Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002711-TA|BGIBMGA002711-PA|IPR001806|Ras GTPase,
IPR013753|Ras, IPR000719|Protein kinase, IPR005225|Small GTP-binding
protein domain, IPR003577|Ras small GTPase, Ras type, IPR003579|Ras
small GTPase, Rab type, IPR003578|Ras small GTPase, Rho type,
IPR002041|GTP-binding nuclear protein Ran
(218 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 137 1e-33
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 114 8e-27
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 111 1e-25
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 109 2e-25
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 107 1e-24
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 106 3e-24
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 105 5e-24
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 93 4e-20
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 86 4e-18
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 80 3e-16
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 71 1e-13
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 60 3e-10
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 51 1e-07
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 50 3e-07
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 47 2e-06
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 45 1e-05
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 45 1e-05
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 42 9e-05
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 38 0.001
SPBC31F10.06c |sar1||ADP-ribosylation factor Sar1|Schizosaccharo... 35 0.008
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 32 0.075
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 32 0.075
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 29 0.40
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 29 0.70
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 27 2.1
SPAC1039.06 |||alanine racemase |Schizosaccharomyces pombe|chr 1... 26 3.7
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 26 3.7
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 26 3.7
SPBC119.15 |||AAA family ATPase, unknown biological role|Schizos... 25 6.5
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 25 6.5
SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28 |Schizo... 25 6.5
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 8.6
SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase Prp16|... 25 8.6
SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase protein... 25 8.6
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 137 bits (332), Expect = 1e-33
Identities = 67/178 (37%), Positives = 111/178 (62%), Gaps = 1/178 (0%)
Query: 5 AERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQ 64
A +++HL K++++GE G GKTSI+ +YV++ FS+ Y+ATIG DF K + D ++ LQ
Sbjct: 2 AGKKKHLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDK-VVTLQ 60
Query: 65 LWDIAGQERFGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDAKVQLPDGSAIPC 124
LWD AGQERF ++ +Y+ A +V+DV+ +F+ + W+++ + + P
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPF 120
Query: 125 ILLANKCDQQKEGIVNSPAKMDEYCREKGFAGWFETSAKENINIEEAARSLVNKILLN 182
ILL NK D +++ + S +K +C+ +G +FETSAKE IN++EA ++ L N
Sbjct: 121 ILLGNKVDVEEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLALEN 178
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 114 bits (275), Expect = 8e-27
Identities = 67/207 (32%), Positives = 118/207 (57%), Gaps = 6/207 (2%)
Query: 4 SAERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRL 63
SA++R L K++++G+ G GKT ++ ++V+Q FS+ Y+ATIG DF K + D ++ L
Sbjct: 2 SAQKRVFL-KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDK-LVTL 59
Query: 64 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDAKVQLPDGSAIP 123
QLWD AGQERF ++ +Y+ A IV++V+ +FD+V W+ + + D A P
Sbjct: 60 QLWDTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTS-QDECAFP 118
Query: 124 CILLANKCDQQKEGIVNSPAKMDEYCREKGFAGW--FETSAKENINIEEAARSLVNKILL 181
I++ N+ D+ S + +YC+ K + FE SAKEN N+ + + V+++ L
Sbjct: 119 FIIVGNQIDKDASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFET-VSRLAL 177
Query: 182 NDKLLQNNDTRDGDKFVIDHKIANGDS 208
++ +++ D + ++ K N S
Sbjct: 178 ENESSRDDFVNDFSEPLLLSKPLNNTS 204
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 111 bits (266), Expect = 1e-25
Identities = 59/175 (33%), Positives = 96/175 (54%), Gaps = 5/175 (2%)
Query: 13 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQE 72
K++++G+ GK+S++ R+V F + +TIG F + L D NT ++L++WD AGQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 73 RFGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDAKVQLPDGSAIPCILLANKCD 132
R+ ++ +YY+ A A +V+D+++ A+ + W +L Q P+G I L NK D
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQR--QAPEGIVI--ALAGNKLD 131
Query: 133 QQKEGIVNSPAKMDEYCREKGFAGWFETSAKENINIEEAARSLVNKILLNDKLLQ 187
+E A + Y E +FETSAK N+ E ++ K+ L DKL Q
Sbjct: 132 LAQERRAVEKADAEAYAAEANLL-FFETSAKTAENVNELFTAIAKKLPLEDKLNQ 185
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 109 bits (263), Expect = 2e-25
Identities = 61/183 (33%), Positives = 104/183 (56%), Gaps = 8/183 (4%)
Query: 6 ERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLN---WDSNTIIR 62
E ++L KI++ G GTGK+ +++R+V + T+G+DFA ++++ + I+
Sbjct: 4 ESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIK 63
Query: 63 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDAKVQLPDGSAI 122
LQ+WD AGQE+F ++ R YY+ A GA +V+DV+ +F+ + W +D+ A S I
Sbjct: 64 LQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAP----STI 119
Query: 123 PCILLANKCDQQKEGIVNSPAKMDEYCREKGFAGWFETSAKENINIEEAARSLVNKILLN 182
+L +K D Q + V S + E+C EK + ETS+ N+EE S+V+ I+
Sbjct: 120 CVVLAGSKSDLQNQRQV-STEEAAEFCSEKHISSAHETSSYTGSNVEECFLSVVSTIITR 178
Query: 183 DKL 185
+L
Sbjct: 179 IEL 181
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 107 bits (257), Expect = 1e-24
Identities = 62/187 (33%), Positives = 108/187 (57%), Gaps = 10/187 (5%)
Query: 9 EHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDI 68
++L+K ++IG+ G GK++++ R+ F+ ++TIGV+FA + + D N I+ Q+WD
Sbjct: 8 DYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLD-NKKIKAQIWDT 66
Query: 69 AGQERFGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDAKVQLPDGSAIPCILLA 128
AGQER+ +T YY+ AVGA IV+D+++ ++FD V +W +L S I +L+
Sbjct: 67 AGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHAD----SNIVIMLVG 122
Query: 129 NKCDQQKEGIVNSPAKMDEYCREKGFAGWFETSAKENINIEEAARSLVNKILLNDKLLQN 188
NK D V S + + E + + ETSA + N+EEA ++++ +I +++ N
Sbjct: 123 NKTDLLHLRAV-STEEAQAFAAENNLS-FIETSAMDASNVEEAFQTVLTEIF---RIVSN 177
Query: 189 NDTRDGD 195
GD
Sbjct: 178 RSLEAGD 184
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 106 bits (254), Expect = 3e-24
Identities = 56/176 (31%), Positives = 101/176 (57%), Gaps = 7/176 (3%)
Query: 4 SAERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRL 63
S + ++L K+L+IG+ G GK+ ++ R+ F+ + TIG+DF ++ + D I +L
Sbjct: 2 STKSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRI-KL 60
Query: 64 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDAKVQLPDGSAIP 123
Q+WD AGQERF +T YY+ A+G +++DV+ +FD V W ++++ +
Sbjct: 61 QIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHA----SENVY 116
Query: 124 CILLANKCDQQKEGIVNSPAKMDEYCREKGFAGWFETSAKENINIEEAARSLVNKI 179
IL+ NKCD + + V+ + + ++ + E SAK N+N++EA +L +I
Sbjct: 117 KILIGNKCDCEDQRQVS--FEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREI 170
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 105 bits (252), Expect = 5e-24
Identities = 58/172 (33%), Positives = 101/172 (58%), Gaps = 9/172 (5%)
Query: 9 EHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDI 68
++L+K+L+IG+ G GK+ ++ R+ +++ Y +TIGVDF ++ + T+ +LQ+WD
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTV-KLQIWDT 64
Query: 69 AGQERFGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDAKVQLPDGSAIPCILLA 128
AGQERF +T YY+ A G IV+DV+ +F+ V +W ++D + +L+
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAV----EGVNRLLVG 120
Query: 129 NKCDQQKEGIVN-SPAKMDEYCREKGFAGWFETSAKENINIEEAARSLVNKI 179
NK D + +V S AK E+ + ETSAK++ N+E+A ++ +I
Sbjct: 121 NKSDMVDKKVVEYSVAK--EFADSLNIP-FLETSAKDSTNVEQAFLTMSRQI 169
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 92.7 bits (220), Expect = 4e-20
Identities = 55/168 (32%), Positives = 92/168 (54%), Gaps = 7/168 (4%)
Query: 12 YKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQ 71
+K++ +GE GKTS+I R+++ F Y+ATIG+DF K + + T+ RLQLWD AGQ
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTV-RLQLWDTAGQ 70
Query: 72 ERFGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDAKVQLPDGSAIPCILLANKC 131
ERF ++ Y +++ A IV+D++ +F KW D+ A+ G + +L+ NK
Sbjct: 71 ERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAE----RGDDVIIVLVGNKT 126
Query: 132 DQQKEGIVNSPAKMDEYCREKGFAGWFETSAKENINIEEAARSLVNKI 179
D + V + + ++ +E ETSAK N++ R + +
Sbjct: 127 DLADKRQV-TQEEGEKKAKELKIM-HMETSAKAGHNVKLLFRKIAQML 172
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 85.8 bits (203), Expect = 4e-18
Identities = 57/175 (32%), Positives = 96/175 (54%), Gaps = 12/175 (6%)
Query: 12 YKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNT-IIRLQLWDIAG 70
+K++++G+ GTGKT+ +KR++ F + Y AT+GV+ + L++ +N I +WD AG
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVE--VHPLHFHTNFGEICFNVWDTAG 67
Query: 71 QERFGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDAKVQLPDGSAIPCILLANK 130
QE+ G + YY + I+FDV+ T+ V W DL V++ + IP +L NK
Sbjct: 68 QEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDL---VRVCEN--IPIVLCGNK 122
Query: 131 CDQQKEGIVNSPAKMDEYCREKGFAGWFETSAKENINIEEAARSLVNKILLNDKL 185
D ++ + AK + R+K +++ SAK N N E+ L K++ N L
Sbjct: 123 VDVKERKV---KAKAITFHRKKNLQ-YYDISAKSNYNFEKPFLWLARKLVGNPNL 173
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 79.8 bits (188), Expect = 3e-16
Identities = 51/168 (30%), Positives = 88/168 (52%), Gaps = 7/168 (4%)
Query: 12 YKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQ 71
YK++V+G+ G GK+++ + + F Y TI D K D + L + D AGQ
Sbjct: 9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIE-DSYRKKCEIDGEGAL-LDVLDTAGQ 66
Query: 72 ERFGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDAKVQLPDGSAIPCILLANKC 131
E + M Y + G +V++++ ++FD + + + +++ D P +L+ANKC
Sbjct: 67 EEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQI---LRVKDKDTFPVVLVANKC 123
Query: 132 DQQKEGIVNSPAKMDEYCREKGFAGWFETSAKENINIEEAARSLVNKI 179
D + E +V S A+ ++ + + ETSAK +N+EEA SLV I
Sbjct: 124 DLEAERVV-SRAEGEQLAKSM-HCLYVETSAKLRLNVEEAFYSLVRTI 169
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 70.9 bits (166), Expect = 1e-13
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Query: 3 ASAERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIR 62
A A + K+ +IG+ GKTS++ YV F + T+GV+F K ++ NT I
Sbjct: 2 ADARKNNVTIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISI-RNTEIT 60
Query: 63 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKW 106
+WD+ GQ F NM + +AV +FD+SR +T +++ +W
Sbjct: 61 FSIWDLGGQREFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEW 104
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 59.7 bits (138), Expect = 3e-10
Identities = 52/184 (28%), Positives = 90/184 (48%), Gaps = 24/184 (13%)
Query: 1 ASASAERREHLY-KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNT 59
+S +++ +Y KI+++G+ GKTS++ + +F Q Y TI ++ + D N+
Sbjct: 2 SSCFGSKKKPIYRKIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIF-VDGNS 60
Query: 60 IIRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDV-SRVATFDAVVKWKNDLDAKVQLPD 118
I L LWD AGQE + + + Y + I F V SR + + + KW ++ +
Sbjct: 61 -IELSLWDTAGQEEYDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNC---- 115
Query: 119 GSAIPCILLANKCD---QQKEGIVNSPAKMDEYCREKGFAG--------WFETSAKENIN 167
+ +L+A KCD +E + +S K+ +Y E+G A + E SAK N
Sbjct: 116 -PGVKLVLVALKCDLRGADEEQVDHS--KIIDY--EEGLAAAKKINAVRYLECSAKLNRG 170
Query: 168 IEEA 171
+ EA
Sbjct: 171 VNEA 174
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 51.2 bits (117), Expect = 1e-07
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Query: 4 SAERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRL 63
S + E K++V+G+ G GKT ++ + F + Y T+ ++ + ++ +I L
Sbjct: 7 SGSKSETSKKLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIEL 66
Query: 64 QLWDIAGQERFGNMTRVYYKEAVGAFIVFDVSRVATFDAVV-KW 106
LWD AGQE + + + Y + + F + A+ + V KW
Sbjct: 67 ALWDTAGQEEYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKW 110
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 50.0 bits (114), Expect = 3e-07
Identities = 40/168 (23%), Positives = 79/168 (47%), Gaps = 9/168 (5%)
Query: 13 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQE 72
+I V+G GK+S+ +YV F + Y TI F+ K + + ++ D AGQ+
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFS-KNIKYKGQE-FATEIIDTAGQD 65
Query: 73 RFGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDAKVQLPDGSA-IPCILLANKC 131
+ + + G +V+ ++ ++F+ +VK D K+ G+ +P +++ NK
Sbjct: 66 EYSILNSKHSIGIHGYVLVYSITSKSSFE-MVKIVRD---KILNHTGTEWVPIVVVGNKS 121
Query: 132 DQQKEGIVNSPAKMDEYCREKGFAGWFETSAKENINIEEAARSLVNKI 179
D + V A+ + + W E SA+ N N+ A ++++I
Sbjct: 122 DLHMQRAVT--AEEGKALANEWKCAWTEASARHNENVARAFELIISEI 167
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 46.8 bits (106), Expect = 2e-06
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 19/184 (10%)
Query: 13 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQE 72
K++++G+ GKT ++ + F + Y T+ ++ V D + L LWD AGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADV-EVDGRHV-ELALWDTAGQE 65
Query: 73 RFGNMTRVYYKEAVGAFIVFDVSRVATFDAV-VKWKNDLDAKVQLPDGSAIPCILLANKC 131
+ + + Y ++ I F V + D V KW +++ L S++P +L+A K
Sbjct: 66 DYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEV-----LHFCSSLPILLVACKA 120
Query: 132 DQQKE-GIVNSPAKMDEY--CREKGFA--------GWFETSAKENINIEEAARSLVNKIL 180
D + + I+ +K +++ E+G A + E SAK N + E S +
Sbjct: 121 DLRNDPKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVFESATRAAM 180
Query: 181 LNDK 184
L K
Sbjct: 181 LKHK 184
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 44.8 bits (101), Expect = 1e-05
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 13 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQE 72
K +V+G+ GKT ++ Y F Y T+ ++A+ V+ D L L+D AGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEP--YTLGLFDTAGQE 62
Query: 73 RFGNMTRVYYKEAVGAFIVFDVSRVATFDAV-VKWKNDLDAKVQLPDGSAIPCILLANKC 131
+ + + Y + + F V+ A+F+ V KW ++ +PC+++ +
Sbjct: 63 DYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHC-----PGVPCLIVGTQI 117
Query: 132 D 132
D
Sbjct: 118 D 118
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 44.8 bits (101), Expect = 1e-05
Identities = 31/127 (24%), Positives = 63/127 (49%), Gaps = 8/127 (6%)
Query: 13 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQE 72
K++V+G+ GKTS++ + +F Y T+ ++ + D ++ +L LWD AGQE
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENY-VSDCRVDGKSV-QLALWDTAGQE 67
Query: 73 RFGNMTRVYYKEAVGAFIVFDVSRVATFDAV-VKWKNDLDAKVQLPDGSAIPCILLANKC 131
+ + + Y +A + F + + + V KW +++ P+ +P IL+ K
Sbjct: 68 EYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEIN--TLCPN---VPFILVGMKA 122
Query: 132 DQQKEGI 138
D + + +
Sbjct: 123 DLRSDPV 129
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 41.5 bits (93), Expect = 9e-05
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 8/125 (6%)
Query: 13 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQE 72
K++++G+ GKT ++ + F + Y T+ ++ V D I L LWD AGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADV-EVDGRHI-ELALWDTAGQE 65
Query: 73 RFGNMTRVYYKEAVGAFIVFDVSRVATFDAV-VKWKNDLDAKVQLPDGSAIPCILLANKC 131
+ + + Y ++ I F V + D V KW +++ L S +P +L+ K
Sbjct: 66 DYDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEV-----LHFCSNLPILLVGCKV 120
Query: 132 DQQKE 136
D + +
Sbjct: 121 DLRND 125
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 37.9 bits (84), Expect = 0.001
Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 12/174 (6%)
Query: 8 REHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWD 67
+E ++L++G GKT+I+K +++ ++ T G F ++ L + +R +WD
Sbjct: 13 KEREVRVLLLGLDNAGKTTILKCLLNEDVNE-VSPTFG--FQIRTLEVEG---LRFTIWD 66
Query: 68 IAGQERFGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDAKVQLPDGSAIPCILL 127
I GQ+ N + Y++ V D + +L + +L S ++L
Sbjct: 67 IGGQKTLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELLVEEKLLFTS---ILVL 123
Query: 128 ANKCDQQKEGIVNSPAKMDEYCREKGFAGW--FETSAKENINIEEAARSLVNKI 179
ANK D +K+ + K + W F SA +NI++A L N +
Sbjct: 124 ANKSDVSGALSSEEISKILNISKYKS-SHWRIFSVSALTGLNIKDAISWLANDL 176
>SPBC31F10.06c |sar1||ADP-ribosylation factor
Sar1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 190
Score = 35.1 bits (77), Expect = 0.008
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 61 IRLQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDAKVQLPDGS 120
+R +D+ G ++ + R Y+ E G + D F+ + + K +LDA + + + +
Sbjct: 64 VRFTTFDLGGHQQARRLWRDYFPEVNGIVYLVDC---CDFERLSESKAELDALLAMEELA 120
Query: 121 AIPCILLANKCD 132
+P ++L NK D
Sbjct: 121 RVPFLILGNKID 132
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 31.9 bits (69), Expect = 0.075
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 10/132 (7%)
Query: 13 KILVIGELGTGKTSIIKRYVHQFFSQHYRAT-IGVDFALKVLNWDSNTIIRLQLWDIAGQ 71
K+L++G G+GK+S+ + ++ R +D + + N + L LWD GQ
Sbjct: 4 KVLLMGRSGSGKSSMRSIVFSNYVAKDTRRLGATIDIEHSHVRFLGNLV--LNLWDCGGQ 61
Query: 72 ERFG----NMTRVYYKEAVGAFI-VFDVSRVATFDAVVKWKNDLDAKVQLPDGSAIPCIL 126
E F + R + V I VFDV +V ++N L+A V + + C++
Sbjct: 62 EAFMENYLSAQRDHIFRNVQVLIYVFDVESREFERDLVTFRNCLEATVANSPQARVFCLI 121
Query: 127 LANKCDQQKEGI 138
+K D +E +
Sbjct: 122 --HKMDLVQEDL 131
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 31.9 bits (69), Expect = 0.075
Identities = 31/135 (22%), Positives = 61/135 (45%), Gaps = 12/135 (8%)
Query: 13 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQE 72
+IL++G GKT+I+ + +Q V F ++ + + + I+ +WD+ GQ+
Sbjct: 23 RILMLGLDAAGKTTILYKLK---LNQSVVTIPTVGFNVETVTYKN---IKFNVWDVGGQD 76
Query: 73 RFGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDAKVQLPDGSAIPCILLANKCD 132
+ + R Y+ G V D A + + + + +L + D C+LL
Sbjct: 77 KIRPLWRHYFTGTKGLIFVVD---SADSNRISEARQELHRIIS--DREMRDCLLLVLANK 131
Query: 133 QQKEGIVNSPAKMDE 147
Q G + SPA++ +
Sbjct: 132 QDLPGAL-SPAQITD 145
>SPBC4F6.18c |arf1||ADP-ribosylation factor
Arf1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 180
Score = 29.5 bits (63), Expect = 0.40
Identities = 18/81 (22%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 13 KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQE 72
+IL++G GKT+I+ + + + F ++ + + + I +WD+ GQ+
Sbjct: 19 RILMVGLDAAGKTTILYKLK---LGEIVTTIPTIGFNVETVEYRN---ISFTVWDVGGQD 72
Query: 73 RFGNMTRVYYKEAVGAFIVFD 93
+ + R Y++ G V D
Sbjct: 73 KIRPLWRHYFQNTQGIIFVVD 93
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 28.7 bits (61), Expect = 0.70
Identities = 14/41 (34%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 163 KENINIEEAARSLVNKI-LLNDKLLQNNDTRDGDKFVIDHK 202
K+N +I++ RS+VN + +K+L+N+ +R+ F+ID +
Sbjct: 2195 KKN-DIQQLERSIVNASNMKEEKMLKNHHSREMSSFIIDER 2234
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 27.1 bits (57), Expect = 2.1
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 117 PDGSAIPCILLANKCDQQKEGIVNSPAKMDEYCREKG 153
PD IPC+ A K D ++ P + DE+ ++ G
Sbjct: 515 PDLQKIPCVFAATKADLDRQQ-QRYPVQPDEFTKQLG 550
>SPAC1039.06 |||alanine racemase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 415
Score = 26.2 bits (55), Expect = 3.7
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 89 FIVFDVSRVATFDAVVKWKNDLDAKVQLPDGSAIPCILLANKC 131
F F V R++ ++K K D K LPD S + CI+ + C
Sbjct: 348 FESFYVDRLSQEHGILKSK---DPKATLPDASQVLCIIPNHSC 387
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 26.2 bits (55), Expect = 3.7
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 145 MDEYCREKGFAGWFETSAKENINIEEAARSLVNKILLNDKLLQNNDTRDGDKFVIDHKIA 204
MD+Y RE+ G FE A ++ ++ SL ++ DK N +RD D
Sbjct: 1 MDQYWREQEGRGLFEDDANSYVSDDDTMSSLTR--MIYDK----NSSRDALHSDYDSSSF 54
Query: 205 NGDSRDGANKA 215
N DS A A
Sbjct: 55 NVDSSSVAYPA 65
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 26.2 bits (55), Expect = 3.7
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 6 ERREHLYKILVIGELGTGKTSIIKRYVHQFFSQHYRATIG 45
E +E+ ILV GE G GKT KR + + T+G
Sbjct: 159 ENKEN-QSILVTGESGAGKTENTKRIIQYLAAIASSTTVG 197
>SPBC119.15 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 25.4 bits (53), Expect = 6.5
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 14 ILVIGELGTGKTSIIKRYVHQFFSQHYRATI-GVDFALKVLNWDSNTIIR 62
I+V+G G+GKT+ +++ S++ I +D A++ L +++N IR
Sbjct: 11 IIVVGMAGSGKTTFMQQLNAHLHSKNKPPYILNLDPAVRNLPYEANIDIR 60
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 25.4 bits (53), Expect = 6.5
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 151 EKGFAGWFETSAKENINIEEAARSLVNKILLNDKLLQNN 189
E G W E S + + + R ++ ++L ++QNN
Sbjct: 243 EDGPFQWIERSFPSQVQLANSRREILARLLTRFSMIQNN 281
>SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1055
Score = 25.4 bits (53), Expect = 6.5
Identities = 7/21 (33%), Positives = 17/21 (80%)
Query: 14 ILVIGELGTGKTSIIKRYVHQ 34
+L++ E G+GKT+ + +++H+
Sbjct: 437 LLIVAETGSGKTTQLPQFLHE 457
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.0 bits (52), Expect = 8.6
Identities = 9/16 (56%), Positives = 14/16 (87%)
Query: 14 ILVIGELGTGKTSIIK 29
+L++GE GTGKT+ I+
Sbjct: 470 LLLVGETGTGKTTTIQ 485
>SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase
Prp16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 25.0 bits (52), Expect = 8.6
Identities = 7/21 (33%), Positives = 18/21 (85%)
Query: 14 ILVIGELGTGKTSIIKRYVHQ 34
++V+GE G+GKT+ + +++++
Sbjct: 511 LIVVGETGSGKTTQLAQFLYE 531
>SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 758
Score = 25.0 bits (52), Expect = 8.6
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 13 KILVIGELGTGKTSIIKRYVHQ 34
KIL+ G+L GK+++ VH+
Sbjct: 156 KILITGDLNAGKSTLCNALVHK 177
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.136 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 977,917
Number of Sequences: 5004
Number of extensions: 38903
Number of successful extensions: 194
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 134
Number of HSP's gapped (non-prelim): 38
length of query: 218
length of database: 2,362,478
effective HSP length: 70
effective length of query: 148
effective length of database: 2,012,198
effective search space: 297805304
effective search space used: 297805304
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 52 (25.0 bits)
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