GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002708-TA|BGIBMGA002708-PA|IPR007265|Sec34-like protein
         (785 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    38   0.001
AJ276487-1|CAB90819.1|  375|Anopheles gambiae serine protease pr...    33   0.038
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    29   0.62 
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    26   3.3  
AY146734-1|AAO12094.1|  176|Anopheles gambiae odorant-binding pr...    26   4.4  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   7.7  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    25   7.7  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 37.9 bits (84), Expect = 0.001
 Identities = 28/139 (20%), Positives = 63/139 (45%), Gaps = 7/139 (5%)

Query: 97  KQLEDRRNECISLNEQINEAMSDLHKLTEQYNFVSNKTNALHNMSEQLLADQNKL-SGIG 155
           +QL + RNE ++  ++I + ++D  ++  + +    +   L    E  +  + +    + 
Sbjct: 857 RQLTNCRNEVVATEKRIKKVLTDTEEVDRKLSEALKQQKTLQKELESWIQKEKEAQEKLE 916

Query: 156 DDIKKRLHYFTQVEHLSQRLNSPTMSVNSDAFFNVLAKIDECLDYMRENSNYKE---SHT 212
           +D K+   + T+   L Q+++  T  +   A    L  +D     M   S +KE   ++ 
Sbjct: 917 EDGKRMEKWATKENMLRQKIDECTEKI---AGLGALPNVDASYQKMSLKSLFKELEKANQ 973

Query: 213 YLVKYRHLQNRAISVIRSY 231
           +L KY H+  +A+    S+
Sbjct: 974 HLKKYNHVNKKALDQFLSF 992


>AJ276487-1|CAB90819.1|  375|Anopheles gambiae serine protease
           protein.
          Length = 375

 Score = 32.7 bits (71), Expect = 0.038
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)

Query: 705 VGYFVQIEQLLVNAGYSYEDTLIVACPTPEQISVFISSASL-ISHSEPVLPYGTKAKPSV 763
           V  FVQ  +  VNAG    D +++      + +VF++   L +S+    LP+G+   P +
Sbjct: 194 VARFVQHPEYRVNAGVHVNDIVLIELAADVEYNVFVAPICLPVSNDTAQLPWGSSDDPEI 253


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 28.7 bits (61), Expect = 0.62
 Identities = 15/57 (26%), Positives = 25/57 (43%)

Query: 562  DFSNVKNAAYGLIQRPRQIFSLSSNNALLEFLLEGTPMVREHLLDSRKEVDRQLKSC 618
            DFS + N +YG   R      L   +  ++F+L   P    H + S +E+   +  C
Sbjct: 1592 DFSVLANDSYGCHDRAHVFIYLIREDQRVKFILRQRPSEIRHNIQSFREILSNVSGC 1648


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 26.2 bits (55), Expect = 3.3
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 3/56 (5%)

Query: 82  DDNMKTEDVPYQCYYKQLEDRRNECISLNEQINEAMSDLHKLTEQYNFVSNKTNAL 137
           +DN   E +   CYY+ +   R +    +  ++EA  DL  LTE +  V N  +AL
Sbjct: 72  NDNATAEYL--SCYYQNVRGLRTKTKEFHLAVSEADFDLIALTETW-LVDNIPSAL 124


>AY146734-1|AAO12094.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP24 protein.
          Length = 176

 Score = 25.8 bits (54), Expect = 4.4
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 7/67 (10%)

Query: 581 FSLSSNNALLEFLLEGTPMVREHLLDSRKEVDRQLKSCC-ETFI--KNATELLAGPMAVF 637
           F L S+  +    L+G  +  EH+    + + +  + C  ET I  KNA  +L+G  +V 
Sbjct: 30  FKLYSSLFVFPSPLQGARLEAEHV----RRIHQNARECVKETGILPKNAFRVLSGDFSVD 85

Query: 638 TDKAQAF 644
           T KA+ F
Sbjct: 86  TMKAKCF 92


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.0 bits (52), Expect = 7.7
 Identities = 12/29 (41%), Positives = 13/29 (44%)

Query: 750 EPVLPYGTKAKPSVVRKPSVTSVPEKLEE 778
           EP+  YG     S   KP     PEK EE
Sbjct: 271 EPLAVYGLDGNDSASDKPDTDGEPEKDEE 299


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 25.0 bits (52), Expect = 7.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 98  QLEDRRNECISLNEQINEAMSDLHKLTE 125
           QLE   NE + L+E  N  + +  +LTE
Sbjct: 101 QLEKTENEIVELSENNNALLQNFMELTE 128


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.131    0.371 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 739,158
Number of Sequences: 2123
Number of extensions: 29282
Number of successful extensions: 74
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 69
Number of HSP's gapped (non-prelim): 8
length of query: 785
length of database: 516,269
effective HSP length: 69
effective length of query: 716
effective length of database: 369,782
effective search space: 264763912
effective search space used: 264763912
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)