Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002710-TA|BGIBMGA002710-PA|undefined
(58 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067608-15|AAO38679.1| 470|Caenorhabditis elegans Hypothetical... 27 1.6
AF067608-14|AAK95864.1| 551|Caenorhabditis elegans Hypothetical... 27 1.6
AF016430-8|AAK95868.2| 200|Caenorhabditis elegans Hypothetical ... 27 2.1
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 26 3.6
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 26 3.6
Z92788-8|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 26 3.6
Z92788-7|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 26 3.6
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 26 3.6
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 26 3.6
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 26 3.6
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 26 3.6
AL034391-1|CAA22302.2| 333|Caenorhabditis elegans Hypothetical ... 25 6.3
L12018-2|AAK68341.1| 525|Caenorhabditis elegans G protein regul... 25 8.4
>AF067608-15|AAO38679.1| 470|Caenorhabditis elegans Hypothetical
protein B0511.14b protein.
Length = 470
Score = 27.1 bits (57), Expect = 1.6
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Query: 4 MEEARDMARFLQGLEAELDPRRSGHNGYFPDIRKCLALHAATGCRHKAA 52
M E RDM L+G E LD RR P +R+ +A + A RH A
Sbjct: 121 MIELRDMGYNLRGSERALDGRRE------PSVREEIAANMARARRHLEA 163
>AF067608-14|AAK95864.1| 551|Caenorhabditis elegans Hypothetical
protein B0511.14a protein.
Length = 551
Score = 27.1 bits (57), Expect = 1.6
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Query: 4 MEEARDMARFLQGLEAELDPRRSGHNGYFPDIRKCLALHAATGCRHKAA 52
M E RDM L+G E LD RR P +R+ +A + A RH A
Sbjct: 121 MIELRDMGYNLRGSERALDGRRE------PSVREEIAANMARARRHLEA 163
>AF016430-8|AAK95868.2| 200|Caenorhabditis elegans Hypothetical
protein C05C8.1 protein.
Length = 200
Score = 26.6 bits (56), Expect = 2.1
Identities = 15/40 (37%), Positives = 18/40 (45%)
Query: 19 AELDPRRSGHNGYFPDIRKCLALHAATGCRHKAALLAMNN 58
A+LDPR S N IR A GCRH L + +
Sbjct: 77 AQLDPRLSQDNVTLETIRAVNASVTGFGCRHFEGLTGIKS 116
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 25.8 bits (54), Expect = 3.6
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 5 EEARDMARFLQGLEAELDPRRSGHNGYFPDIRKCLALHAATGCRHKAALLAMN 57
++ + + + LQG +AELD + + P++ L L T R A + A+N
Sbjct: 2459 DQVQALEQRLQGDQAELDELLASDKAHDPEVCDALKLVELTMARRLADVDALN 2511
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 25.8 bits (54), Expect = 3.6
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 5 EEARDMARFLQGLEAELDPRRSGHNGYFPDIRKCLALHAATGCRHKAALLAMN 57
++ + + + LQG +AELD + + P++ L L T R A + A+N
Sbjct: 2459 DQVQALEQRLQGDQAELDELLASDKAHDPEVCDALKLVELTMARRLADVDALN 2511
>Z92788-8|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 25.8 bits (54), Expect = 3.6
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 5 EEARDMARFLQGLEAELDPRRSGHNGYFPDIRKCLALHAATGCRHKAALLAMN 57
++ + + + LQG +AELD + + P++ L L T R A + A+N
Sbjct: 2459 DQVQALEQRLQGDQAELDELLASDKAHDPEVCDALKLVELTMARRLADVDALN 2511
>Z92788-7|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 25.8 bits (54), Expect = 3.6
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 5 EEARDMARFLQGLEAELDPRRSGHNGYFPDIRKCLALHAATGCRHKAALLAMN 57
++ + + + LQG +AELD + + P++ L L T R A + A+N
Sbjct: 2459 DQVQALEQRLQGDQAELDELLASDKAHDPEVCDALKLVELTMARRLADVDALN 2511
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 25.8 bits (54), Expect = 3.6
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 5 EEARDMARFLQGLEAELDPRRSGHNGYFPDIRKCLALHAATGCRHKAALLAMN 57
++ + + + LQG +AELD + + P++ L L T R A + A+N
Sbjct: 2459 DQVQALEQRLQGDQAELDELLASDKAHDPEVCDALKLVELTMARRLADVDALN 2511
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 25.8 bits (54), Expect = 3.6
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 5 EEARDMARFLQGLEAELDPRRSGHNGYFPDIRKCLALHAATGCRHKAALLAMN 57
++ + + + LQG +AELD + + P++ L L T R A + A+N
Sbjct: 2459 DQVQALEQRLQGDQAELDELLASDKAHDPEVCDALKLVELTMARRLADVDALN 2511
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 25.8 bits (54), Expect = 3.6
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 5 EEARDMARFLQGLEAELDPRRSGHNGYFPDIRKCLALHAATGCRHKAALLAMN 57
++ + + + LQG +AELD + + P++ L L T R A + A+N
Sbjct: 2459 DQVQALEQRLQGDQAELDELLASDKAHDPEVCDALKLVELTMARRLADVDALN 2511
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 25.8 bits (54), Expect = 3.6
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 5 EEARDMARFLQGLEAELDPRRSGHNGYFPDIRKCLALHAATGCRHKAALLAMN 57
++ + + + LQG +AELD + + P++ L L T R A + A+N
Sbjct: 2459 DQVQALEQRLQGDQAELDELLASDKAHDPEVCDALKLVELTMARRLADVDALN 2511
>AL034391-1|CAA22302.2| 333|Caenorhabditis elegans Hypothetical
protein Y40H4A.2 protein.
Length = 333
Score = 25.0 bits (52), Expect = 6.3
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 29 NGYFPDIRKCLALHAATGCRH 49
+G+F D+R+ +H A G H
Sbjct: 87 HGHFGDLRRIFGIHGAPGISH 107
>L12018-2|AAK68341.1| 525|Caenorhabditis elegans G protein
regulator protein 1 protein.
Length = 525
Score = 24.6 bits (51), Expect = 8.4
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 13 FLQGLEAELDPRRSGHNGYFPDIRKCLA-LHAATGCRHKAA 52
+L GLEA + R+ G N Y D+ +A A G R +AA
Sbjct: 286 YLYGLEALVSIRKLGLNEYIGDVLLTIAKCLIALGKRRQAA 326
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.326 0.136 0.422
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,315,516
Number of Sequences: 27539
Number of extensions: 33543
Number of successful extensions: 69
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 59
Number of HSP's gapped (non-prelim): 13
length of query: 58
length of database: 12,573,161
effective HSP length: 39
effective length of query: 19
effective length of database: 11,499,140
effective search space: 218483660
effective search space used: 218483660
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 51 (24.6 bits)
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