Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002708-TA|BGIBMGA002708-PA|IPR007265|Sec34-like protein
(785 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1539.05 |cog3||Golgi transport complex subunit Cog3 |Schizos... 83 2e-16
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 35 0.050
SPAC2C4.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 34 0.087
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 33 0.12
SPAC926.02 |||conserved fungal protein|Schizosaccharomyces pombe... 33 0.12
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 31 0.47
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo... 31 0.47
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 31 0.62
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 31 0.62
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 31 0.81
SPBC16D10.04c |dna2||DNA replication endonuclease-helicase Dna2|... 29 3.3
SPCC338.13 |cog4||Golgi transport complex subunit Cog4 |Schizosa... 29 3.3
SPBC16A3.02c |||mitochondrial peptidase |Schizosaccharomyces pom... 29 3.3
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 29 3.3
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 28 4.3
SPAC2F3.06c |kap104||karyopherin Kap104|Schizosaccharomyces pomb... 28 4.3
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 28 5.7
SPCC1840.08c |||protein disulfide isomerase |Schizosaccharomyces... 28 5.7
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch... 28 5.7
SPBC30D10.03c |||IMP 5'-nucleotidase |Schizosaccharomyces pombe|... 28 5.7
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 28 5.7
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 28 5.7
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 27 7.6
>SPBC1539.05 |cog3||Golgi transport complex subunit Cog3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 735
Score = 82.6 bits (195), Expect = 2e-16
Identities = 77/321 (23%), Positives = 142/321 (44%), Gaps = 37/321 (11%)
Query: 308 DECALYHHFFTQSSQALEEYLQSLCNGLYETLRPHIIHINHLETLAELCVILRI--EVIE 365
DE L+ Y +LC +E R I+H +L L E+C ++ I
Sbjct: 351 DENKLFREILIMDDFRFMHYWNNLCQSFFENSRSLILHEKNLTELCEVCSYIQSFQNAIL 410
Query: 366 EQVNNDPVSLRALGTCAGALLQDAAERLVFRAHVHLRADVLLYRPAPGDLAYPNKLLMME 425
E D V + + L+ + ERL+F + D+ Y P DL N + +
Sbjct: 411 EGERED-VDKKVV-EFLNPLVLELQERLLFVVQTAIETDIQRYSPTEEDL---NPIADDK 465
Query: 426 QIALSIQEQSLKRSDSRNSMVSDVSATSQEVANINVEAQRRPHASPADLHGMWYPTVRRT 485
+ +++ L+ ++ + DV Q++A AQ WYP V+++
Sbjct: 466 SLLFDLEK--LRLNNDEEKLDPDVP---QKLAM----AQG------------WYPVVQKS 504
Query: 486 LAALSRLYRCLEKRVFQGLAQEAISLCVQSVDTAARLITANATSVDGELFQIKHLLILRE 545
L LS++YR + +VF +A E + C++S+ A R + N LF IK+ L+L++
Sbjct: 505 LIILSKIYRLVNSQVFDEIALELVHSCIRSLVDAYRYFSRNNDKQLARLFLIKNFLVLKD 564
Query: 546 QIAPFQVDFVIKETTLDFSNVKNAAYGLIQRPRQIFSLSSNNALLEFLLEGTPMVREHLL 605
Q+ F + + E +D V + ++ R S+ +L+ + E P + +
Sbjct: 565 QLNSFDIHYACIEAGVDLRKV----WDSVREWR-----SNLRGVLQLVYETFPKFITNAV 615
Query: 606 DSRKEVDRQLKSCCETFIKNA 626
D+R+E+++QL+ +I+ A
Sbjct: 616 DTRQELNQQLRVAVNGYIETA 636
Score = 71.3 bits (167), Expect = 5e-13
Identities = 42/172 (24%), Positives = 82/172 (47%), Gaps = 4/172 (2%)
Query: 112 QINEAMSDLHKLTEQYNFVSNKTNALHNMSEQLLADQNKLSGIGDDIKKRLHYFTQVEHL 171
Q N S L + E++ K + M E L D+ + S I D I+K L F ++ L
Sbjct: 121 QTNNIESTLLSMKEKFESSEKKLSEFSEMCENLSTDEMRFSEIADGIRKGLTIFAPLKEL 180
Query: 172 SQRLNSPTMSVNSDAFFNV-LAKIDECLDYMRENSNYKESHTYLVKYRHLQNRAISVIRS 230
++ P F + +++ C+ ++ EN +++ES YL +Y+ L ++A+ + +
Sbjct: 181 TRVFRHPPPDFAGKVSFKEHITQLNTCIMFLEENLDFQESPHYLGQYKKLLSQAMDIFKP 240
Query: 231 YVNHVLDHATEQVLGPQEDAGSEEENVDTAYAVFFGKFQAAAPKLRKVIGEI 282
Y ++ T+QVL +D+ + + ++F+ +F A L I E+
Sbjct: 241 YFIRIIKQTTDQVL---KDSKKMDVHKQLHSSLFYARFSAVGHNLCPTITEL 289
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 34.7 bits (76), Expect = 0.050
Identities = 66/299 (22%), Positives = 130/299 (43%), Gaps = 33/299 (11%)
Query: 5 SLKEIQSKLLL-WESSENPL-APLNSDQREAILDLESLILGVNDEGGENGPIEKETVDQK 62
S ++ Q+K + +E E L A LNS E L +S ++ D+ N + ++ +QK
Sbjct: 448 SERDFQNKKIKDFEKIEQDLRACLNSSSNE--LKEKSALIDKKDQELNN--LREQIKEQK 503
Query: 63 SIPSVDTTYDFLEWYERLCDDNMKTEDVPYQCYYKQLEDRRNECISLNEQINEAMSDLHK 122
+ ++T L+ +R + K +V Y+ +L+ IS +E ++ +S L
Sbjct: 504 KVS--ESTQSSLQSLQRDILNEKKKHEV-YESQLNELKGELQTEISNSEHLSSQLSTLAA 560
Query: 123 LTEQYNFVSNKTNALHNMSEQLL-ADQNKLSGIGDDIKKRLHYFTQVEHLSQRLNSPTMS 181
E +N+ + N + L A Q KL+ +K+ F+ ++ ++LN
Sbjct: 561 EKEAAVATNNELSESKNSLQTLCNAFQEKLAKSVMQLKENEQNFSSLDTSFKKLNESHQE 620
Query: 182 V--NSDAFFNVLAKIDECLDYMR-ENSNYKESHTYLVKYRH-LQNRAISVIRSYVNHVLD 237
+ N L L ++ E +N+++ + L + L+ + + L+
Sbjct: 621 LENNHQTITKQLKDTSSKLQQLQLERANFEQKESTLSDENNDLRTKLLK---------LE 671
Query: 238 HATEQVLGPQEDAGSEEENVDT--------AYAVFFGKFQAAAPKLRKVIGEIEQRAET 288
+ + ++ QED S E+N+ T A+ F K + A LR+VI ++ + ET
Sbjct: 672 ESNKSLIKKQEDVDSLEKNIQTLKEDLRKSEEALRFSKLE--AKNLREVIDNLKGKHET 728
>SPAC2C4.10c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 166
Score = 33.9 bits (74), Expect = 0.087
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 94 CYYKQLEDRRNECISLNEQINEAMSDLHK-LTEQYNFVSNKTNALHNMSEQLLADQNKL 151
CY K ++D + +NE M+ HK + Y ++++ N+L+ ++EQ + NK+
Sbjct: 96 CYAKGMDDIMKHVATYTATMNERMNACHKEYIKMYEALASERNSLYKINEQNVQSLNKV 154
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 33.5 bits (73), Expect = 0.12
Identities = 41/174 (23%), Positives = 74/174 (42%), Gaps = 8/174 (4%)
Query: 18 SSENPLAPLNSDQREAILDLESLILGVNDEGGENGPIEKETVDQKSIPSVDTTYDFLEWY 77
S EN + LN + +LE++ D E + + ++Q + + + Y
Sbjct: 1328 SKENLIEELNQEIGHLKSELETVKSKSEDLENERAQNQSK-IEQLELKNTKLAAAWRTKY 1386
Query: 78 ERLCDDNM-KTEDVPYQCYYK--QLEDRRNECISLNEQINEAMSDLHKLTEQYNFVSNKT 134
E++ + ++ K + Q K +LE + EC LNEQ+N+ S T Q +
Sbjct: 1387 EQVVNKSLEKHNQIRQQLSQKTSELEAKVAECHQLNEQLNKP-SATPTATTQSEPSTVSL 1445
Query: 135 NALHNMSEQLLADQNKLSGIGDDI---KKRLHYFTQVEHLSQRLNSPTMSVNSD 185
++ E+L + Q KLS I D + K+ L Q + S+ + T N +
Sbjct: 1446 EEFNSTKEELSSTQRKLSEIMDILNTTKEELEKVRQNSNKSEGTSKDTEIPNEE 1499
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 110 NEQINEAMSDLHKLTEQYNFVSNKTNALHNMSEQLLADQNKL 151
+E +E + KLT Q + +N T L+N +QLL +N L
Sbjct: 296 SELQSEVAALQEKLTSQQSLYNNVTEELNNNKQQLLISENSL 337
>SPAC926.02 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 443
Score = 33.5 bits (73), Expect = 0.12
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Query: 385 LLQDAAERLVFRAHVHLRADVLLYRPAPGDLAYPNKLLMMEQIALSIQEQSLKRSDSRNS 444
LLQ+A + A VHL + DLAYP ++ I+ SI Q +R + N+
Sbjct: 111 LLQEAPDIWFNLAQVHLNLAEIWVDLDREDLAYPEIQQALQSISHSIDLQERERIEWENT 170
Query: 445 MVSDVSATSQEVANINVEAQRRPHASPADLHGMWYPTVRRTLAALSRLYRCLEKRVFQGL 504
+ + +E+ +I RR + AD T+ +A+L+ + LE+ F+ L
Sbjct: 171 IQTSSQQKYEEIPDIQA---RRLYFIEADKEA---STLVTEIASLACSCKLLEESDFEKL 224
Query: 505 AQ 506
Q
Sbjct: 225 CQ 226
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 31.5 bits (68), Expect = 0.47
Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 2/111 (1%)
Query: 664 VVKEVQKRIKAHLAPLQRSMQLYLANKETEFILFKPIRNNVVGYFVQIEQLLVNAGYSYE 723
V E+ A L S Q+ +NK +EF+ G L +G S
Sbjct: 614 VTSEISSTSLASLISTLTSQQIS-SNKSSEFVGQTTTEYTTSGSVGFTTTLATQSG-SVP 671
Query: 724 DTLIVACPTPEQISVFISSASLISHSEPVLPYGTKAKPSVVRKPSVTSVPE 774
T++V PTP I+ ++S S+ + P GT A +V P+ + V E
Sbjct: 672 GTVLVDVPTPSWITETVTSGSVGFTTTIATPIGTTAGTVLVDIPTPSWVTE 722
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 725 TLIVACPTPEQISVFISSASLISHSEPVLPYGTKAKPSVVRKPSVTSVPE 774
T++V PTP ++ ++S S+ + P GT A VV P+ + V E
Sbjct: 817 TVLVDIPTPSWVTETVTSGSVGFTTTIATPVGTTAGTVVVDVPTPSWVTE 866
>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 31.5 bits (68), Expect = 0.47
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 17/161 (10%)
Query: 96 YKQLEDRRNECISLNEQINEAMSDLHKLTEQYNFVSNKTNAL-HNMSEQLLADQNKLSGI 154
++ L+ RNEC N +I+E L LT+ YN + +L MS+++L + S +
Sbjct: 300 FEILKRERNEC---NAKIDELQDKLELLTDAYNREKRRARSLEERMSKEMLTKLGE-SNV 355
Query: 155 GDDIKKRLHYFT---QVEHLSQRLNSPTMSVN--SDAFFNVLAKIDECLDYMRENSNYKE 209
DD Y T + E LS+ L S + NVL +D MR + E
Sbjct: 356 -DDGMAASRYDTVKREKERLSEHLKSLQEQYEHIQSVYKNVL--LDRESYIMRLGNKISE 412
Query: 210 SHTYLVKYRHLQNRAISVIRSYVNHVLDHATEQVLGPQEDA 250
++ L + R L+ + +++Y++ + T ++ E++
Sbjct: 413 NNELLNENRVLKEK----LQTYLDKKESNVTSKIKSTAENS 449
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux
transporter Bfr1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1530
Score = 31.1 bits (67), Expect = 0.62
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 166 TQVEHLSQRLNSPT----MSVNSDAFFNVLAKIDECLDYMRENSNYKESHTYLVKYRHLQ 221
T + L LN T +S +SD F + + +DE LD +SN K SHT +YR
Sbjct: 8 THGQALGSTLNHTTEVTRISNSSDHFEDSSSNVDESLDSSNPSSNEKASHTN-EEYRSKG 66
Query: 222 NRAISVIRSYVNHVLDHATEQVLGPQEDAGSEEENVD 258
N +SYV + + + + + S++ +VD
Sbjct: 67 N------QSYVPSSSNEPSPESSSNSDSSSSDDSSVD 97
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 31.1 bits (67), Expect = 0.62
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 81 CDDNMKTEDV-PYQCYYKQLEDRRNECISLNEQINEAMSDL----HKLTEQYNFVSNKTN 135
C++ +K+ V P + + K + N + +INEA+ D K EQ+N + + +
Sbjct: 927 CNEKIKSLGVLPEEAFIKYVSTSSNAIVKKLHKINEALKDYGSVNKKAYEQFNNFTKQRD 986
Query: 136 ALHNMSEQLLADQNKLSGIGDDIKKR 161
+L E+L Q +S + + +R
Sbjct: 987 SLLARREELRRSQESISELTTVLDQR 1012
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 30.7 bits (66), Expect = 0.81
Identities = 31/165 (18%), Positives = 74/165 (44%), Gaps = 8/165 (4%)
Query: 6 LKEIQSKLLLWESSENPLAPLNSDQREAILDLESLILGVNDEGGENGPIEKETVDQKSIP 65
++ +++++L W++ LA L + R+ LDL S + + +E +D+K
Sbjct: 467 IESLKNQILTWKNKYEALAKLYTQLRQEHLDLLSKYKQIQLKASS----AQEAIDKKEKM 522
Query: 66 SVDTTYDFLEWYERLCD-DNMKTE-DVPYQCYYKQLEDRRNECISLNEQINEAMSDLHKL 123
+ LE + + + D + E + ++ + E E L E+ A + +K
Sbjct: 523 EREMKNKNLELADMILERDRARHELETMHRSQRDKQESTERELRLLQEK--AASLERNKS 580
Query: 124 TEQYNFVSNKTNALHNMSEQLLADQNKLSGIGDDIKKRLHYFTQV 168
+E N +S + ++ + L + +L+ +G ++K + + Q+
Sbjct: 581 SEVSNLLSRYNTEVAHLEDALHSKDRELANLGVELKSTENRYRQL 625
>SPBC16D10.04c |dna2||DNA replication endonuclease-helicase
Dna2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1398
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/77 (23%), Positives = 39/77 (50%)
Query: 523 ITANATSVDGELFQIKHLLILREQIAPFQVDFVIKETTLDFSNVKNAAYGLIQRPRQIFS 582
+ +N+ ++ GEL + H L + A + +TL SN+ + L+++ + IF+
Sbjct: 1283 VRSNSKNLVGELLRDWHRLNVALSRAKVKCIMFGSLSTLSSSNIVSHLLKLLEKNKWIFT 1342
Query: 583 LSSNNALLEFLLEGTPM 599
L+ N+ +F +P+
Sbjct: 1343 LNENDIATKFDENSSPI 1359
>SPCC338.13 |cog4||Golgi transport complex subunit Cog4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 738
Score = 28.7 bits (61), Expect = 3.3
Identities = 40/183 (21%), Positives = 84/183 (45%), Gaps = 28/183 (15%)
Query: 113 INEAMSDLHKLTEQYNFVSNKTNALHNMSEQLLADQN---KLSGIGDDIKKRLHYFT-QV 168
IN+ +D+ ++ ++++ + ++ E+LL+D K + + ++ +RL F Q+
Sbjct: 5 INDC-TDISQIKQRFHDLQVESQRTDEKLERLLSDAQPTEKFNSLIKNMAERLVLFVGQI 63
Query: 169 EHLSQRLNSPTMSVNSDAFFNVLA------KIDECLDYMRENSNYKE---------SHTY 213
E L + T+ V+ + + + +I ECL ++R+ ++KE H
Sbjct: 64 EELKDAFCNTTI-VSEEVIERIKSVDREQNRIKECLLFVRQVRDFKECLQDLNRAMHHQQ 122
Query: 214 LVKYRHLQNRAIS----VIRSYVNHVLDHATEQVLGPQEDAGSEEENVDTAYAVFFGKFQ 269
K L +RA S +I H + EQ L P + + +E ++ + +F+ +F
Sbjct: 123 WEKAADLVHRASSTSPAIIEGKFAHAVVPTAEQPLAPMD---TLKEITESLHTLFWREFH 179
Query: 270 AAA 272
AA
Sbjct: 180 KAA 182
>SPBC16A3.02c |||mitochondrial peptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 347
Score = 28.7 bits (61), Expect = 3.3
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 127 YNFVSN--KTNALHNMSEQLLADQNKLSGIGDDIKKRLHYFTQVEHLSQRLNSPTMSVNS 184
Y+FV + N L+ S + + GIG DI L Y LS+ L + +S
Sbjct: 231 YDFVFDCVNDNVLYRASSKFVKPDGAFFGIGGDIT--LSYVGS--RLSRTLRPRVLGGSS 286
Query: 185 DAFFNVLAKIDE 196
+++N+L +D+
Sbjct: 287 HSYYNILLHVDQ 298
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 727 IVACPTPEQISVFISSASLISHSEPVL 753
I++ PTP S+ ISS+S+IS S +L
Sbjct: 624 ILSSPTPSTSSLMISSSSIISGSSSIL 650
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 28.3 bits (60), Expect = 4.3
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 583 LSSNNALLEFLLEGTPMVREHLLDSRKEVDRQLKSCCETFIKNATELLAGPMAVFTDKAQ 642
L ++N LE LLE E L+S KE + LKS F++ L + + ++ +
Sbjct: 315 LQNSNGELEKLLEAAQSSFEEQLESHKEAEASLKSQI-NFLEKEVSSLESQLKLANERLR 373
Query: 643 AFTPID 648
+ I+
Sbjct: 374 HYDEIE 379
>SPAC2F3.06c |kap104||karyopherin Kap104|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 910
Score = 28.3 bits (60), Expect = 4.3
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 542 ILREQIAPFQVDFVIKETTLDFSNVKNAAYGLIQRPRQIFSLSSNNALLEFLLEGTPM 599
+L+EQ+ ++ VIK + + S +NAA L+++ + I L NN L L+ T +
Sbjct: 7 VLQEQVL-VELSEVIKNSLSENSQTRNAALNLLEKAKDIPDL--NNYLTCILINATEL 61
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 81 CDDNMKTEDVPYQCYYKQLEDRRNECISLNEQINEAMSDLHKL 123
CD ++ ED Y+ + +LE ++E+I A ++ KL
Sbjct: 814 CDKQVQLEDTRYRQHLSELESLNQRFTEISERIPSAELEISKL 856
>SPCC1840.08c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 561
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 11 SKLLLWESSENPLAPLNSDQREAILDLESLILGVNDEG 48
S++ W+SS L PL D ILD +L + EG
Sbjct: 454 SRMFYWDSSAKGL-PLTLDDSSLILDTTFRVLAITGEG 490
>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1822
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 102 RRNECISLNEQI-NEAMSDLHKLTEQYNFVSNKTNALHN 139
+R CI +E++ N+A S L KL Q S KTN +N
Sbjct: 926 QRVACIQASEEMANKATSVLKKLLYQQKHGSQKTNVYYN 964
>SPBC30D10.03c |||IMP 5'-nucleotidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 405
Score = 27.9 bits (59), Expect = 5.7
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 607 SRKEVDRQLKSCC-ETFIKNATELLAGPMAVFTDKAQAFTPIDQL--KSEPWATPEQLAV 663
SR V+ LK + FI+ LL+ P + QA TP +L + + T E+ AV
Sbjct: 3 SRYRVEYALKQHRKDDFIEWIKGLLSVPFVL-----QAGTPSQKLVTREKEQETLERYAV 57
Query: 664 VVKEVQKRIKAHL 676
++++V+K I+AH+
Sbjct: 58 ILRDVEKLIEAHI 70
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 27.9 bits (59), Expect = 5.7
Identities = 32/156 (20%), Positives = 64/156 (41%), Gaps = 7/156 (4%)
Query: 109 LNEQINEAMSDLHK-LTEQYNFVSNKTNALHNMSEQLLADQNKLSGIGDDIKKRLHYFTQ 167
LNEQ + +L + + + N +A EQ ++K+ D K + +
Sbjct: 166 LNEQDGKKSDNLRNGVNKVKQNMRNGASARDQAREQGSKAKDKIKNDPDAQKAKEETKQK 225
Query: 168 VEHLSQRLNSPTMSVNSDAFF-----NVLAKIDECLDYMRENSNYKESHTYLVKYRHLQN 222
++ L + S + + D + ++L ID+ +D + E S + T Y
Sbjct: 226 LQDLYEEFKSVAVDLQGDPKYQHPVRSLLNLIDKFIDKLSEQSGNVTADTN-EHYDRAMQ 284
Query: 223 RAISVIRSYVNHVLDHATEQVLGPQEDAGSEEENVD 258
++ + +N LD+ + + Q DA ++EE D
Sbjct: 285 YLKQLVENILNRSLDNLIDTLKQVQHDAENDEELKD 320
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 27.9 bits (59), Expect = 5.7
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 131 SNKTNA--LHNMSEQLLAD-QNKLSGIGDDIKKRLHYFTQVEHLSQRLNSP 178
+N NA L+ S Q+L NKL+G D+K++L QVE L Q+ +P
Sbjct: 2271 TNGVNAEGLNERSIQVLKRVSNKLTGKDFDLKEQLPVKAQVEKLIQQATAP 2321
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 725 TLIVACPTPEQISVFISSASLISHSEPVLPYGTKAKPSVVRKPSVTSVPE 774
T++V PTP ++ ++S S+ + P GT A VV P+ + V E
Sbjct: 680 TVLVDIPTPSWVTETVTSGSVEFTTTIATPVGTTAGTVVVDIPTPSWVTE 729
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.131 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,405,262
Number of Sequences: 5004
Number of extensions: 143173
Number of successful extensions: 565
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 523
Number of HSP's gapped (non-prelim): 55
length of query: 785
length of database: 2,362,478
effective HSP length: 78
effective length of query: 707
effective length of database: 1,972,166
effective search space: 1394321362
effective search space used: 1394321362
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 58 (27.5 bits)
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