Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002707-TA|BGIBMGA002707-PA|IPR000580|TSC-22 / Dip / Bun
(101 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U49947-3|AAK68211.1| 114|Caenorhabditis elegans Hypothetical pr... 56 6e-09
Z68119-6|CAA92196.1| 102|Caenorhabditis elegans Hypothetical pr... 53 4e-08
AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical ... 49 5e-07
Z29560-10|CAA82663.1| 296|Caenorhabditis elegans Hypothetical p... 29 0.59
AY462219-1|AAR26006.1| 358|Caenorhabditis elegans GATA transcri... 29 0.78
AF353302-1|AAK32716.1| 376|Caenorhabditis elegans GATA-like tra... 29 0.78
AF067612-7|AAD36952.2| 376|Caenorhabditis elegans Egg laying de... 29 0.78
AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical... 28 1.0
Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z50794-6|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical pr... 27 1.8
AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha ... 27 1.8
AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like ... 27 1.8
Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical pr... 27 3.1
Z66513-15|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical p... 27 3.1
U41271-1|AAA82443.1| 215|Caenorhabditis elegans Hypothetical pr... 27 3.1
U41107-11|AAC71161.1| 454|Caenorhabditis elegans Hypothetical p... 27 3.1
U41107-10|AAN39669.1| 416|Caenorhabditis elegans Hypothetical p... 27 3.1
U41107-9|AAK73877.1| 471|Caenorhabditis elegans Hypothetical pr... 27 3.1
U41107-8|AAN39670.1| 468|Caenorhabditis elegans Hypothetical pr... 27 3.1
Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z12017-2|CAA78048.1| 455|Caenorhabditis elegans Hypothetical pr... 26 4.1
AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAue... 26 4.1
Z49908-3|CAA90094.2| 382|Caenorhabditis elegans Hypothetical pr... 26 5.5
AL021171-3|CAB54258.1| 749|Caenorhabditis elegans Hypothetical ... 26 5.5
AL021171-2|CAA15957.1| 747|Caenorhabditis elegans Hypothetical ... 26 5.5
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 25 7.2
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 25 7.2
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 25 7.2
Z36753-3|CAA85332.1| 297|Caenorhabditis elegans Hypothetical pr... 25 7.2
U55363-9|AAA97967.1| 184|Caenorhabditis elegans Hypothetical pr... 25 7.2
U14635-2|AAC46656.2| 522|Caenorhabditis elegans Hypothetical pr... 25 7.2
Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical pr... 25 9.6
Z83316-3|CAB05895.3| 1054|Caenorhabditis elegans Hypothetical pr... 25 9.6
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 25 9.6
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 25 9.6
X78553-1|CAA55296.1| 543|Caenorhabditis elegans cytoplasmic int... 25 9.6
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 25 9.6
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 25 9.6
U49831-2|AAK68314.1| 526|Caenorhabditis elegans Intermediate fi... 25 9.6
U49831-1|AAA93405.1| 543|Caenorhabditis elegans Intermediate fi... 25 9.6
>U49947-3|AAK68211.1| 114|Caenorhabditis elegans Hypothetical
protein C30G4.7 protein.
Length = 114
Score = 55.6 bits (128), Expect = 6e-09
Identities = 27/51 (52%), Positives = 36/51 (70%)
Query: 34 DLVKSHLMFAVREEVEVLKERIAELMERITQLEVENTYLRAHASQDTLAQL 84
DLVK+HLMFAVREEV+ L+ +I +L + +LE EN+ L+ DTL QL
Sbjct: 60 DLVKTHLMFAVREEVDGLRGKIFDLENHVRRLEAENSILKRTIPNDTLKQL 110
>Z68119-6|CAA92196.1| 102|Caenorhabditis elegans Hypothetical
protein T18D3.7 protein.
Length = 102
Score = 52.8 bits (121), Expect = 4e-08
Identities = 27/53 (50%), Positives = 34/53 (64%)
Query: 34 DLVKSHLMFAVREEVEVLKERIAELMERITQLEVENTYLRAHASQDTLAQLPA 86
DLVK+HL FAVREEVE L+ I +L R+ L EN LR + S + LA + A
Sbjct: 44 DLVKTHLTFAVREEVETLRTTITDLEARLNALREENRLLRENVSPEVLAFITA 96
>AL117203-9|CAB60420.3| 675|Caenorhabditis elegans Hypothetical
protein Y48C3A.12 protein.
Length = 675
Score = 49.2 bits (112), Expect = 5e-07
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 34 DLVKSHLMFAVREEVEVLKERIAELMERITQLEVENTYLRAHASQDTLAQLPAAQGNKPA 93
+LVK+HL +AVREEV+ L+ IAEL ++ + + E TY R + + D + Q + + A
Sbjct: 489 ELVKTHLTYAVREEVDTLRNTIAELEYQMRESQYECTYYRQNCAPDLIEQASSFVHQQMA 548
Query: 94 AQPQP 98
+ +P
Sbjct: 549 SHQRP 553
>Z29560-10|CAA82663.1| 296|Caenorhabditis elegans Hypothetical
protein K03H1.11 protein.
Length = 296
Score = 29.1 bits (62), Expect = 0.59
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 34 DLVKSHLMFAVREEV-EVLKERIAELMERITQLEVENTYLRAHASQDTLAQLPAAQGNKP 92
D + H+ REE+ E+L + +++ I L++EN + S + LAQL N P
Sbjct: 63 DEFELHIPKVNREEIQELLHFLMPQIVNEIHSLQLENELVGDEISDEQLAQLLQLTKNAP 122
Query: 93 AAQ 95
Q
Sbjct: 123 LKQ 125
>AY462219-1|AAR26006.1| 358|Caenorhabditis elegans GATA
transcription factor EGL-18A protein.
Length = 358
Score = 28.7 bits (61), Expect = 0.78
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 14 YEIRQRGQKEPCYVVVPNPKDLVKSHLMFAVREEVEVLKERIAELMERITQLE 66
+E+ QR EPC KD+ K+ M V E ++ L+ R+ EL++ +L+
Sbjct: 19 HEVLQRPSDEPCSGCKQLQKDVAKTISM--VMERMDKLQYRLDELLKENNELK 69
>AF353302-1|AAK32716.1| 376|Caenorhabditis elegans GATA-like
transcription factorELT-5 protein.
Length = 376
Score = 28.7 bits (61), Expect = 0.78
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 14 YEIRQRGQKEPCYVVVPNPKDLVKSHLMFAVREEVEVLKERIAELMERITQLE 66
+E+ QR EPC KD+ K+ M V E ++ L+ R+ EL++ +L+
Sbjct: 19 HEVLQRPSDEPCSGCKQLQKDVAKTISM--VMERMDKLQYRLDELLKENNELK 69
>AF067612-7|AAD36952.2| 376|Caenorhabditis elegans Egg laying
defective protein 18 protein.
Length = 376
Score = 28.7 bits (61), Expect = 0.78
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 14 YEIRQRGQKEPCYVVVPNPKDLVKSHLMFAVREEVEVLKERIAELMERITQLE 66
+E+ QR EPC KD+ K+ M V E ++ L+ R+ EL++ +L+
Sbjct: 19 HEVLQRPSDEPCSGCKQLQKDVAKTISM--VMERMDKLQYRLDELLKENNELK 69
>AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical
protein Y47G6A.17 protein.
Length = 1736
Score = 28.3 bits (60), Expect = 1.0
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 9 RDACLYEIRQRGQKEPCYVVVPNPKDLVKSHLMFAVREEVEVLKERIAELMERITQLEVE 68
RD+ L E R + +P PK + + +RE +++ +ER+ E E++ Q+ E
Sbjct: 1622 RDSILEERRLSQKSFDEQPNIPAPKSDTSDY--YQLRESLQMTQERLIESQEKLIQM--E 1677
Query: 69 NTYLRAHASQDTL 81
Y H D L
Sbjct: 1678 RDYSSLHEKFDRL 1690
>Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical
protein T01G1.1a protein.
Length = 1605
Score = 27.5 bits (58), Expect = 1.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 47 EVEVLKERIAELMERITQLEVENTYLRAHASQDTLAQLPAA 87
EV L+ R+ L E + L EN L+A +++A LP A
Sbjct: 418 EVNHLRFRVKALNETLDILRTENIDLKAKQEFNSIASLPTA 458
>Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical
protein T01G1.1a protein.
Length = 1605
Score = 27.5 bits (58), Expect = 1.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 47 EVEVLKERIAELMERITQLEVENTYLRAHASQDTLAQLPAA 87
EV L+ R+ L E + L EN L+A +++A LP A
Sbjct: 418 EVNHLRFRVKALNETLDILRTENIDLKAKQEFNSIASLPTA 458
>Z50794-6|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical
protein F59F5.6 protein.
Length = 1139
Score = 27.5 bits (58), Expect = 1.8
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 44 VREEVEVLKERIAELMERITQLEVENTYLRAHASQDTLAQLPAAQGNKP 92
VRE + V ER+A L E ++ EN+ L+A + A N P
Sbjct: 181 VRERLRVAMERVATLEEELSTKGDENSSLKARIATYAAEAEEAMASNAP 229
>AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha
homolog SYD-2 protein.
Length = 1139
Score = 27.5 bits (58), Expect = 1.8
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 44 VREEVEVLKERIAELMERITQLEVENTYLRAHASQDTLAQLPAAQGNKP 92
VRE + V ER+A L E ++ EN+ L+A + A N P
Sbjct: 181 VRERLRVAMERVATLEEELSTKGDENSSLKARIATYAAEAEEAMASNAP 229
>AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like
protein KLP-12 protein.
Length = 1609
Score = 27.5 bits (58), Expect = 1.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 47 EVEVLKERIAELMERITQLEVENTYLRAHASQDTLAQLPAA 87
EV L+ R+ L E + L EN L+A +++A LP A
Sbjct: 422 EVNHLRFRVKALNETLDILRTENIDLKAKQEFNSIASLPTA 462
>Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 26.6 bits (56), Expect = 3.1
Identities = 18/61 (29%), Positives = 27/61 (44%)
Query: 33 KDLVKSHLMFAVREEVEVLKERIAELMERITQLEVENTYLRAHASQDTLAQLPAAQGNKP 92
KDL A ++VE L E I E+ ++I +E E + + + T P Q K
Sbjct: 727 KDLRAELAQTANEDQVENLNESIEEMQKKIPLIEDEVKDILKNVADITADMAPVIQERKE 786
Query: 93 A 93
A
Sbjct: 787 A 787
>Z66513-15|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 26.6 bits (56), Expect = 3.1
Identities = 18/61 (29%), Positives = 27/61 (44%)
Query: 33 KDLVKSHLMFAVREEVEVLKERIAELMERITQLEVENTYLRAHASQDTLAQLPAAQGNKP 92
KDL A ++VE L E I E+ ++I +E E + + + T P Q K
Sbjct: 727 KDLRAELAQTANEDQVENLNESIEEMQKKIPLIEDEVKDILKNVADITADMAPVIQERKE 786
Query: 93 A 93
A
Sbjct: 787 A 787
>U41271-1|AAA82443.1| 215|Caenorhabditis elegans Hypothetical
protein C46H3.1 protein.
Length = 215
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 69 NTYLRAHASQDTLAQLPAAQGNKPAAQPQPP 99
N Y+R H SQ A +P G P P PP
Sbjct: 123 NNYIR-HLSQQLNASIPGLPGVAPLQLPVPP 152
>U41107-11|AAC71161.1| 454|Caenorhabditis elegans Hypothetical
protein F55C12.1a protein.
Length = 454
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 44 VREEVEVLKERIAELMERITQLEVENTYLRAHASQDTLAQLPA 86
+ EE+E+LK ++AELM+ ++ + + +A P+
Sbjct: 240 MHEEIEILKAKVAELMKEKEEMTDQLLATSVERGRSLIADTPS 282
>U41107-10|AAN39669.1| 416|Caenorhabditis elegans Hypothetical
protein F55C12.1c protein.
Length = 416
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 44 VREEVEVLKERIAELMERITQLEVENTYLRAHASQDTLAQLPA 86
+ EE+E+LK ++AELM+ ++ + + +A P+
Sbjct: 202 MHEEIEILKAKVAELMKEKEEMTDQLLATSVERGRSLIADTPS 244
>U41107-9|AAK73877.1| 471|Caenorhabditis elegans Hypothetical
protein F55C12.1b protein.
Length = 471
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 44 VREEVEVLKERIAELMERITQLEVENTYLRAHASQDTLAQLPA 86
+ EE+E+LK ++AELM+ ++ + + +A P+
Sbjct: 257 MHEEIEILKAKVAELMKEKEEMTDQLLATSVERGRSLIADTPS 299
>U41107-8|AAN39670.1| 468|Caenorhabditis elegans Hypothetical
protein F55C12.1d protein.
Length = 468
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 44 VREEVEVLKERIAELMERITQLEVENTYLRAHASQDTLAQLPA 86
+ EE+E+LK ++AELM+ ++ + + +A P+
Sbjct: 254 MHEEIEILKAKVAELMKEKEEMTDQLLATSVERGRSLIADTPS 296
>Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical
protein W01G7.1 protein.
Length = 627
Score = 26.2 bits (55), Expect = 4.1
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 43 AVREEVEVLKERIAELMERITQLEVENTYLRAHA-SQDTLAQLPAAQGNKPAAQPQPP 99
A R+E++ L E+ A L L LR HA ++ A N+P P PP
Sbjct: 462 ATRQEIQQLAEQFANLDRDAKLLTPMEFVLREHALLKNVSADAIRVLCNRPPLPPLPP 519
>Z12017-2|CAA78048.1| 455|Caenorhabditis elegans Hypothetical
protein R08D7.2 protein.
Length = 455
Score = 26.2 bits (55), Expect = 4.1
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 79 DTLAQLPAAQGNKPAAQPQPPV 100
+ LA+L A GNK A Q +PP+
Sbjct: 243 EVLAKLRAKYGNKNALQKKPPI 264
>AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAuer
Formation DAF-5,a Ski oncogene homolog involved in a
neuronal TGF betapathway (71.0 kD) (daf-5) protein.
Length = 627
Score = 26.2 bits (55), Expect = 4.1
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 43 AVREEVEVLKERIAELMERITQLEVENTYLRAHA-SQDTLAQLPAAQGNKPAAQPQPP 99
A R+E++ L E+ A L L LR HA ++ A N+P P PP
Sbjct: 462 ATRQEIQQLAEQFANLDRDAKLLTPMEFVLREHALLKNVSADAIRVLCNRPPLPPLPP 519
>Z49908-3|CAA90094.2| 382|Caenorhabditis elegans Hypothetical
protein C07E3.3 protein.
Length = 382
Score = 25.8 bits (54), Expect = 5.5
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 51 LKERIAELMERITQLEVENTYLRAHASQDTLAQLPAAQGNKPAAQ 95
L++RI R ++E+E +R H S++ + + A + N+PA Q
Sbjct: 51 LRDRIRREQLRKREVELETLRIRQHESREPI--IDAYRQNQPAPQ 93
>AL021171-3|CAB54258.1| 749|Caenorhabditis elegans Hypothetical
protein H04D03.2b protein.
Length = 749
Score = 25.8 bits (54), Expect = 5.5
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 4 VVQKPRDACLYEIRQRGQKEPCYVVVPNPKDLVK---SHLMFAVREEVEVLKERIAELME 60
V++KP D L + +EP ++ P D + +H A E E + R+A+ E
Sbjct: 386 VIEKPTD--LSGVLDFLDEEPAPNLLAEPMDFTEFGGNHDDVAQLNEYEKML-RMAQWGE 442
Query: 61 R-ITQLEVENTYLRAHASQDTLAQLPAAQGNKPAAQPQPPVS 101
+ + E +NT + + + PA + KP+ P PV+
Sbjct: 443 YPVQETEGQNTGSLETENMNPASSAPARKRGKPSRDPTKPVA 484
>AL021171-2|CAA15957.1| 747|Caenorhabditis elegans Hypothetical
protein H04D03.2a protein.
Length = 747
Score = 25.8 bits (54), Expect = 5.5
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 4 VVQKPRDACLYEIRQRGQKEPCYVVVPNPKDLVK---SHLMFAVREEVEVLKERIAELME 60
V++KP D L + +EP ++ P D + +H A E E + R+A+ E
Sbjct: 386 VIEKPTD--LSGVLDFLDEEPAPNLLAEPMDFTEFGGNHDDVAQLNEYEKML-RMAQWGE 442
Query: 61 R-ITQLEVENTYLRAHASQDTLAQLPAAQGNKPAAQPQPPVS 101
+ + E +NT + + + PA + KP+ P PV+
Sbjct: 443 YPVQETEGQNTGSLETENMNPASSAPARKRGKPSRDPTKPVA 484
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 25.4 bits (53), Expect = 7.2
Identities = 8/34 (23%), Positives = 23/34 (67%)
Query: 40 LMFAVREEVEVLKERIAELMERITQLEVENTYLR 73
L+ +++++ +L++RIA+ + + +++N LR
Sbjct: 919 LVLELKKQISILEKRIADSNSSLEECKIQNAELR 952
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 25.4 bits (53), Expect = 7.2
Identities = 8/34 (23%), Positives = 23/34 (67%)
Query: 40 LMFAVREEVEVLKERIAELMERITQLEVENTYLR 73
L+ +++++ +L++RIA+ + + +++N LR
Sbjct: 919 LVLELKKQISILEKRIADSNSSLEECKIQNAELR 952
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 25.4 bits (53), Expect = 7.2
Identities = 8/34 (23%), Positives = 23/34 (67%)
Query: 40 LMFAVREEVEVLKERIAELMERITQLEVENTYLR 73
L+ +++++ +L++RIA+ + + +++N LR
Sbjct: 919 LVLELKKQISILEKRIADSNSSLEECKIQNAELR 952
>Z36753-3|CAA85332.1| 297|Caenorhabditis elegans Hypothetical
protein T09A5.4 protein.
Length = 297
Score = 25.4 bits (53), Expect = 7.2
Identities = 10/41 (24%), Positives = 23/41 (56%)
Query: 57 ELMERITQLEVENTYLRAHASQDTLAQLPAAQGNKPAAQPQ 97
EL++++ +L+++N YL S + LA + + +P+
Sbjct: 34 ELLQKLKRLKLDNDYLHMWLSYEKLATIVENRSTDKTRKPE 74
>U55363-9|AAA97967.1| 184|Caenorhabditis elegans Hypothetical
protein ZC404.1 protein.
Length = 184
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/56 (21%), Positives = 28/56 (50%)
Query: 5 VQKPRDACLYEIRQRGQKEPCYVVVPNPKDLVKSHLMFAVREEVEVLKERIAELME 60
++ PR+ + R ++P P+ ++++ H+M ++++VE K L E
Sbjct: 11 LRPPREKRVASRRPYRPRKPYLPRPPSQLEIIQQHVMRLIKQQVEQRKREAKRLEE 66
>U14635-2|AAC46656.2| 522|Caenorhabditis elegans Hypothetical
protein C27H5.2a protein.
Length = 522
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 47 EVEVLKERIAELMERITQLEVENTYLRAHAS 77
+V VLKER+AE ++ +L V + L A A+
Sbjct: 482 QVRVLKERLAESDSQVAELNVLVSSLAADAT 512
>Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical protein
B0379.3b protein.
Length = 1050
Score = 25.0 bits (52), Expect = 9.6
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 2 IDVVQKPRDACLYEIRQRGQKEPCYVVV 29
ID+VQ RD+ I +RG EP YVV+
Sbjct: 1018 IDIVQYIRDSSSVAIVERGDIEP-YVVL 1044
>Z83316-3|CAB05895.3| 1054|Caenorhabditis elegans Hypothetical protein
B0379.3a protein.
Length = 1054
Score = 25.0 bits (52), Expect = 9.6
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 2 IDVVQKPRDACLYEIRQRGQKEPCYVVV 29
ID+VQ RD+ I +RG EP YVV+
Sbjct: 1022 IDIVQYIRDSSSVAIVERGDIEP-YVVL 1048
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 25.0 bits (52), Expect = 9.6
Identities = 11/43 (25%), Positives = 24/43 (55%)
Query: 46 EEVEVLKERIAELMERITQLEVENTYLRAHASQDTLAQLPAAQ 88
E VE+LK+++ E+ + ++ +EV+ L + + AA+
Sbjct: 211 EAVELLKQKLEEVEKNMSDVEVQKQLLLESTTSEMKQHAEAAE 253
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 25.0 bits (52), Expect = 9.6
Identities = 11/43 (25%), Positives = 24/43 (55%)
Query: 46 EEVEVLKERIAELMERITQLEVENTYLRAHASQDTLAQLPAAQ 88
E VE+LK+++ E+ + ++ +EV+ L + + AA+
Sbjct: 211 EAVELLKQKLEEVEKNMSDVEVQKQLLLESTTSEMKQHAEAAE 253
>X78553-1|CAA55296.1| 543|Caenorhabditis elegans cytoplasmic
intermediate filamentprotein protein.
Length = 543
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 45 REEVEVLKERIAELMERITQLEVENTYLRAHAS 77
+EE+ + E I L ++++LE N+ L A+
Sbjct: 290 QEEIRKMNESITTLRAKLSELEARNSALEREAN 322
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 25.0 bits (52), Expect = 9.6
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 33 KDLVKSHLMFAVREEVEVLKERIAELMERITQLEVEN 69
++ ++ L RE E+ K A+L ++I QLE+EN
Sbjct: 2054 REAIEKSLNAMERENKELYKN-CAQLQQQIAQLEMEN 2089
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 25.0 bits (52), Expect = 9.6
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 33 KDLVKSHLMFAVREEVEVLKERIAELMERITQLEVEN 69
++ ++ L RE E+ K A+L ++I QLE+EN
Sbjct: 2127 REAIEKSLNAMERENKELYKN-CAQLQQQIAQLEMEN 2162
>U49831-2|AAK68314.1| 526|Caenorhabditis elegans Intermediate
filament, b protein2, isoform c protein.
Length = 526
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 45 REEVEVLKERIAELMERITQLEVENTYLRAHAS 77
+EE+ + E I L ++++LE N+ L A+
Sbjct: 290 QEEIRKMNESITTLRAKLSELEARNSALEREAN 322
>U49831-1|AAA93405.1| 543|Caenorhabditis elegans Intermediate
filament, b protein2, isoform a protein.
Length = 543
Score = 25.0 bits (52), Expect = 9.6
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 45 REEVEVLKERIAELMERITQLEVENTYLRAHAS 77
+EE+ + E I L ++++LE N+ L A+
Sbjct: 290 QEEIRKMNESITTLRAKLSELEARNSALEREAN 322
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.131 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,512,220
Number of Sequences: 27539
Number of extensions: 87348
Number of successful extensions: 406
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 361
Number of HSP's gapped (non-prelim): 59
length of query: 101
length of database: 12,573,161
effective HSP length: 70
effective length of query: 31
effective length of database: 10,645,431
effective search space: 330008361
effective search space used: 330008361
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 52 (25.0 bits)
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