GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002711-TA|BGIBMGA002711-PA|IPR001806|Ras GTPase,
IPR013753|Ras, IPR000719|Protein kinase, IPR005225|Small GTP-binding
protein domain, IPR003577|Ras small GTPase, Ras type, IPR003579|Ras
small GTPase, Rab type, IPR003578|Ras small GTPase, Rho type,
IPR002041|GTP-binding nuclear protein Ran
         (218 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            87   5e-19
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    44   3e-06
DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       29   0.11 
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   4.1  
DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.       23   7.1  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 86.6 bits (205), Expect = 5e-19
 Identities = 48/172 (27%), Positives = 90/172 (52%), Gaps = 7/172 (4%)

Query: 12  YKILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQ 71
           +K++++GE   GK+S++ R+V   F ++  +TIG  F  + L  D  T+ + ++WD AGQ
Sbjct: 25  FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTV-KFEIWDTAGQ 83

Query: 72  ERFGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDAKVQLPDGSAIPCILLANKC 131
           ER+ ++  +YY+ A  A +V+D+    +F     W  +L  +   P+   I   L  NK 
Sbjct: 84  ERYHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQAS-PN---IVIALAGNKA 139

Query: 132 DQQKEGIVNSPAKMDEYCREKGFAGWFETSAKENINIEEAARSLVNKILLND 183
           D     +V+   +  +Y  +     + ETSAK  +N+ +   ++  K+  N+
Sbjct: 140 DLANSRVVDY-EEAKQYADDNRLL-FMETSAKTAVNVNDIFLAIAKKLPKNE 189


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 44.4 bits (100), Expect = 3e-06
 Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 8/125 (6%)

Query: 13  KILVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVLNWDSNTIIRLQLWDIAGQE 72
           K +V+G+   GKT ++  Y    F   Y  T   +++  ++       + L LWD AGQE
Sbjct: 8   KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMVV--DGVQVSLGLWDTAGQE 65

Query: 73  RFGNMTRVYYKEAVGAFIVFDVSRVATFDAVV-KWKNDLDAKVQLPDGSAIPCILLANKC 131
            +  +  + Y +     I + V+  ++F+ V  KW  ++  K   PD    P IL+  K 
Sbjct: 66  DYDRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEI--KHHCPDA---PIILVGTKI 120

Query: 132 DQQKE 136
           D +++
Sbjct: 121 DLRED 125


>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 29.1 bits (62), Expect = 0.11
 Identities = 13/60 (21%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 151 EKGFAGWFETSAKENINIEEAARSLVNKILLNDKLLQNNDTRDGDKFVIDHKIANGDSRD 210
           E+ +A       + + N +E   SL + +++ +++++ ++  DGD  V++    N +S+D
Sbjct: 70  EQNYAVEVRDIERNDYNFDEPKTSL-DPVVVEEEIIEESNGPDGDNLVLEQGSNNSNSKD 128


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 8/71 (11%)

Query: 100 FDAVVKWKNDLDAKVQLPDGSAIPCILLANKCDQQKEGIVNSPAKMDEYCREKGFAGWFE 159
           +D +V+ K D  A+++L  GS++     + K  +Q + +VN   K++  C E+  +  +E
Sbjct: 591 YDPLVEGKGDRLARIELSSGSSV-----SFKYSEQNK-LVN--FKVNTTCYEQNVSFEYE 642

Query: 160 TSAKENINIEE 170
            +  + IN E+
Sbjct: 643 GNWLKQINQED 653


>DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 10/28 (35%), Positives = 18/28 (64%)

Query: 3  ASAERREHLYKILVIGELGTGKTSIIKR 30
          A  ER     K+L++G   +GK++I+K+
Sbjct: 24 ADGERAASEVKLLLLGAGESGKSTIVKQ 51


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.136    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,966
Number of Sequences: 2123
Number of extensions: 8203
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 14
Number of HSP's gapped (non-prelim): 5
length of query: 218
length of database: 516,269
effective HSP length: 61
effective length of query: 157
effective length of database: 386,766
effective search space: 60722262
effective search space used: 60722262
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 46 (22.6 bits)