071 EPTLFAGTIRENIVYGTETASEAEIEDAARSANAHDFISNLKDGYGTWCGERGVQLSGGQ 1130
Query: 170 XXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPS---- 225
A + L NP IL+ DE T+ LDS + V L ++ V+ + H+ S
Sbjct: 1131 KQRIAIARAILKNPAILLLDEATSALDSQSEKVVQEALDRVMIDRTSVVVA-HRLSTIQN 1189
Query: 226 CDIFKEFNSILLMAEG 241
CD+ +++ +G
Sbjct: 1190 CDLITVLEKGIVVEKG 1205
Score = 40.7 bits (91), Expect = 0.001
Identities = 46/204 (22%), Positives = 87/204 (42%), Gaps = 12/204 (5%)
Query: 55 NACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDV 114
N + G A++G SG+GK+T +++L + P G V ++G ++R L + Q +
Sbjct: 371 NLRVPAGRTVALVGGSGSGKST-VIALLERFYDPSAGEVMVDGVDIRRLRLKWLRAQMGL 429
Query: 115 FTD-----SLTVMEQLVFMTEMKLGNSTKQPNKSI-LNTVIEEFK--LSAHVETXXXXXX 166
+ + ++ E ++F E K+ ++ I + V
Sbjct: 430 VSQEPALFATSIRENILFGKEDATAEEVIAAAKAANAHSFISQLPQGYDTQVGERGVQMS 489
Query: 167 XXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSC 226
A + L +P+IL+ DE T+ LD+ + S V L L++ G+ I H+ S
Sbjct: 490 GGQKQRIAIARAILKSPKILLLDEATSALDTESESVVQEAL-DLASMGRTTIVIAHRLS- 547
Query: 227 DIFKEFNSILLMAEGNLLFHGTQD 250
+ + I +M G + G+ D
Sbjct: 548 -TIRNADIIAVMQSGEVKELGSHD 570
>08_02_1616 + 28260204-28262555
Length = 783
Score = 41.1 bits (92), Expect = 0.001
Identities = 44/175 (25%), Positives = 73/175 (41%), Gaps = 13/175 (7%)
Query: 59 REGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGR-----NVRDLTGA-EIVPQF 112
R G A++G SG GK++ L +L + P G V ++GR N+R L A +VPQ
Sbjct: 549 RAGRTLALVGASGCGKSSVL-ALVQRFYEPNSGRVLLDGRDLRKFNLRSLRRAMALVPQ- 606
Query: 113 DVFTDSLTVMEQLVF----MTEMKLGNSTKQPNKSILNTVIEEFKLSAHVETXXXXXXXX 168
+ F + T+ + + + TE ++ + N + + E V
Sbjct: 607 EPFLFAATIHDNIAYGREGATEAEVVEAATAANAHKFISALPE-GYGTLVGERGVQLSGG 665
Query: 169 XXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQ 223
A + + IL+ DE T+ LD+ + V L S SG+ I H+
Sbjct: 666 QRQRIAIARALVKQAPILLLDEATSALDAESERSVQEALASSSGSGRTTIVVAHR 720
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 176 ATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIFKEFNSI 235
A + L NP IL+ DE T+ LDS + V L + G+ + H+ S ++ + +
Sbjct: 21 ARAMLRNPAILLLDEATSALDSESEKLVQEALDRFMI-GRTTLVIAHRLS--TIRKADLV 77
Query: 236 LLMAEGNLLFHGTQD 250
++ G + GT D
Sbjct: 78 AVLQGGAISEVGTHD 92
>05_02_0030 +
5826065-5826092,5826307-5828309,5828412-5828732,
5828821-5828907,5828981-5829583,5829680-5829844,
5829941-5830235,5830320-5830534,5830621-5830926,
5831200-5831263,5831384-5831623,5831756-5831853
Length = 1474
Score = 41.1 bits (92), Expect = 0.001
Identities = 41/191 (21%), Positives = 76/191 (39%), Gaps = 13/191 (6%)
Query: 60 EGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTDSL 119
+GE A+ GP GAGK++ L ++ G+ G+V ++G VPQ + S
Sbjct: 646 QGEKIAVCGPVGAGKSSLLCAMLGEIP-RMSGSVAMSG-------SIAYVPQ-TPWIQSG 696
Query: 120 TVMEQLVFMTEMKLGNSTKQPNKSILNTVIEEFKLS--AHVETXXXXXXXXXXXXXXXAT 177
TV + ++F M + L+ +E F + A
Sbjct: 697 TVRDNILFGKPMNNEEYDRAIRCCALDKDMENFPHGDLTEIGQRGLNMSGGQKQRIQLAR 756
Query: 178 SFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIFKEFNSILL 237
+ + + + D+P + +D++ A+ + + K VI HQ + + + IL+
Sbjct: 757 AVYNGADVYLLDDPFSAVDAHTAATLFNDCVMAALENKTVILVTHQ--VEFLSKVDKILV 814
Query: 238 MAEGNLLFHGT 248
M G + GT
Sbjct: 815 MENGEITQEGT 825
Score = 33.1 bits (72), Expect = 0.29
Identities = 40/191 (20%), Positives = 76/191 (39%), Gaps = 11/191 (5%)
Query: 61 GEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTDSLT 120
G ++G +G+GKTT L +L + P+ G + I+ ++ + ++ + + T
Sbjct: 1260 GHKIGVVGRTGSGKTTLLSTLF-RLIDPYSGRILIDDLDICTIGLKDLRMKLSIIPQEPT 1318
Query: 121 VMEQLVFMTEMKLGNSTKQP-----NKSILNTVIEEFK--LSAHVETXXXXXXXXXXXXX 173
+ V LG T + NK L I L + V
Sbjct: 1319 LFRGSVRSNVDPLGLHTDEDIWEALNKCQLKKTISALPGLLESPVSDDGENWSAGQRQLF 1378
Query: 174 XXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIFKEFN 233
A L +IL+ DE T +DS + + ++K+ SG VI H+ + +
Sbjct: 1379 CLARVLLRRNKILVLDEATASIDSATDAVLQRVIKQ-EFSGCTVITIAHR--VPTVTDSD 1435
Query: 234 SILLMAEGNLL 244
+++++ G L+
Sbjct: 1436 MVMVLSYGKLI 1446
>03_05_0628 -
26245714-26245755,26245854-26245938,26246022-26246197,
26246325-26246432,26246713-26246788,26246878-26246939,
26247228-26247323,26247735-26247861,26247969-26248036
Length = 279
Score = 41.1 bits (92), Expect = 0.001
Identities = 44/168 (26%), Positives = 67/168 (39%), Gaps = 33/168 (19%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTD 117
IR GE IIGPSG GK+T L +AG L + V Q D
Sbjct: 66 IRHGEAVGIIGPSGTGKSTVLKVMAG-------------------LLAPDKVFQSAALFD 106
Query: 118 SLTVMEQLVFMTEMKLGNSTKQPNKSILNTVIE----------EFKLSAHVETXXXXXXX 167
SLTV E + F+ L ++ P + I V E E ++ + +
Sbjct: 107 SLTVRENVGFL----LYENSSLPEERIATLVTETLAAVGLKGVEDRMPSELSGGMKKRVA 162
Query: 168 XXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGK 215
T P++++ DEPT GLD ++ V +++ + +GK
Sbjct: 163 LARSIIYDDTKETIEPEVILYDEPTAGLDPIASTVVEDLIRSVHVTGK 210
>01_05_0215 +
19374279-19374327,19374629-19374633,19376902-19376956,
19377159-19377334,19378020-19378241,19378334-19378572,
19379201-19379726,19379801-19380074,19380524-19381187,
19381604-19381832,19381924-19382190,19382308-19382496,
19382664-19383308
Length = 1179
Score = 41.1 bits (92), Expect = 0.001
Identities = 49/215 (22%), Positives = 95/215 (44%), Gaps = 14/215 (6%)
Query: 46 AKPKTVIIDNACIR--EGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDL 103
++P+ ++ D ++ G A++G SG+GK+T ++SL + P G V I+G ++R +
Sbjct: 309 SRPEHLVFDGFSLQVPSGTRMALVGESGSGKST-VISLVERFYDPQSGEVLIDGVDIRRI 367
Query: 104 TGAEIVPQFDVFTDSLTVMEQLV--FMTEMKLGNSTKQPNKSILNTVIEEF--KLSAHVE 159
I + + + + + +T K + ++ N++I +F KL +E
Sbjct: 368 NLGSIRRKIGLVSQEPVLFAGTIRENITYGKEDPTLEEINRAIELANAAKFIDKLPNGLE 427
Query: 160 T----XXXXXXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGK 215
T A + NP+IL+ DE T+ LD + V L K+
Sbjct: 428 TMVGERGIQLSGGQKQRIAIARVIIKNPRILLLDEATSALDMESERVVQEALNKVMLERT 487
Query: 216 IVICSVHQPSCDIFKEFNSILLMAEGNLLFHGTQD 250
+I + H+ S K + I ++ G L+ G+ +
Sbjct: 488 TIIVA-HRLS--TVKNADMISVLQHGKLVEQGSHE 519
>06_01_0591 + 4261483-4261631,4261837-4262007,4262127-4262226,
4263151-4263315,4263416-4263544,4263758-4263858,
4264527-4264596,4265080-4265331,4265828-4265897,
4266281-4266341,4266916-4267003,4267746-4267830,
4268168-4268234,4268442-4268559,4268843-4268923,
4269022-4269267,4269670-4269771,4269847-4269914,
4270040-4270171,4270283-4270430,4270504-4270790,
4270920-4271067,4271156-4271331,4271407-4271518,
4271614-4271667,4273134-4273244,4273317-4273478,
4273627-4273814,4273948-4274137,4274297-4274464,
4274832-4274912
Length = 1359
Score = 40.7 bits (91), Expect = 0.001
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 16/202 (7%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRN-----VRDLTG-AEIVPQ 111
I G IIG +GAGK++ L +L + G + ++ + VRDL G +VPQ
Sbjct: 1146 ISSGMQVGIIGRTGAGKSSILNALLRLAPI-CNGRILVDDFDVAKLAVRDLRGHFAVVPQ 1204
Query: 112 FD-VFTDSLTV-MEQLVFMTEMKLGNSTKQPNKSILNTVIEEF-KLSAHVETXXXXXXXX 168
+F SL ++ T++++ + +K + T IE L HV+
Sbjct: 1205 SPFLFDGSLRENLDPFNRTTDLRIWEAL---DKCHMKTEIESIGGLDIHVKESGASFSVG 1261
Query: 169 XXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDI 228
A + L + +IL DE T +D+ AS + + G V+ H+ S
Sbjct: 1262 QRQLLCLARAILKSSKILCLDECTANVDNQTASLLQNTI-SAECKGMTVLTIAHRIS--T 1318
Query: 229 FKEFNSILLMAEGNLLFHGTQD 250
+ +SIL++ +G L+ G +
Sbjct: 1319 VMKMDSILVLDQGKLVEEGNPE 1340
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTING 97
+++G F AIIG G GK++ L S+ G+ + G++T G
Sbjct: 640 LQKGIFVAIIGEVGCGKSSLLNSIIGEIHVT-SGSITSYG 678
>09_02_0068 - 3832858-3833228,3835773-3836223
Length = 273
Score = 39.9 bits (89), Expect = 0.003
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 55 NACIREGEFAAIIGPSGAGKTTFLVSLAGKCTL-PFEGTVTINGRNVRDLTGA 106
+ C R GE AI+GPSG GKTT L +LA + P E GR+ GA
Sbjct: 123 SGCARPGEVLAIMGPSGCGKTTLLDTLAAVAAVTPPEAKGNTAGRSAPPKGGA 175
>03_02_0898 -
12246747-12246833,12247425-12247601,12248054-12248176,
12248545-12248766,12249556-12249606,12249712-12249987
Length = 311
Score = 39.9 bits (89), Expect = 0.003
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 55 NACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFE-GTVTINGRNVRDLTGAE 107
N IREGE A++G +G+GK+T + LAG GTV G N+ D+ E
Sbjct: 85 NLTIREGEIHALMGQNGSGKSTLMKVLAGHPEYEVTGGTVLFKGENLIDMEPEE 138
>01_06_0371 +
28819035-28819322,28820541-28820595,28821179-28821354,
28821481-28821702,28821796-28822034,28822107-28822632,
28822726-28822999,28823098-28823737,28823833-28824061,
28824299-28824565,28824700-28824963,28825045-28825689
Length = 1274
Score = 39.9 bits (89), Expect = 0.003
Identities = 45/167 (26%), Positives = 70/167 (41%), Gaps = 23/167 (13%)
Query: 46 AKPKTVIIDNACIR--EGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDL 103
A+P+ +I D + G AI+G SG+GK+T ++SL + P G V I+G N++ L
Sbjct: 387 ARPEQLIFDGFSLHVSSGTTMAIVGESGSGKST-VISLVERFYDPQAGEVLIDGINIKSL 445
Query: 104 TGAEIVPQFDVFTDSLTVMEQLVFMTEMKLGNSTKQPNKSILNTVIEEFKLS-------- 155
I + L E L+FMT +K N T + + + +L+
Sbjct: 446 RLNWIRGKI-----GLVSQEPLLFMTSIK-DNITYGKEDATIEEIRRAAELANAANFIDK 499
Query: 156 ------AHVETXXXXXXXXXXXXXXXATSFLSNPQILICDEPTTGLD 196
V A + L NP+IL+ DE T+ LD
Sbjct: 500 LPDGYDTMVGQRGAQLSGGQKQRIAIARAILKNPKILLLDEATSALD 546
Score = 33.5 bits (73), Expect = 0.22
Identities = 45/215 (20%), Positives = 93/215 (43%), Gaps = 21/215 (9%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFD---- 113
I G+ A++G SG+GK+T ++L + P GT+ ++ +++L + Q
Sbjct: 1056 IPSGKTVALVGESGSGKST-AIALLERFYNPESGTILLDEVEIKNLKVNWLRDQMGLVGQ 1114
Query: 114 ---VFTDSLTVMEQLVF-----MTEMKLGNSTKQPN-KSILNTVIEEFKLSAHVETXXXX 164
+F D T+ + + +TE +L + K N ++++ + + + V
Sbjct: 1115 EPVLFND--TIRANIAYGKHGDVTEEELIKAAKASNAHEFISSLPQGYDTT--VGERGVQ 1170
Query: 165 XXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQP 224
A + L +P+IL+ DE T+ LD+ + V L + G+ I H+
Sbjct: 1171 LSGGQKQRVAIARAILKDPKILLLDEATSALDAESERIVQDALDNVMV-GRTTIIVAHRL 1229
Query: 225 SCDIFKEFNSILLMAEGNLLFHGTQDACKSFFESI 259
S K + I ++ +G + G +A + + +
Sbjct: 1230 S--TIKGADIIAVLKDGAIAEKGRHEALMNIKDGV 1262
>04_04_1439 + 33614112-33614123,33614278-33615649,33615705-33616141
Length = 606
Score = 39.1 bits (87), Expect = 0.004
Identities = 40/166 (24%), Positives = 67/166 (40%), Gaps = 8/166 (4%)
Query: 55 NACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDV 114
+A + G+ A++GP+GAGK+T L LAG+ T P G RN + G D
Sbjct: 395 DADVSMGQRVAVVGPNGAGKSTLLKLLAGELT-PTSGEAR---RNPKLRIGLYSQHFCDA 450
Query: 115 FTDSLTVMEQLVFMTEMKLGNSTKQPNKSILNTVIEEFKLS--AHVETXXXXXXXXXXXX 172
+ + ++ E + + + F L+ +H+ T
Sbjct: 451 LPEEKSPVQHGQCHRECLDTHPHLKSKPWEARAKLARFGLAKESHL-TTIGKLSGGQKAR 509
Query: 173 XXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVI 218
A+ L P +L+ DEPT LD N + L + A G +++
Sbjct: 510 VALASVALGEPHVLLLDEPTNNLDMQNIDALADALDEF-AGGVVIV 554
>01_06_0366 -
28779899-28780543,28780813-28781076,28781165-28781431,
28781546-28781774,28781868-28781985,28782229-28782486,
28782585-28782858,28782950-28783475,28784289-28784527,
28784626-28784847,28784912-28784914,28785124-28785299,
28786147-28786201,28786288-28786557
Length = 1181
Score = 39.1 bits (87), Expect = 0.004
Identities = 54/225 (24%), Positives = 97/225 (43%), Gaps = 24/225 (10%)
Query: 42 WRKVAKPKTVIIDNACIR--EGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRN 99
+R A+P+ +I+D ++ G AI+G SG+GK+T ++SL + P G V I+G +
Sbjct: 378 FRYPARPEQLILDGLSLQVASGTTMAIVGESGSGKST-VISLVERFYDPQSGEVLIDGIS 436
Query: 100 VRDLTGAEIVPQFDVFTDSLTVMEQLVFMTEMK------LGNSTKQPNK---SILNTVIE 150
++ L I + L E L+FM +K ++T + K + N
Sbjct: 437 IKKLRLDWIRGKI-----GLVSQEPLLFMASIKDNIIYGKKDATLEEIKRAAELANAANF 491
Query: 151 EFKLSAHVET----XXXXXXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGI 206
KL +T A + L +P+IL+ DE T+ LD + V
Sbjct: 492 IDKLPNGYDTLVGQRGTQLSGGQKQRIAIARAILKDPKILLLDEATSALDVESERIVQEA 551
Query: 207 LKKLSASGKIVICSVHQPSCDIFKEFNSILLMAEGNLLFHGTQDA 251
L ++ + + H+ S + + I ++ +G ++ G DA
Sbjct: 552 LNRMMVE-RTTLVVAHRLS--TVRNVDCITVVRKGKIVEQGPHDA 593
Score = 35.1 bits (77), Expect = 0.073
Identities = 42/196 (21%), Positives = 82/196 (41%), Gaps = 13/196 (6%)
Query: 65 AIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTDSLTVMEQ 124
A++G SG+GK+T +++L + P G ++++G +R L + + Q + +
Sbjct: 970 ALVGESGSGKST-IIALLERFYDPDSGNISLDGVEIRSLKVSWLRDQMGLVGQEPVLFND 1028
Query: 125 LVF--MTEMKLGNSTKQPNKSILNTV-IEEFKLSAH------VETXXXXXXXXXXXXXXX 175
+ +T K T++ ++ EF S V
Sbjct: 1029 TIRANITYGKHSEVTEEEITAVAKAANAHEFVSSLPQGYDTVVGEKGVQLSGGQKQRVAI 1088
Query: 176 ATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIFKEFNSI 235
A + L +P+IL+ DE T+ LD+ + V L ++ + + I H+ S K + I
Sbjct: 1089 ARAILKDPKILLLDEATSALDAESERVVQDALDRVMVN-RTTIVVAHRLS--TIKGADMI 1145
Query: 236 LLMAEGNLLFHGTQDA 251
++ EG + G +A
Sbjct: 1146 AVLKEGKIAEKGKHEA 1161
>07_03_0293 +
16321539-16321893,16322020-16322207,16322881-16322904,
16323497-16323550,16323854-16323944,16324715-16324815,
16324949-16324999,16326626-16326754,16327772-16327834,
16327928-16328171,16329628-16329776,16329855-16329944,
16330343-16330477,16330579-16330635,16331079-16331135,
16332299-16332336,16332532-16332601,16332971-16333207
Length = 710
Score = 38.7 bits (86), Expect = 0.006
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 61 GEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVR 101
G+ A++GPSGAGK+T +V L + P G +T+ G ++R
Sbjct: 458 GKITALVGPSGAGKST-VVQLLARYYEPTHGRITVAGEDIR 497
>01_05_0212 +
19347142-19347444,19348853-19348907,19349117-19349292,
19350033-19350254,19350359-19350597,19351100-19351625,
19351707-19351980,19352166-19352225,19352362-19353025,
19353747-19353975,19354071-19354337,19354414-19354602,
19354771-19355415
Length = 1282
Score = 38.7 bits (86), Expect = 0.006
Identities = 46/196 (23%), Positives = 84/196 (42%), Gaps = 14/196 (7%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTD 117
I G A++G SG+GK+T ++SL + P G V I+G ++R + I + + +
Sbjct: 406 IPSGRTMALVGESGSGKST-VISLVERFYDPQSGEVLIDGIDIRRMNLGWIRGKISLVSQ 464
Query: 118 -----SLTVMEQLVFMTEMKLGNSTKQPNKSILNTVIEEFKLSAHVET----XXXXXXXX 168
S T+ E + + E + K+ + N KL +ET
Sbjct: 465 EPVLFSSTIRENIAYGKEDQTLEEIKRA-VELANAAKFVDKLPNGLETMVGERGIQLSGG 523
Query: 169 XXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDI 228
A + + NP+IL+ DE T+ LD + V L ++ +I + H+ S
Sbjct: 524 QKQRIAIARAIIKNPRILLLDEATSALDMESERVVQDALNRVMLERTTIIVA-HRLS--T 580
Query: 229 FKEFNSILLMAEGNLL 244
K + I ++ +G ++
Sbjct: 581 VKNADVISVLQQGKMV 596
>07_01_1181 + 11203073-11203604,11204124-11204143
Length = 183
Score = 38.3 bits (85), Expect = 0.008
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 49 KTVIID--NACIREGEFAAIIGPSGAGKTTFLVSLAGK 84
+ VI+D + R GE A++GPSG GKTT L +LAG+
Sbjct: 142 RAVILDGLSGYARPGEVLALMGPSGCGKTTLLDALAGR 179
>04_01_0568 -
7279478-7279590,7279749-7279988,7280078-7280141,
7280242-7280547,7280643-7280857,7281395-7281689,
7281906-7281983,7282070-7282705,7283016-7283102,
7283945-7284265,7285503-7287599
Length = 1483
Score = 38.3 bits (85), Expect = 0.008
Identities = 44/211 (20%), Positives = 84/211 (39%), Gaps = 17/211 (8%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTD 117
+R+GE AA++G G+GK++ L + G+ GTV+I G V Q +
Sbjct: 666 VRKGELAAVVGTVGSGKSSLLSCIMGEMH-KVSGTVSICG-------STACVAQ-TAWIQ 716
Query: 118 SLTVMEQLVFMTEMKLGNSTKQPNKSILNTVIE--EFKLSAHVETXXXXXXXXXXXXXXX 175
+ T+ E ++F M + + L +E EF +
Sbjct: 717 NGTIQENILFGQPMHSERYREVIHACCLEKDLEMMEFGDKTEIGERGINLSGGQKQRIQL 776
Query: 176 ATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIFKEFNSI 235
A + + I + D+ + +D++ S + K K V+ HQ D K +++
Sbjct: 777 ARAVYQDCDIYLLDDIFSAVDAHTGSAIFKECLKGILKKKTVLLVTHQ--VDFLKNVDTV 834
Query: 236 LLMAEGNLLFHGTQD----ACKSFFESIDLH 262
+M +G ++ G+ + +C F + H
Sbjct: 835 FVMKDGVVIQSGSYNQLLTSCSDFSVLVTAH 865
Score = 32.7 bits (71), Expect = 0.39
Identities = 33/159 (20%), Positives = 63/159 (39%), Gaps = 8/159 (5%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTD 117
I GE ++G +G+GK+T LV + P EG + ++G ++ L ++ +F V
Sbjct: 1261 INSGEKIGVVGRTGSGKST-LVQALFRLVEPVEGHIIVDGVDIGTLGLHDLRSRFGVIPQ 1319
Query: 118 SLTVMEQLVFMTEMKLGNSTKQP-----NKSILNTVI--EEFKLSAHVETXXXXXXXXXX 170
+ E + +G ++ + L ++ + KL A V
Sbjct: 1320 EPVLFEGTIRSNIDPIGRYSEDEIWQALERCQLKDIVATKPEKLDALVADMGENWSVGQK 1379
Query: 171 XXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKK 209
L +IL DE T +DS + + I+++
Sbjct: 1380 QLLCFGRVILKRSRILFMDEATASVDSQTDATIQRIIRE 1418
>01_06_1760 -
39697079-39697162,39697280-39697340,39697415-39697479,
39697579-39697860,39697938-39698012,39698121-39698195,
39698343-39698399,39698653-39698726,39698912-39699055,
39699608-39699662,39700027-39700149,39700276-39700320,
39701068-39701160,39701249-39701662
Length = 548
Score = 37.9 bits (84), Expect = 0.010
Identities = 44/204 (21%), Positives = 85/204 (41%), Gaps = 15/204 (7%)
Query: 55 NACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDV 114
N + E AI+G SG+GK+T +V+L + P +G + ++G + +L +
Sbjct: 324 NLTLHPNEVVAIVGLSGSGKST-VVNLLLRLYEPTDGQILVDGVPLSELDIRWFRERIG- 381
Query: 115 FTDSLTVMEQLVFMTEMKLGNSTKQPNKSI----LNTVIEEFKLSA----HVETXXXXXX 166
F + ++ + ++ G + N+ + +F +S +
Sbjct: 382 FVGQEPRLFRMDISSNIRYGCPREVSNEEVEWAAKQAYAHDFIMSLPDGYNTIVDDALLS 441
Query: 167 XXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGK---IVICSVHQ 223
A + L +P IL+ DE T+ LD+ + V ++ K S K VI H+
Sbjct: 442 GGQKQRVAIARALLRDPSILVLDEATSALDAESEHYVKNVITKFSTDPKARRTVIIIAHR 501
Query: 224 PSCDIFKEFNSILLMAEGNLLFHG 247
S + + I++M GN++ G
Sbjct: 502 LS--TIQAADRIIVMENGNIVEDG 523
>02_02_0682 -
12923103-12923747,12924607-12924870,12924953-12925219,
12925301-12925529,12925614-12926295,12926409-12926682,
12926822-12927347,12927460-12927698,12927799-12927896,
12928017-12928020,12928657-12928832,12929593-12929647,
12930787-12931047
Length = 1239
Score = 37.5 bits (83), Expect = 0.014
Identities = 49/215 (22%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 46 AKPKTVIID--NACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDL 103
A+P+ +I + I G A++G SG+GK+T ++SL + P G V ++G N++ L
Sbjct: 338 ARPEQLIFTGFSISIPSGMTMALVGESGSGKST-VISLVERFYDPQSGEVLLDGVNMKLL 396
Query: 104 TGAEIVPQFDVFTD-----SLTVMEQLVFMTEMKLGNSTKQPNKSILNTVIEEF--KLSA 156
+ I + + + + T+ E + + K S ++ ++I+ +F KL
Sbjct: 397 NLSRIRQKIGLVSQEPILFTTTIRENIEY---GKKDASEEEIRRAIVLANAAKFIDKLPN 453
Query: 157 HVET----XXXXXXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSA 212
++T A + L +P+IL+ DE T+ LD+ + V L +
Sbjct: 454 GLDTMVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSALDAESEHVVQDALNNIMV 513
Query: 213 SGKIVICSVHQPSCDIFKEFNSILLMAEGNLLFHG 247
+ +I + H+ S + ++I ++ G L+ G
Sbjct: 514 NRTTIIVA-HRLS--TVRNADTISVLHRGQLVEQG 545
Score = 34.7 bits (76), Expect = 0.097
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 46 AKPKTVIIDNACIR--EGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDL 103
A+ I N C+R G+ A++G SG+GK+T +V+L + P G + ++G +++ L
Sbjct: 1007 ARTDVQIFTNLCLRIPSGKTVALVGESGSGKST-VVALLERFYDPDSGAIFLDGMDLKTL 1065
>12_02_0038 - 12630564-12630580,12630789-12631260
Length = 162
Score = 37.1 bits (82), Expect = 0.018
Identities = 17/25 (68%), Positives = 19/25 (76%)
Query: 59 REGEFAAIIGPSGAGKTTFLVSLAG 83
R GE AI+GPSG GKTT L +LAG
Sbjct: 134 RPGEVLAIMGPSGCGKTTLLDTLAG 158
>08_02_1615 + 28257275-28258428,28258523-28259144
Length = 591
Score = 37.1 bits (82), Expect = 0.018
Identities = 18/43 (41%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 61 GEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDL 103
G+ A++G SG+GK+T +VSL + P GT+ ++G ++RDL
Sbjct: 460 GKTIALVGSSGSGKST-VVSLIERFYEPNAGTILLDGHDLRDL 501
>05_01_0271 + 2105122-2105470,2105557-2105954,2106035-2106273,
2107120-2107645,2107817-2108090,2108197-2109056,
2109201-2109467,2109711-2109974,2110063-2110356,
2110455-2110814
Length = 1276
Score = 37.1 bits (82), Expect = 0.018
Identities = 47/221 (21%), Positives = 94/221 (42%), Gaps = 15/221 (6%)
Query: 42 WRKVAKPKTVIIDNAC--IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRN 99
+R +P I ++ C I+ G+ A++G SG+GK+T +SL + P G + ++G +
Sbjct: 1037 FRYPTRPDVQIFEDLCLTIQSGKTVALVGESGSGKST-AISLLQRFYDPDAGHILLDGVD 1095
Query: 100 VRDLTGAEIVPQFDVFTDSLTVMEQLV--FMTEMKLGNSTKQPNKSILNTV-IEEFKLSA 156
++ + Q + + + + + K G++T+ S +F S
Sbjct: 1096 IQKFQLRWLRQQMGLVSQEPALFNDTIRANIAYGKEGDATESDIVSSAQLANAHKFISSL 1155
Query: 157 H------VETXXXXXXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKL 210
H V A + + +P+IL+ DE T+ LD+ + V L ++
Sbjct: 1156 HQGYETMVGERGAQLSGGQKQRIAIARAIVKDPKILLLDEATSALDAESERVVQDALDRV 1215
Query: 211 SASGKIVICSVHQPSCDIFKEFNSILLMAEGNLLFHGTQDA 251
+ VI + H+ S + + I ++ G ++ G DA
Sbjct: 1216 MMNRTTVIVA-HRLS--TIQGADMIAVVKNGMIIEKGKHDA 1253
Score = 35.9 bits (79), Expect = 0.042
Identities = 42/201 (20%), Positives = 96/201 (47%), Gaps = 16/201 (7%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTD 117
I+ G A++G SG+GK+T ++SL + P G V I+G N+++L I + + +
Sbjct: 403 IQSGTTVALVGQSGSGKST-VISLIERFYDPQLGEVLIDGVNLKELQLRWIRSKIGLVSQ 461
Query: 118 -----SLTVMEQLVF----MTEMKLGNSTKQPNKS-ILNTVIEEFKLSAHVETXXXXXXX 167
+ ++++ + + T ++ + + N S ++ + + F + V
Sbjct: 462 EPILFAASIIDNIAYGRDNATNQEIRAAAELANASKFIDKMPQGF--ATLVGEHGTQLSG 519
Query: 168 XXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCD 227
A + L +P+IL+ DE T+ LD+ + V L ++ ++ VI + H+
Sbjct: 520 GQKQRIAIARAILKDPRILLLDEATSALDTESERIVQEALDRVMSNRTTVIVA-HR--LT 576
Query: 228 IFKEFNSILLMAEGNLLFHGT 248
+ ++I ++ +G+++ G+
Sbjct: 577 TVRNADTIAVIHQGSIVEKGS 597
>01_06_1699 -
39269477-39269574,39269690-39269929,39270029-39270092,
39270251-39270771,39271032-39271326,39271400-39271564,
39271650-39272237,39272617-39272703,39272982-39274429,
39274515-39275015,39275574-39275678,39276095-39276143
Length = 1386
Score = 36.3 bits (80), Expect = 0.032
Identities = 39/195 (20%), Positives = 80/195 (41%), Gaps = 12/195 (6%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTD 117
I +G+ A+ GP G+GK++ L S+ G+ +P ING V Q +
Sbjct: 560 ISKGQKVAVCGPVGSGKSSLLYSIMGE--IP-----RINGAETTVFGSRAYVAQ-SAWIQ 611
Query: 118 SLTVMEQLVFMTEMKLGNSTKQPNKSILNTVIEEFKLS--AHVETXXXXXXXXXXXXXXX 175
+ T+ + ++F +M + + L+ +E + V
Sbjct: 612 TGTIQDNVLFGKDMDRSFYEEVLHGCALDRDLELWANGDMTMVGERGMNLSGGQKQRIQL 671
Query: 176 ATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIFKEFNSI 235
A + S+ + + D+P + +D++ + + S K VI HQ + ++ + +
Sbjct: 672 ARALYSDSDVYLLDDPFSAVDAHTGAHLFKECLLRLMSSKTVIYVTHQ--LEFLRDADLV 729
Query: 236 LLMAEGNLLFHGTQD 250
L+M +G ++ G D
Sbjct: 730 LVMKDGRIVQSGKYD 744
>01_02_0042 -
10513799-10514152,10514252-10514545,10514630-10514893,
10515019-10515285,10515363-10516207,10516311-10516584,
10516694-10517219,10518009-10518247,10518370-10518591,
10518689-10518864,10518962-10519358
Length = 1285
Score = 36.3 bits (80), Expect = 0.032
Identities = 44/199 (22%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTD 117
I G A++G SG+GK+T ++SL + P G V I+G N+++ I + + +
Sbjct: 419 IPSGTTVALVGQSGSGKST-VISLIERFYDPQLGDVLIDGVNLKEFQLRWIRSKIGLVSQ 477
Query: 118 -----SLTVMEQLVF----MTEMKLGNSTKQPNKSILNTVIEEFKLSAHVETXXXXXXXX 168
+ ++ E + + T+ ++ + + N S + + L V
Sbjct: 478 EPVLFAASIKENIAYGKDNATDQEIRAAAELANASKFIDKMPQ-GLDTSVGEHGTQLSGG 536
Query: 169 XXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDI 228
A + L +P+IL+ DE T+ LD+ + V L ++ + VI + H+ S
Sbjct: 537 QKQRIAIARAILKDPRILLLDEATSALDAESERIVQEALDRVMTNRTTVIVA-HRLS--T 593
Query: 229 FKEFNSILLMAEGNLLFHG 247
+ ++I ++ +G L+ G
Sbjct: 594 VRNADTIAVIHQGTLVEKG 612
Score = 34.7 bits (76), Expect = 0.097
Identities = 45/221 (20%), Positives = 89/221 (40%), Gaps = 17/221 (7%)
Query: 42 WRKVAKPKTVIIDNAC--IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRN 99
+R +P I + C I G+ A++G SG+GK+T +SL + P G + ++G +
Sbjct: 1048 FRYPTRPDVEIFRDLCLTIHSGKTVALVGESGSGKST-AISLLQRFYDPDVGHILLDGVD 1106
Query: 100 VRDLTGAEIVPQFDVFTDSLTVMEQLVFMTEMKLGNSTKQPNKSILNTV----IEEFKLS 155
++ + Q + + + V + G + I+ +F S
Sbjct: 1107 IQKFQLKWLRQQMGLVSQEPALFNDTV-RANIAYGKEGEATESEIIEAAKLANAHKFISS 1165
Query: 156 AH------VETXXXXXXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKK 209
+H V A + + +P+IL+ DE T+ LD+ + V L +
Sbjct: 1166 SHQGYGTTVGERGAQLSGGQKQRIAIARAIVKDPKILLLDEATSALDAESERVVQDALDR 1225
Query: 210 LSASGKIVICSVHQPSCDIFKEFNSILLMAEGNLLFHGTQD 250
+ + VI + H+ S + + I ++ G ++ G D
Sbjct: 1226 VMVNRTTVIVA-HRLS--TIQNADLIAVVKNGVIIEKGKHD 1263
>12_02_0781 +
23105554-23106855,23107191-23107511,23107581-23107667,
23107907-23108302,23108327-23108500,23108600-23108764,
23108857-23109151,23109319-23109446,23109681-23109986,
23110531-23110591,23110676-23110915,23111251-23111372
Length = 1198
Score = 35.9 bits (79), Expect = 0.042
Identities = 37/192 (19%), Positives = 81/192 (42%), Gaps = 13/192 (6%)
Query: 55 NACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDV 114
N ++ G AI G G+GK++ L ++ G+ +G + ++G+ V Q +
Sbjct: 398 NLMVKSGTKVAICGEVGSGKSSLLAAILGEVPRT-DGVIQVSGK-------IAYVSQ-NA 448
Query: 115 FTDSLTVMEQLVFMTEMKLGN--STKQPNKSILNTVIEEFKLSAHVETXXXXXXXXXXXX 172
+ + +V + ++F + M T + + + I F +
Sbjct: 449 WIQTGSVKDNILFGSTMDKPRYEETLKFCSLVHDLEILPFGDLTQIGERGANLSGGQKQR 508
Query: 173 XXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIFKEF 232
A + + I + D+P + +D++ A+ + + S K V+ HQ + F
Sbjct: 509 IQLARALYHDADIYLLDDPFSSVDAHTATSLFNEYVMGALSEKTVLLVTHQ--VEFLHAF 566
Query: 233 NSILLMAEGNLL 244
+S+LLM++G ++
Sbjct: 567 DSVLLMSQGQIM 578
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 61 GEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNV 100
G+ I+G +G+GKTT L++ + P G +TI+G+++
Sbjct: 977 GDKIGIVGRTGSGKTT-LINAIFRLVEPSGGKITIDGQDI 1015
>04_03_0867 -
20414999-20415160,20415255-20415384,20415515-20415702,
20415967-20416001,20416363-20416579,20416737-20416820,
20417609-20417875,20417954-20418061,20418163-20418249,
20418629-20419399
Length = 682
Score = 35.9 bits (79), Expect = 0.042
Identities = 40/167 (23%), Positives = 69/167 (41%), Gaps = 14/167 (8%)
Query: 55 NACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLP---FEGTVTINGRNVRDLTGAEIVPQ 111
N IR GE A +GPSG GKTT L L + P + T G N+ L+G + +
Sbjct: 477 NLHIRSGETIAFVGPSGGGKTT-LAKLLLRLYQPQSVASWSATTEGENML-LSGT--IAE 532
Query: 112 FDVFTDSLTVMEQLVFMTEMKLGNSTKQPNKSILNTVIEEFKLSAHVETXXXXXXXXXXX 171
+ D + ++ + K+ N+ + + + + +++V
Sbjct: 533 NIAYGDPMGAIDMSKVESAAKIANA-----EEFIKMLPGGY--NSYVGQKGSSLSGGQKQ 585
Query: 172 XXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVI 218
A + N +LI DE T+ LDS + V L L A+ +++
Sbjct: 586 RLSIARAIYQNSSVLILDEATSALDSRSEILVKEALTNLMANHTVLV 632
>01_03_0260 -
14323503-14323603,14323751-14323990,14324212-14324275,
14324349-14324654,14324841-14325055,14325551-14325845,
14325965-14326129,14326324-14327352,14333553-14333814,
14334135-14334631,14338714-14340123
Length = 1527
Score = 35.9 bits (79), Expect = 0.042
Identities = 43/210 (20%), Positives = 86/210 (40%), Gaps = 17/210 (8%)
Query: 34 WTPEEKSIWRKVAKPKTVIIDNACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTV 93
W EE++ ++ A + + ID +R G AA++G G+GK++ L + G+ G V
Sbjct: 670 WEEEEEAAGQQ-AVLRGIDID---VRAGTLAAVVGMVGSGKSSLLGCILGEMR-KISGEV 724
Query: 94 TINGRNVRDLTGAEIVPQFDVFTDSLTVMEQLVFMTEMKLGNSTKQPNKSILNTVIE--E 151
T+ G VPQ + + T+ E ++F M+ + L+ +E E
Sbjct: 725 TVRG-------SMAYVPQ-TAWIQNGTIEENILFGRGMQRERYREAIRVCSLDKDLEMME 776
Query: 152 FKLSAHVETXXXXXXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLS 211
F + A + + + + D+ + +D++ S + + +
Sbjct: 777 FGDQTEIGERGINLSGGQKQRIQLARAVYQDADVYLLDDVFSAVDAHTGSDIFRDCVRGA 836
Query: 212 ASGKIVICSVHQPSCDIFKEFNSILLMAEG 241
K V+ HQ D + ++I +M +G
Sbjct: 837 LRDKTVLLVTHQ--LDFLRNAHAIYVMRDG 864
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTD 117
I GE ++G +G+GK+T + +L + P EG + I+G ++ L ++ +F +
Sbjct: 1309 IHGGEKIGVVGRTGSGKSTLIQALF-RIVEPSEGKIIIDGIDICTLGLHDLRSRFGIIPQ 1367
Query: 118 SLTVME 123
+ E
Sbjct: 1368 EPVLFE 1373
>05_01_0163 -
1125364-1125422,1126062-1126205,1126640-1126756,
1126835-1126926,1127942-1128022,1128323-1128378,
1128496-1128559,1128645-1128748,1129578-1129724,
1129876-1129989,1130070-1130153
Length = 353
Score = 35.1 bits (77), Expect = 0.073
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGR 98
I G+ ++GPSG GKT F + LA TLP E +NGR
Sbjct: 97 IPAGKLTEVVGPSGIGKTQFCLKLALLATLP-ECYGGLNGR 136
>09_01_0131 - 1966406-1966425,1967469-1967901
Length = 150
Score = 34.7 bits (76), Expect = 0.097
Identities = 16/24 (66%), Positives = 18/24 (75%)
Query: 59 REGEFAAIIGPSGAGKTTFLVSLA 82
R GE AI+GPSG GKTT L +LA
Sbjct: 121 RPGEVLAIMGPSGCGKTTLLDTLA 144
>04_04_1232 -
31956286-31956463,31957822-31957880,31959343-31959385,
31959599-31959679,31959779-31959890,31960764-31960824,
31961853-31962518
Length = 399
Score = 34.7 bits (76), Expect = 0.097
Identities = 43/180 (23%), Positives = 67/180 (37%), Gaps = 21/180 (11%)
Query: 55 NACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQF-- 112
N + E + G +G+GK+TFL LAG + P G V NG D+T + Q+
Sbjct: 30 NVSVHERTALVLTGANGSGKSTFLRMLAG-FSRPSAGEVLWNG---HDITSPGVFQQYKL 85
Query: 113 --------DVFTDSLTVMEQLVFMTEMKLGNSTKQPNKSILNTVIEEFKLSAHVETXXXX 164
D + LTV++ + + E+ G K IE L +
Sbjct: 86 QLNWMSLKDAVKEKLTVLDNVQWF-ELLEGKHGKSA------PAIELMGLGRLMNEKARM 138
Query: 165 XXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQP 224
A + I + DEP+ LD+ + I+ + G IV + H P
Sbjct: 139 LSMGQRKRLQLARLLAIDRPIWLLDEPSVALDAEGVKLLEYIIAEHRKKGGIVFVATHLP 198
>04_04_0271 + 24069218-24069433,24069695-24070365,24070458-24073410
Length = 1279
Score = 34.3 bits (75), Expect = 0.13
Identities = 40/201 (19%), Positives = 87/201 (43%), Gaps = 16/201 (7%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTD 117
I G+ A++GPSG+GK+T ++ L + G+V ++G ++R + A + Q + +
Sbjct: 1053 IGAGKTVALVGPSGSGKST-VIGLIERFYDAQRGSVLVDGEDIRSYSLARLRSQVALVSQ 1111
Query: 118 -----SLTVMEQLVF------MTEMKLGNSTKQPNKSILNTVIEEFKLSAHVETXXXXXX 166
S T+ + + + TE ++ + N + +E V
Sbjct: 1112 EPTLFSGTIRDNIAYGAAEEHATEDEVARAAALANAHGFISAMER-GYDTRVGERGAQLS 1170
Query: 167 XXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSC 226
A + L + +IL+ DE T+ LD+ + V + ++ G+ + H+ S
Sbjct: 1171 GGQRQRIALARAVLKDARILLLDEATSALDAASERLVQDAVDRM-LRGRTCVVVAHRLS- 1228
Query: 227 DIFKEFNSILLMAEGNLLFHG 247
++ ++I ++ +G + G
Sbjct: 1229 -TVEKSDTIAVVKDGRVAERG 1248
Score = 33.1 bits (72), Expect = 0.29
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 46 AKPKTVIID--NACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDL 103
++P T++++ N I EG ++G SG+GK+T ++SL + P G ++++ + L
Sbjct: 356 SRPDTLVLNGFNLTISEGATVGLVGGSGSGKST-VISLLQRFYSPDSGEISMDDHGIDTL 414
>01_06_1488 +
37716986-37717076,37717424-37717558,37717755-37717831,
37717934-37718181,37718503-37718559,37718665-37718800,
37718944-37719001,37719110-37719195,37719270-37719326,
37719537-37719557,37720553-37720954,37721500-37721647,
37721940-37722036,37724065-37724202,37724496-37724598,
37724792-37724828,37724905-37725014,37725141-37725164
Length = 674
Score = 34.3 bits (75), Expect = 0.13
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 53 IDNACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQF 112
+ A +R G I GPS +GK+ L++ A +C LP E T G + + ++ +F
Sbjct: 429 LHRAPLRPGNVVEIAGPSNSGKSQLLLTAAVQCILPKEWKGTYFGGLGKVVMYLDLDCRF 488
Query: 113 DV 114
DV
Sbjct: 489 DV 490
>03_01_0577 +
4261249-4262055,4262149-4262203,4262293-4262468,
4262554-4262718,4262811-4263178,4263225-4263861,
4263952-4265844,4266325-4266672
Length = 1482
Score = 33.9 bits (74), Expect = 0.17
Identities = 16/48 (33%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 176 ATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQ 223
A + + +P+IL+ DEPT+ LD+ + + V + +L A+G+ V+ H+
Sbjct: 755 ARAIIRDPRILLLDEPTSALDTQSEAVVQQSIDRL-AAGRTVVVIAHR 801
Score = 33.1 bits (72), Expect = 0.29
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 46 AKPKTVIIDNACIR--EGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDL 103
++P+ ++ +R G A++G SG+GK+T +V L + P +G V + G + R+L
Sbjct: 1247 SRPEVTVLSGFSLRVKAGTTVAVVGASGSGKST-VVWLVQRFYDPGDGKVVVGGVDAREL 1305
>06_03_0473 +
21190878-21191188,21191269-21192355,21192972-21193194,
21193286-21193356,21193385-21193441,21193442-21194056,
21194168-21194237,21194470-21194745,21194916-21195130,
21195224-21195529,21195750-21195813,21195902-21196141,
21196306-21196415
Length = 1214
Score = 33.1 bits (72), Expect = 0.29
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKC--TLPFEGTVTIN 96
IR GE A+ GP G+GK++ L +L G+ T GTV N
Sbjct: 433 IRRGEKVAVCGPVGSGKSSLLCALLGEIPRTSGMSGTVRDN 473
>11_06_0325 +
22376195-22377001,22377136-22377525,22377638-22377778,
22377888-22378067,22378268-22378447,22378536-22378637,
22378768-22378896,22379318-22379422,22379528-22379623
Length = 709
Score = 32.3 bits (70), Expect = 0.52
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 55 NACIREGEFAAIIGPSGAGKTTFLVSLAG 83
N + GE AIIGP+G GK+T L + G
Sbjct: 453 NLIVERGEKIAIIGPNGCGKSTLLKLILG 481
Score = 29.9 bits (64), Expect = 2.7
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 44 KVAKPKTVIIDNAC-IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRD 102
K K TV+ D + ++ GE ++G +GAGKTT L +AG P G V N+R
Sbjct: 98 KSYKGVTVLRDVSWEVQRGEKVGLVGVNGAGKTTQLRIIAG-LEDPDAGAVVKAKDNMRI 156
Query: 103 LTGAEIVPQFDVFTDSLTVMEQLV--FMTEMKL 133
A + +F+V S TV E+ + F EM++
Sbjct: 157 ---AFLSQEFEVCA-SRTVREEFLAAFEEEMEV 185
>08_02_1614 -
28243532-28244589,28245149-28245383,28245524-28245734,
28245834-28245907,28246465-28246665
Length = 592
Score = 31.9 bits (69), Expect = 0.68
Identities = 35/134 (26%), Positives = 51/134 (38%), Gaps = 15/134 (11%)
Query: 65 AIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTDSLTV-ME 123
A++GP+GAGK+T L + G P +G VR I + L + M
Sbjct: 407 ALVGPNGAGKSTLLKLMTGDLA-PLDGM-------VRRHNHLRIAQYHQHLAEKLDLDMP 458
Query: 124 QLVFMTEMKLGNSTKQPNKSILNTVIEEFKLSAHVETX-XXXXXXXXXXXXXXATSFLSN 182
L +M GN ++ + I +F LS + A
Sbjct: 459 ALQYMMREYPGNEEEK-----MRAAIGKFGLSGKAQVMPMRNLSDGQRSRVIFAWLAYRQ 513
Query: 183 PQILICDEPTTGLD 196
PQ+L+ DEPT LD
Sbjct: 514 PQLLLLDEPTNHLD 527
>02_02_0464 -
10552347-10552466,10552683-10552928,10553866-10554135,
10554231-10554413,10554493-10554688,10554775-10555079,
10555515-10555604,10555689-10555806,10555991-10556088,
10556187-10556272,10557622-10557736
Length = 608
Score = 31.5 bits (68), Expect = 0.90
Identities = 37/178 (20%), Positives = 72/178 (40%), Gaps = 12/178 (6%)
Query: 59 REGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVT--INGRNV-RDLTGAEIVPQFD-V 114
R G+ ++G +G GK+T L LAGK P G T N + R+ G+E+ F +
Sbjct: 105 RPGQVLGLVGTNGIGKSTALKILAGK-VKPNLGKFTDPPNWDEIMRNFRGSELQKYFTRL 163
Query: 115 FTDSLTVMEQLVFMTEM------KLGN-STKQPNKSILNTVIEEFKLSAHVETXXXXXXX 167
D + + ++ + K+G+ +K+ + + N + + +L+ ++
Sbjct: 164 LEDKMKATMKPQYLDHIPKSVTGKVGDLLSKKDERHMKNLLCDTLELNQVLDRDVSALSG 223
Query: 168 XXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPS 225
A + + + DEP+ LD + +++ L VI H S
Sbjct: 224 GELQRFAIAARAMEEADVYMFDEPSCYLDVKQRLKAAQVIRSLLQPKNYVIVVEHDLS 281
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 53 IDNACIREGEFAAIIGPSGAGKTTFLVSLAGK 84
+ + + ++G +G GKTTF+ LAG+
Sbjct: 369 VTEGSFNDSQIIVMLGENGTGKTTFIRMLAGR 400
>01_01_0832 - 6500139-6500333,6500610-6500875,6501494-6501815,
6501915-6502156,6502229-6502457,6503020-6503184,
6503279-6503605,6504150-6504191,6504333-6504400,
6504748-6504934,6506249-6506311,6506748-6506790,
6506919-6507019,6507110-6507184,6507359-6507445,
6507593-6507682,6507906-6507992,6508585-6508783,
6509113-6509177,6509502-6509606,6509726-6509871,
6510100-6510224,6510335-6510437,6510482-6510596,
6510734-6510869,6511298-6511387,6511484-6511578,
6511698-6511763,6511868-6511936,6512034-6512147,
6512241-6512448,6512545-6512600,6512818-6513552
Length = 1671
Score = 31.5 bits (68), Expect = 0.90
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKCT 86
++E + ++GPSG+GKT+ L +LAG T
Sbjct: 1404 LKEKDHLLVMGPSGSGKTSLLRALAGLWT 1432
>04_01_0567 - 7263744-7263922,7264020-7264259,7264919-7264982,
7265088-7265393,7265652-7265866,7266195-7266489,
7266596-7266655,7267091-7267717,7268510-7268596,
7269292-7269612,7270051-7270224,7272806-7275022
Length = 1594
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTD 117
I GE ++G +G+GK+T + +L + P +GT+ I+G ++ L ++ +F +
Sbjct: 1350 ISGGEKIGVVGRTGSGKSTLIQALF-RLVEPVQGTMIIDGIDICTLGLHDLRSRFGIIPQ 1408
Query: 118 SLTVME 123
+ E
Sbjct: 1409 EPVLFE 1414
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 55 NACIREGEFAAIIGPSGAGKTTFLVSLAGK 84
N +R GE AA++G G+GK++ L + G+
Sbjct: 703 NIEVRRGELAAVVGTVGSGKSSLLSCIMGE 732
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 176 ATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIFKEFNSI 235
A + N I + D+ + +D++ S + + GK ++ HQ D ++I
Sbjct: 875 ARAVYQNCDIYLLDDVFSAVDAHTGSSIFKECLRGMLKGKTILLVTHQ--VDFLHNVDNI 932
Query: 236 LLMAEGNLLFHGTQD 250
+M +G ++ G D
Sbjct: 933 FVMRDGMIVQSGKYD 947
>08_02_0538 - 18321101-18321128,18321767-18322587
Length = 282
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 54 DNACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFE--GTVTINGRNVRDLTGAEIVPQ 111
D + R+ +I GP G GKTT + K F+ V+++ R +RD+ +I P
Sbjct: 189 DESSARQLRIVSIFGPGGLGKTTLANQVHRKIKGQFDYAALVSVSQRPIRDIL-TKIAPS 247
Query: 112 FDVFTDSLTVME 123
+ TDS + ++
Sbjct: 248 V-IPTDSSSSLD 258
>06_03_1249 -
28688997-28689248,28689469-28689533,28690016-28690093,
28691480-28691824,28693314-28693510,28695601-28696601
Length = 645
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 58 IREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNV 100
+ G +IGPSG+GK+T L +L + P G V ++G ++
Sbjct: 450 VPRGVVVGVIGPSGSGKSTLLRAL-NRLWEPAPGAVLLDGVDI 491
>04_04_1183 -
31537196-31537290,31537665-31537986,31538176-31538277,
31538826-31539071,31539385-31539506,31539588-31540344,
31540447-31540770,31540872-31541052,31541208-31541602,
31541877-31541942,31542225-31542377,31542593-31542691,
31542776-31542982,31543432-31543572,31543852-31544019,
31544302-31544395,31544479-31544585,31545140-31545274,
31545549-31545656,31545975-31546049,31546197-31546262,
31546500-31546556,31546678-31546702,31546809-31546889,
31546966-31547080,31547211-31547370,31547444-31547483,
31547599-31547780,31547905-31548234
Length = 1650
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 42 WRKVAKPKTVIIDNACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVT 94
W A+ T+ N + G AI+G +G GKT+ + ++ G+ P G+ T
Sbjct: 625 WESQAERPTLSNVNLDVPMGSLVAIVGSTGEGKTSLISAMLGEIP-PVSGSNT 676
>09_06_0365 -
22582467-22583524,22584407-22584641,22585474-22585684,
22585775-22585848,22585943-22586092
Length = 575
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 65 AIIGPSGAGKTTFLVSLAGKCTLPFEGTV 93
A++GP+GAGK+T L + G +P +G V
Sbjct: 390 ALVGPNGAGKSTLLKLMTGD-LIPLDGMV 417
>02_05_1169 +
34656450-34656603,34657321-34657481,34657907-34657958,
34658289-34658425,34658775-34658861,34658939-34659226
Length = 292
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/30 (50%), Positives = 18/30 (60%)
Query: 55 NACIREGEFAAIIGPSGAGKTTFLVSLAGK 84
N I G +IG +G+GKTT L LAGK
Sbjct: 34 NLRIAPGSRCLLIGANGSGKTTLLKILAGK 63
>09_05_0006 -
20030673-20030895,20031432-20031478,20031597-20031665,
20032590-20032725,20032900-20033067,20034286-20034354,
20034535-20034631,20034742-20034820,20035702-20035872
Length = 352
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/50 (30%), Positives = 21/50 (42%)
Query: 217 VICSVHQPSCDIFKEFNSILLMAEGNLLFHGTQDACKSFFESIDLHCPLN 266
++C H+ SC +F E N + E L G +S S D C N
Sbjct: 99 MLCFHHKKSCVVFSESNLFHFLVERCALARGISSIIRSLLSSNDQWCIAN 148
>03_01_0300 + 2350232-2352274,2352349-2352669,2352752-2352838,
2353031-2353708,2353800-2353964,2354139-2354433,
2354581-2354795,2354885-2355190,2355269-2355332,
2355426-2355665,2355783-2355886
Length = 1505
Score = 29.9 bits (64), Expect = 2.7
Identities = 37/190 (19%), Positives = 79/190 (41%), Gaps = 11/190 (5%)
Query: 61 GEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTDSLT 120
G+ I+G +G+GK+T + +L + P G V I+ ++ + ++ + + T
Sbjct: 1289 GKKIGIVGRTGSGKSTLIQALF-RLIEPTGGKVIIDDVDISRIGLHDLRSRLSIIPQDPT 1347
Query: 121 VMEQLVFMTEMKLGNSTKQP-----NKSILNTVI--EEFKLSAHVETXXXXXXXXXXXXX 173
+ E + M L T Q K L VI ++ KL + V
Sbjct: 1348 LFEGTIRMNLDPLEECTDQEIWEALEKCQLGEVIRSKDEKLDSPVLENGDNWSVGQRQLI 1407
Query: 174 XXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIFKEFN 233
+ L +IL+ DE T +D+ + + I++ S +C++ + + +
Sbjct: 1408 ALGRALLKQAKILVLDEATASVDTATDNLIQKIIR--SEFKDCTVCTIAHRIPTVI-DSD 1464
Query: 234 SILLMAEGNL 243
+L++++G +
Sbjct: 1465 LVLVLSDGKI 1474
>02_03_0314 -
17600970-17600974,17601230-17601357,17601832-17601924,
17602145-17602257,17602520-17602627,17602724-17602828,
17603185-17603355,17603474-17603652,17603741-17603969,
17604841-17604955,17605137-17605312,17606060-17606143,
17606463-17606630,17607011-17607097,17607201-17607323
Length = 627
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 66 IIGPSGAGKTTFLVSLAGKCT 86
I+GP+GAGKTT + L CT
Sbjct: 32 IVGPNGAGKTTIIECLKLSCT 52
>01_05_0430 +
22078651-22078677,22079269-22079356,22079669-22079929,
22080693-22080950,22081036-22081160,22082375-22082851,
22082937-22083848
Length = 715
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 9/50 (18%)
Query: 66 IIGPSGAGKTTFLVSLAGKCTLPF---------EGTVTINGRNVRDLTGA 106
++GP G GKT ++AG+ +PF E V + R VRDL A
Sbjct: 268 LVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFAA 317
>06_03_1068 -
27341103-27341444,27341689-27341929,27342030-27342343,
27342672-27343805
Length = 676
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 47 KPKTVIIDNACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPF 89
KP+ A I +G ++GP G GKT ++AG+ +PF
Sbjct: 235 KPERFTAVGARIPKG--VLLVGPPGTGKTLLAKAIAGEAGVPF 275
>04_04_0171 -
23282840-23283036,23283360-23283660,23283747-23284070,
23284678-23284698,23284877-23285788
Length = 584
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 66 IIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTDSLTVMEQL 125
++GP G GKT ++AG+ +PF V G D+F ++ +
Sbjct: 335 LVGPPGTGKTLLARAVAGEAGIPFFSVSA--SEFVEVFVGRGAARVRDLFKEAKEAAPSI 392
Query: 126 VFMTEM 131
+F+ E+
Sbjct: 393 IFIDEL 398
>01_06_1310 -
36176008-36176472,36176547-36176774,36177313-36178080,
36178250-36178732,36179883-36180010,36180539-36180607,
36180688-36180892,36181005-36181067
Length = 802
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 64 AAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDL-TGAEIVPQFDVFTDSLTVM 122
A ++GP G GKT + AG+ +PF ++I+G + ++ G ++F ++
Sbjct: 356 ALLVGPPGTGKTLLAKATAGESGVPF---LSISGSDFMEMFVGVGPSRVRNLFQEARQCS 412
Query: 123 EQLVFMTEM 131
+VF+ E+
Sbjct: 413 PSIVFIDEI 421
>01_05_0429 +
22070636-22070662,22071490-22071577,22071908-22072168,
22072925-22073161,22073251-22073375,22074093-22074569,
22074655-22075569
Length = 709
Score = 29.5 bits (63), Expect = 3.6
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 9/50 (18%)
Query: 66 IIGPSGAGKTTFLVSLAGKCTLPF---------EGTVTINGRNVRDLTGA 106
++GP G GKT ++AG+ +PF E V + R VRDL A
Sbjct: 261 LVGPPGTGKTMLARAVAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFAA 310
>10_08_0185 +
15578607-15578845,15580422-15580536,15580656-15580745,
15581935-15582033,15582154-15582258
Length = 215
Score = 29.1 bits (62), Expect = 4.8
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 64 AAIIGPSGAGKTTFLVSLA-GKCTLPFEG---TVTINGRNVRDLTGAEIVPQFDVFTDSL 119
AA+I G G F++S + G L F T ++ D+ AE V F F +
Sbjct: 124 AAMISLKGLGGLLFILSSSLGAYLLLFHLAFITPVVHDFYNYDIESAEFVQLFTKFAQNC 183
Query: 120 TVMEQLVFMTEMKLGNSTKQPNK 142
++ L+F MK +QPN+
Sbjct: 184 ALVGALLFFLAMKNSIPKRQPNR 206
>10_01_0172 - 1928648-1930751,1932019-1932243,1933709-1934676
Length = 1098
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 53 IDNACIREGEFAAIIGPSGAGKTTFLVSLAGKCTLPFE--GTVTINGRNVRDLTGAEIVP 110
+D +E +I+G G GKTT ++L K F+ VT++ D +I+
Sbjct: 188 VDGTACQEPAVVSIVGFGGVGKTTIAMALYKKVMYQFDCRAWVTVSQNYDLDAVLNDILK 247
Query: 111 QFD 113
Q D
Sbjct: 248 QID 250
>05_05_0098 +
22373384-22373522,22373566-22373772,22373879-22373953,
22374611-22374744,22375189-22375674,22375854-22376621,
22377367-22377594,22378294-22378773
Length = 838
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/69 (24%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 64 AAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDL-TGAEIVPQFDVFTDSLTVM 122
A ++GP G GKT + AG+ +PF ++I+G + ++ G ++F ++
Sbjct: 387 ALLVGPPGTGKTLLAKATAGESGVPF---LSISGSDFMEMFVGVGPSRVRNLFQEARQCA 443
Query: 123 EQLVFMTEM 131
++F+ E+
Sbjct: 444 PSIIFIDEI 452
>04_04_0961 + 29715938-29716034,29716918-29717133,29717438-29717776,
29718247-29719274,29719465-29719551,29719636-29720043,
29720394-29720558,29720742-29721036,29721131-29721345,
29721838-29722143,29722474-29722537,29722644-29722883,
29722959-29723062
Length = 1187
Score = 29.1 bits (62), Expect = 4.8
Identities = 35/140 (25%), Positives = 57/140 (40%), Gaps = 10/140 (7%)
Query: 66 IIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNV-----RDLTG-AEIVPQFDVFTDSL 119
I+G +G+GK+T + +L + P EGT+ I+ ++ DL G I+PQ +
Sbjct: 976 IVGRTGSGKSTLIQALF-RIVEPREGTIEIDNIDICRIGLHDLRGRLSIIPQDPTMFEG- 1033
Query: 120 TVMEQLVFMTEMKLGNSTKQPNKSILNTVIEEF--KLSAHVETXXXXXXXXXXXXXXXAT 177
TV L + E + +K L ++ + KL + V
Sbjct: 1034 TVRGNLDPVNEYSDQRIWEILDKCQLGDIVRQSPKKLDSTVVENGENWSVGQRQLFCLGR 1093
Query: 178 SFLSNPQILICDEPTTGLDS 197
L +LI DE T +DS
Sbjct: 1094 VLLKRSNVLILDEATASVDS 1113
>03_02_0153 -
5961910-5962441,5962779-5963128,5963415-5963681,
5964149-5964379
Length = 459
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 212 ASGKIVICSVHQPSCDIFKEFNSILLMAEGNLLFHGTQDA 251
A GKIVIC+ H PS + FK+F + G T DA
Sbjct: 305 AMGKIVICANH-PSNEFFKQFPNCRTYDSGEEFVQLTLDA 343
>02_01_0063 -
451471-451725,451825-451913,452028-452133,452214-452342,
452886-452970,453514-453545
Length = 231
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/79 (21%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Query: 176 ATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSASGKIVICSVHQPSCDIFKEFNSI 235
A S + +P+++ DEP++GLD + + +K I++ + + + I
Sbjct: 74 AISLIGDPKVVYMDEPSSGLDPASRKDLWNAVKSAKQDRAIILTTHSMEEAEFL--CDRI 131
Query: 236 LLMAEGNLLFHGTQDACKS 254
++A G+L G K+
Sbjct: 132 GIIANGSLQCIGNSKELKA 150
>08_01_0404 -
3590296-3590409,3590529-3590819,3592414-3592461,
3592559-3592795,3593668-3593704,3594311-3594627
Length = 347
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 206 ILKKLSASGKIVICSVHQPSC-DIFKEFNSILLMAEGNLLFHGTQD 250
+L SG V+C V+ C DI+K I + L+ HGT D
Sbjct: 172 VLHSAILSGLRVVCHVNFTFCFDIYKNVKKIKKVKSPVLVIHGTDD 217
>06_01_0876 - 6712224-6712812,6713777-6715233
Length = 681
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 66 IIGPSGAGKTTFLVSLAGKCTLPF 89
++GP G GKT ++AG+ +PF
Sbjct: 254 LVGPPGTGKTLLAKAIAGEAGVPF 277
>11_06_0348 - 22561589-22563656,22563788-22564602
Length = 960
Score = 28.3 bits (60), Expect = 8.4
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 17/94 (18%)
Query: 65 AIIGPSGAGKTTFLVSLAG--KCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTDSLTVM 122
AI GP+G GKTT + L +C F+ + N R G+++VPQ T++
Sbjct: 183 AIAGPAGIGKTTLAMELHRRLRCQTHFQCHIVANFS--RRPHGSKLVPQ--------TIL 232
Query: 123 EQLVFMTEMKLGNSTKQPNKSILNTVIEEFKLSA 156
+Q++ E + PN S + + ++ +L A
Sbjct: 233 KQIIEQLE-----APSSPNSSEITMLGDDLELLA 261
>11_06_0031 +
19425011-19425113,19425552-19425637,19425732-19425829,
19425950-19426067,19426200-19426289,19426770-19427074,
19427162-19427357,19427435-19427617,19427713-19427982,
19428906-19429151,19429633-19429704,19430087-19430104
Length = 594
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 59 REGEFAAIIGPSGAGKTTFLVSLAGK 84
R G+ ++G +G GK+T L LAGK
Sbjct: 101 RPGQVLGLVGTNGIGKSTALKVLAGK 126
>11_01_0060 + 453615-454030,454086-455862
Length = 730
Score = 28.3 bits (60), Expect = 8.4
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 65 AIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNVRDLTGAEIVPQFDVFTDSLT--VM 122
A I G F+ + K + G+V I+ + + D E+V V + L +
Sbjct: 404 ATILKQGFASCQFVSTSLIKANVAAFGSVQISLKIIEDAGKMELVSWGVVISAFLKHGLN 463
Query: 123 EQLVFMTEMKLGNSTKQPNKSILNTVI 149
++++F+ + G+ST +P++ IL TV+
Sbjct: 464 DEVIFLFNLFRGDSTNKPDEFILATVL 490
>01_07_0299 +
42594363-42594424,42594516-42594798,42595185-42595409,
42596395-42596592,42596871-42597325,42597824-42597962,
42598035-42598113,42598686-42598924,42599058-42599362,
42599449-42599560,42599640-42599804,42599933-42600071,
42600111-42600219,42600733-42600823,42600940-42601064,
42601148-42601297,42601383-42601455,42601630-42601810,
42601888-42602046,42602939-42603085,42603176-42603220,
42603305-42603382,42603565-42603719,42603875-42603927,
42604012-42604090,42604271-42604357
Length = 1310
Score = 28.3 bits (60), Expect = 8.4
Identities = 49/208 (23%), Positives = 79/208 (37%), Gaps = 19/208 (9%)
Query: 44 KVAKPK-TVIIDNACIR--EGEFAAIIGPSGAGKTTFLVSLAGKCTLPFEGTVTINGRNV 100
KV P V++D+ +R G I GP+G+GK++ L G L G + G
Sbjct: 454 KVVTPSGNVLVDDLTLRVESGSNLLITGPNGSGKSSLFRVLGGLWPL-MSGHIVKPGVGS 512
Query: 101 RDLTGAEIVPQFDVFTDSLTVMEQLVF------MTE-MKLGNSTKQPNKSILNTVIEEFK 153
VPQ +T T+ +QL++ TE + G L ++E +
Sbjct: 513 NLNKEIFYVPQ-RPYTAVGTLRDQLIYPLTADQETEPLSYGGMVDLLKNVDLEYLLERYP 571
Query: 154 LSAHVETXXXXXXXXXXXXXXXATSFLSNPQILICDEPTTGLDSYNASQVIGILKKLSAS 213
L V A F P+ I DE T+ + + + K++ A
Sbjct: 572 LDKEV-NWGDELSLGEQQRLGMARLFYHRPKFAILDECTSAVTTDMEER---FCKRVQAM 627
Query: 214 GKIVICSVHQPSCDIFKEFNSILLMAEG 241
G I H+P+ F+ I+L +G
Sbjct: 628 GTSCITISHRPA---LVAFHDIVLSLDG 652
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.135 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,150,661
Number of Sequences: 37544
Number of extensions: 319938
Number of successful extensions: 1298
Number of sequences better than 10.0: 139
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 952
Number of HSP's gapped (non-prelim): 280
length of query: 312
length of database: 14,793,348
effective HSP length: 82
effective length of query: 230
effective length of database: 11,714,740
effective search space: 2694390200
effective search space used: 2694390200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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