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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002708-TA|BGIBMGA002708-PA|IPR007265|Sec34-like protein
         (785 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB212858-1|BAE66673.1|  792|Caenorhabditis elegans COGC-3 protein.    186   4e-47
AC024852-4|AAT81182.1|  794|Caenorhabditis elegans Conserved oli...   185   1e-46
AC024852-5|AAO21418.1|  477|Caenorhabditis elegans Conserved oli...   163   6e-40
U39849-8|AAA81050.1|  479|Caenorhabditis elegans Hypothetical pr...    32   1.4  
U41106-2|AAA82410.1|  797|Caenorhabditis elegans Hypothetical pr...    32   1.8  
AC024822-1|AAF59593.1|  117|Caenorhabditis elegans Hypothetical ...    31   3.1  
U80437-8|AAB37623.1|  630|Caenorhabditis elegans Exocyst compone...    31   4.1  
U23484-5|AAK93844.1|  590|Caenorhabditis elegans Hypothetical pr...    31   4.1  
AY818712-1|AAX35668.1|  728|Caenorhabditis elegans LIN-65L protein.    31   4.1  
AC025726-22|AAN73851.2|  512|Caenorhabditis elegans Abnormal cel...    31   4.1  
AC025726-21|AAK73935.3|  728|Caenorhabditis elegans Abnormal cel...    31   4.1  
U41268-1|AAA82433.2|  234|Caenorhabditis elegans Temporarily ass...    30   5.5  
Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr...    30   7.2  
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr...    30   7.2  
U39744-4|AAK18885.4|  389|Caenorhabditis elegans Hypothetical pr...    30   7.2  

>AB212858-1|BAE66673.1|  792|Caenorhabditis elegans COGC-3 protein.
          Length = 792

 Score =  186 bits (454), Expect = 4e-47
 Identities = 137/457 (29%), Positives = 223/457 (48%), Gaps = 62/457 (13%)

Query: 319 QSSQALEEYLQSLCNGLYETLRPHIIHINHLETLAELCVILRIEVIE------------- 365
           Q     E + + +C  LY+ LRP I+H  HLETLAELC +++IE+IE             
Sbjct: 363 QQVHPFETFSEQMCRTLYDMLRPRIVHNPHLETLAELCTMIKIEMIENRCSLQMVASILG 422

Query: 366 EQVNNDPVSLRALGTCAG------ALLQDAAERLVFRAHVHLRADVLLYRPAPGDLAYPN 419
           +  +ND  ++  L   AG       L+ D AER+V+RA ++ + D+  YRPA GD+AYP 
Sbjct: 423 DDASNDQ-NVSGLNPRAGFVSVMSELVGDIAERIVYRAGMYAQNDIAAYRPAAGDIAYPQ 481

Query: 420 KLLMMEQIALSIQEQSLKRSDSRNSMVSDVSATSQEVANINVEAQRRPHASPADLHGMWY 479
            L M+ +I    +EQ  K  +  ++                        A+  D H +WY
Sbjct: 482 MLQMIRKIENEQKEQQEKEPEEGSAP-----------------------ATAIDQHCLWY 518

Query: 480 PTVRRTLAALSRLYRCLEKRVFQGLAQEAISLCVQSVDTAARLITAN-------ATSVDG 532
           PTVRRT+  LS+++ CL+  VF  LA++ +  C+ S++TA++ I  +       +  +D 
Sbjct: 519 PTVRRTVMCLSKIFPCLDIGVFHSLARDMLFSCIDSLETASKAIMESPAPAKGWSKKLDA 578

Query: 533 ELFQIKHLLILREQIAPFQVDFV------IKETTLDFSNVKNAAYGLIQRPRQIFSLSSN 586
            LF +KHLLILREQ AP++ + +       K+ ++DFS   N    L     + F LS++
Sbjct: 579 HLFVVKHLLILREQTAPYRQNVLRSDSLNTKDFSIDFSKFTNV---LFDSKSKWFELSTD 635

Query: 587 NALLEFLLEGTPMVREHLLDSRKEVDRQLKSCCETFIKNATELLAGPMAVFTDKAQAFTP 646
           NALLE +      +RE   DSR+ +D+QL++        A+ L+   +A + + A+    
Sbjct: 636 NALLELITTVPIEMREQEGDSRRVLDQQLRASTFRLAHEASLLMIRDLADWIEIAEDERM 695

Query: 647 ID--QLKSEPWATPEQLAVVVKEVQKRIKAHLAPLQRSMQLYLANKETEFILFKPIRNNV 704
            +  QL   P      L  V     + +      ++ +  LY+   ETE IL  P+R  V
Sbjct: 696 KEGFQLSGHPKLAAGVLKDVSAVAYRNVGTKFTEIRAAYTLYIGVPETEEILLSPVRKRV 755

Query: 705 VGYFVQIEQLLVNAGYSYEDTLIVACPTPEQISVFIS 741
           +  F ++     +  Y  E   I   P  +Q+ + ++
Sbjct: 756 IDIFTRVIS-FASKTYDAESLAIAGLPNVQQLILLLN 791



 Score = 97.5 bits (232), Expect = 3e-20
 Identities = 59/185 (31%), Positives = 99/185 (53%), Gaps = 10/185 (5%)

Query: 109 LNEQINEAMSDLHKLTEQYNFVSNKTNALHNMSEQLLADQNKLSGIGDDIKKRLHYFTQV 168
           L +QI+ + + +++L E Y  VS++T +LH+  ++ LA+Q  LS     IK  L+YF Q 
Sbjct: 76  LQKQIDNSKATMNELREAYESVSSRTCSLHDACDRALAEQTSLSTGSQLIKTNLYYFKQA 135

Query: 169 EHLSQRLNSPTMSVNSDAFFNVLAKIDECLDYMRENSNYKESHTYLVKYRHLQNRAISVI 228
           + + ++L+   + V   +F  +L  IDECL Y+R +  YKES  Y+ K+    +RA++ +
Sbjct: 136 DAIMKKLSVAKLMVTGHSFAAILVSIDECLTYLRAHPEYKESEAYISKFEQCLSRAMTWV 195

Query: 229 RSYV--------NHVLDHATEQVLGPQEDAGSEEENVDTAYAVFFGKFQAAAPKLRKVIG 280
           R  V        N V D   +  L   E  G   +  DT +A+ +G F + A  ++  I 
Sbjct: 196 RVAVLADLEACFNAVKDRQAQLEL-DYEKIGRAGQEEDT-FALLYGVFASKAAVVKASIN 253

Query: 281 EIEQR 285
            +EQR
Sbjct: 254 VVEQR 258


>AC024852-4|AAT81182.1|  794|Caenorhabditis elegans Conserved
           oligomeric golgi (cog)component protein 3, isoform a
           protein.
          Length = 794

 Score =  185 bits (450), Expect = 1e-46
 Identities = 137/459 (29%), Positives = 223/459 (48%), Gaps = 64/459 (13%)

Query: 319 QSSQALEEYLQSLCNGLYETLRPHIIHINHLETLAELCVILRIEVIE------------- 365
           Q     E + + +C  LY+ LRP I+H  HLETLAELC +++IE+IE             
Sbjct: 363 QQVHPFETFSEQMCRTLYDMLRPRIVHNPHLETLAELCTMIKIEMIENRCSLQMVASILG 422

Query: 366 EQVNNDPVSLRALGTCAG------ALLQDAAERLVFRAHVHLRADVLLYRPAPGDLAYPN 419
           +  +ND  ++  L   AG       L+ D AER+V+RA ++ + D+  YRPA GD+AYP 
Sbjct: 423 DDASNDQ-NVSGLNPRAGFVSVMSELVGDIAERIVYRAGMYAQNDIAAYRPAAGDIAYPQ 481

Query: 420 KLLMMEQIALSIQEQSLKRSDSRNSMVSDVSATSQEVANINVEAQRRPHASPADLHGMWY 479
            L M+ +I    +EQ  K  +  ++                        A+  D H +WY
Sbjct: 482 MLQMIRKIENEQKEQQEKEPEEGSAP-----------------------ATAIDQHCLWY 518

Query: 480 PTVRRTLAALSRLYRCLEKRVFQGLAQEAISLCVQSVDTAARLITAN-------ATSVDG 532
           PTVRRT+  LS+++ CL+  VF  LA++ +  C+ S++TA++ I  +       +  +D 
Sbjct: 519 PTVRRTVMCLSKIFPCLDIGVFHSLARDMLFSCIDSLETASKAIMESPAPAKGWSKKLDA 578

Query: 533 ELFQIKHLLILREQIAPFQVDFV--------IKETTLDFSNVKNAAYGLIQRPRQIFSLS 584
            LF +KHLLILREQ AP++ + +         K+ ++DFS   N    L     + F LS
Sbjct: 579 HLFVVKHLLILREQTAPYRQNVLSFRSDSLNTKDFSIDFSKFTNV---LFDSKSKWFELS 635

Query: 585 SNNALLEFLLEGTPMVREHLLDSRKEVDRQLKSCCETFIKNATELLAGPMAVFTDKAQAF 644
           ++NALLE +      +RE   DSR+ +D+QL++        A+ L+   +A + + A+  
Sbjct: 636 TDNALLELITTVPIEMREQEGDSRRVLDQQLRASTFRLAHEASLLMIRDLADWIEIAEDE 695

Query: 645 TPID--QLKSEPWATPEQLAVVVKEVQKRIKAHLAPLQRSMQLYLANKETEFILFKPIRN 702
              +  QL   P      L  V     + +      ++ +  LY+   ETE IL  P+R 
Sbjct: 696 RMKEGFQLSGHPKLAAGVLKDVSAVAYRNVGTKFTEIRAAYTLYIGVPETEEILLSPVRK 755

Query: 703 NVVGYFVQIEQLLVNAGYSYEDTLIVACPTPEQISVFIS 741
            V+  F ++     +  Y  E   I   P  +Q+ + ++
Sbjct: 756 RVIDIFTRVIS-FASKTYDAESLAIAGLPNVQQLILLLN 793



 Score = 97.5 bits (232), Expect = 3e-20
 Identities = 59/185 (31%), Positives = 99/185 (53%), Gaps = 10/185 (5%)

Query: 109 LNEQINEAMSDLHKLTEQYNFVSNKTNALHNMSEQLLADQNKLSGIGDDIKKRLHYFTQV 168
           L +QI+ + + +++L E Y  VS++T +LH+  ++ LA+Q  LS     IK  L+YF Q 
Sbjct: 76  LQKQIDNSKATMNELREAYESVSSRTCSLHDACDRALAEQTSLSTGSQLIKTNLYYFKQA 135

Query: 169 EHLSQRLNSPTMSVNSDAFFNVLAKIDECLDYMRENSNYKESHTYLVKYRHLQNRAISVI 228
           + + ++L+   + V   +F  +L  IDECL Y+R +  YKES  Y+ K+    +RA++ +
Sbjct: 136 DAIMKKLSVAKLMVTGHSFAAILVSIDECLTYLRAHPEYKESEAYISKFEQCLSRAMTWV 195

Query: 229 RSYV--------NHVLDHATEQVLGPQEDAGSEEENVDTAYAVFFGKFQAAAPKLRKVIG 280
           R  V        N V D   +  L   E  G   +  DT +A+ +G F + A  ++  I 
Sbjct: 196 RVAVLADLEACFNAVKDRQAQLEL-DYEKIGRAGQEEDT-FALLYGVFASKAAVVKASIN 253

Query: 281 EIEQR 285
            +EQR
Sbjct: 254 VVEQR 258


>AC024852-5|AAO21418.1|  477|Caenorhabditis elegans Conserved
           oligomeric golgi (cog)component protein 3, isoform b
           protein.
          Length = 477

 Score =  163 bits (395), Expect = 6e-40
 Identities = 116/358 (32%), Positives = 185/358 (51%), Gaps = 61/358 (17%)

Query: 319 QSSQALEEYLQSLCNGLYETLRPHIIHINHLETLAELCVILRIEVIE------------- 365
           Q     E + + +C  LY+ LRP I+H  HLETLAELC +++IE+IE             
Sbjct: 96  QQVHPFETFSEQMCRTLYDMLRPRIVHNPHLETLAELCTMIKIEMIENRCSLQMVASILG 155

Query: 366 EQVNNDPVSLRALGTCAG------ALLQDAAERLVFRAHVHLRADVLLYRPAPGDLAYPN 419
           +  +ND  ++  L   AG       L+ D AER+V+RA ++ + D+  YRPA GD+AYP 
Sbjct: 156 DDASNDQ-NVSGLNPRAGFVSVMSELVGDIAERIVYRAGMYAQNDIAAYRPAAGDIAYPQ 214

Query: 420 KLLMMEQIALSIQEQSLKRSDSRNSMVSDVSATSQEVANINVEAQRRPHASPADLHGMWY 479
            L M+ +I    +EQ  K  +  ++                        A+  D H +WY
Sbjct: 215 MLQMIRKIENEQKEQQEKEPEEGSAP-----------------------ATAIDQHCLWY 251

Query: 480 PTVRRTLAALSRLYRCLEKRVFQGLAQEAISLCVQSVDTAARLITAN-------ATSVDG 532
           PTVRRT+  LS+++ CL+  VF  LA++ +  C+ S++TA++ I  +       +  +D 
Sbjct: 252 PTVRRTVMCLSKIFPCLDIGVFHSLARDMLFSCIDSLETASKAIMESPAPAKGWSKKLDA 311

Query: 533 ELFQIKHLLILREQIAPFQVDFV--------IKETTLDFSNVKNAAYGLIQRPRQIFSLS 584
            LF +KHLLILREQ AP++ + +         K+ ++DFS   N    L     + F LS
Sbjct: 312 HLFVVKHLLILREQTAPYRQNVLSFRSDSLNTKDFSIDFSKFTNV---LFDSKSKWFELS 368

Query: 585 SNNALLEFLLEGTPMVREHLLDSRKEVDRQLKSCCETFIKNATELLAGPMAVFTDKAQ 642
           ++NALLE +      +RE   DSR+ +D+QL++        A+ L+   +A + + A+
Sbjct: 369 TDNALLELITTVPIEMREQEGDSRRVLDQQLRASTFRLAHEASLLMIRDLADWIEIAE 426


>U39849-8|AAA81050.1|  479|Caenorhabditis elegans Hypothetical
           protein C06A8.5 protein.
          Length = 479

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 5/121 (4%)

Query: 34  ILDLESLILGVNDEGGENGPIEKETVDQKSIPSVDTTYDFLE-WYERLCDDNMKTEDVPY 92
           ILD ++LI  +  E  +   I KE  +   IP  D +  F E    R+ +D  K ++   
Sbjct: 73  ILDRDALIDSLRSEIDKLEKINKEFANGSVIPEHDDSNSFGESEMLRISEDCQKYKETAT 132

Query: 93  QCYYKQLEDRRNECISLNEQINEAMSDLHKLTEQYNFVSNKTNALHNMSEQLLADQNKLS 152
             Y +  E    E ++L ++I   M  +  L    N +  +   +  +  +L  ++N   
Sbjct: 133 ALYERNAE-LEKEAVNLKDEIESMMDHIRDLK---NHMETRDEEIARLEGELFDERNSHE 188

Query: 153 G 153
           G
Sbjct: 189 G 189


>U41106-2|AAA82410.1|  797|Caenorhabditis elegans Hypothetical
           protein W06A11.2 protein.
          Length = 797

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 6/98 (6%)

Query: 119 DLHKLTEQ--YNFVSNKTNALH-NMSEQLLADQNKLSGIGDDIKKR--LHYFTQV-EHLS 172
           +LH L E+  Y       +  H N SE L    N +      I+K+  + Y  ++ EH  
Sbjct: 420 NLHYLAEKCFYEIRDLLESGQHFNASEFLRKIINLIETSSCPIRKKHGISYLIELAEHQC 479

Query: 173 QRLNSPTMSVNSDAFFNVLAKIDECLDYMRENSNYKES 210
           Q+L    +S+  D   N + ++ E  DY+ EN +Y  S
Sbjct: 480 QKLTLLEVSILLDTLLNQVLELPEIDDYLSENKSYNIS 517


>AC024822-1|AAF59593.1|  117|Caenorhabditis elegans Hypothetical
           protein Y55B1BL.1 protein.
          Length = 117

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 12/37 (32%), Positives = 22/37 (59%)

Query: 121 HKLTEQYNFVSNKTNALHNMSEQLLADQNKLSGIGDD 157
           ++L +QY +V N  N+  NM + L+ + +K S   +D
Sbjct: 53  NELEQQYQYVMNNKNSTRNMKDHLVPNNSKCSSDDED 89


>U80437-8|AAB37623.1|  630|Caenorhabditis elegans Exocyst component
           protein 7 protein.
          Length = 630

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 16/103 (15%), Positives = 46/103 (44%), Gaps = 1/103 (0%)

Query: 107 ISLNEQINEAMSDL-HKLTEQYNFVSNKTNALHNMSEQLLADQNKLSGIGDDIKKRLHYF 165
           I+ + QI + +  +  K  ++ + +      +H  + +L   Q+ +  + + I   L ++
Sbjct: 50  IAKSAQIRQGIEQVVEKFDQRLSSLEKNVLPMHISNGKLQKKQHNIQRLINTIDATLQFY 109

Query: 166 TQVEHLSQRLNSPTMSVNSDAFFNVLAKIDECLDYMRENSNYK 208
            +   +   +NS   SV+ D +   +  + + + +   + NY+
Sbjct: 110 GKTSTVENAINSGNPSVDLDPYLENMESLQQAIIFFETHPNYR 152


>U23484-5|AAK93844.1|  590|Caenorhabditis elegans Hypothetical
           protein EEED8.16 protein.
          Length = 590

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 39/181 (21%), Positives = 72/181 (39%), Gaps = 10/181 (5%)

Query: 98  QLEDRRNECISLNEQINEAMSDLHKLTEQYNFVSNKTNALHNMSEQLLADQNKLSGIGDD 157
           QLED+R     L   + + MS + K    Y  V N  + L   S +L + +  L    D 
Sbjct: 415 QLEDQRKYFEGLRHDMEQTMSKMEKTA--YAQVENLEHQLTERSTELKSLKGDLD---DT 469

Query: 158 IKKRLHYFTQVEHLSQRLNSPTMSVNSDAFFNVLAKIDECLDYMRENSNYKESHTYLVKY 217
           +  R     +    ++++N     +  +   N + + D+ +   +     +   T   +Y
Sbjct: 470 VTARKVAEKRATQTNEKVNKLANELKDEREINQMLRKDQQVWKGQVEKLIESQKTARTEY 529

Query: 218 RHLQNRAISVIRSYVNHVLDH-ATEQVLGPQEDAGSEEENVDTAYAVFFGKFQAAAPKLR 276
                + I  ++S VN +L H  T+  L  Q DAG   +   T   V      +++ KL 
Sbjct: 530 ----EKKIEDLQSQVNDLLMHFETQNKLKEQLDAGKITQEEITESQVELDSSSSSSRKLN 585

Query: 277 K 277
           +
Sbjct: 586 R 586


>AY818712-1|AAX35668.1|  728|Caenorhabditis elegans LIN-65L
          protein.
          Length = 728

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 15/57 (26%), Positives = 28/57 (49%)

Query: 9  IQSKLLLWESSENPLAPLNSDQREAILDLESLILGVNDEGGENGPIEKETVDQKSIP 65
          I   +L  E+S++P+ PLN DQ   +L  +  I+ + ++  E+  +     D    P
Sbjct: 5  IDESILNTEASDDPIPPLNDDQIAELLGEDGEIMEITEQKDESDDVVMLDDDDDDTP 61


>AC025726-22|AAN73851.2|  512|Caenorhabditis elegans Abnormal cell
          lineage protein 65,isoform b protein.
          Length = 512

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 15/57 (26%), Positives = 28/57 (49%)

Query: 9  IQSKLLLWESSENPLAPLNSDQREAILDLESLILGVNDEGGENGPIEKETVDQKSIP 65
          I   +L  E+S++P+ PLN DQ   +L  +  I+ + ++  E+  +     D    P
Sbjct: 5  IDESILNTEASDDPIPPLNDDQIAELLGEDGEIMEITEQKDESDDVVMLDDDDDDTP 61


>AC025726-21|AAK73935.3|  728|Caenorhabditis elegans Abnormal cell
          lineage protein 65,isoform a protein.
          Length = 728

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 15/57 (26%), Positives = 28/57 (49%)

Query: 9  IQSKLLLWESSENPLAPLNSDQREAILDLESLILGVNDEGGENGPIEKETVDQKSIP 65
          I   +L  E+S++P+ PLN DQ   +L  +  I+ + ++  E+  +     D    P
Sbjct: 5  IDESILNTEASDDPIPPLNDDQIAELLGEDGEIMEITEQKDESDDVVMLDDDDDDTP 61


>U41268-1|AAA82433.2|  234|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 81 protein.
          Length = 234

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 1/87 (1%)

Query: 85  MKTEDVPYQCYYKQLEDRRNECISLNEQINEAMSDLHKLTEQYNFVSNKTNA-LHNMSEQ 143
           + TE+   +    ++ D   E   LN Q  ++   + +  +Q N  + +T A L +  EQ
Sbjct: 15  LPTEETVQKRIKLKMVDLDAEIAKLNVQSLDSSIQMIRDIDQMNVDAVQTTAALEDQDEQ 74

Query: 144 LLADQNKLSGIGDDIKKRLHYFTQVEH 170
           L   +  LS + DD+    H  T +EH
Sbjct: 75  LDKIEANLSNVIDDLNVVSHNITAMEH 101


>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical protein
            F25C8.3b protein.
          Length = 3175

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 2/36 (5%)

Query: 328  LQSLCNGLYETLR--PHIIHINHLETLAELCVILRI 361
            L S  NG+ +TL   P+I H++ L T+ +LC+ + +
Sbjct: 2662 LSSWINGICDTLNAFPYIAHLHPLRTITQLCLRMMV 2697


>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical protein
            F25C8.3a protein.
          Length = 3184

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 2/36 (5%)

Query: 328  LQSLCNGLYETLR--PHIIHINHLETLAELCVILRI 361
            L S  NG+ +TL   P+I H++ L T+ +LC+ + +
Sbjct: 2671 LSSWINGICDTLNAFPYIAHLHPLRTITQLCLRMMV 2706


>U39744-4|AAK18885.4|  389|Caenorhabditis elegans Hypothetical
           protein C03F11.4 protein.
          Length = 389

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 191 LAKIDECLDYMRENSNYKESHTYLVKYRHLQNRAISVIRSYVNHVLDHATE 241
           + ++DE L+Y  ENS +       ++ R+L+ R   +   Y+   L+H TE
Sbjct: 179 IKQLDEDLEYYVENSKFYLRIN--LRDRYLETRVDEISEKYIGPALEHKTE 227


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.317    0.131    0.371 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,101,145
Number of Sequences: 27539
Number of extensions: 758378
Number of successful extensions: 2540
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2513
Number of HSP's gapped (non-prelim): 26
length of query: 785
length of database: 12,573,161
effective HSP length: 87
effective length of query: 698
effective length of database: 10,177,268
effective search space: 7103733064
effective search space used: 7103733064
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 63 (29.5 bits)

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