GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002707-TA|BGIBMGA002707-PA|IPR000580|TSC-22 / Dip / Bun
         (101 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    20   5.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   5.1  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    19   9.0  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
          kinase foraging protein.
          Length = 678

 Score = 20.2 bits (40), Expect = 5.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)

Query: 44 VREEVEVLKERIAELMERITQLEVENTYLRAH 75
          ++E + V  E+I EL   + + + E   LR+H
Sbjct: 7  LQELLRVKDEKIVELEALLCRRDAEIQELRSH 38


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.2 bits (40), Expect = 5.1
 Identities = 7/15 (46%), Positives = 8/15 (53%)

Query: 85   PAAQGNKPAAQPQPP 99
            P    NKP  +PQ P
Sbjct: 1117 PGTADNKPQLKPQKP 1131


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 11/40 (27%), Positives = 18/40 (45%)

Query: 34  DLVKSHLMFAVREEVEVLKERIAELMERITQLEVENTYLR 73
           DLV  H     R   + ++E       RI QL+  + +L+
Sbjct: 249 DLVPKHACAEYRRNFKKMQEEKIFEPHRIPQLQEVSEFLK 288


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.131    0.373 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,471
Number of Sequences: 429
Number of extensions: 1177
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 101
length of database: 140,377
effective HSP length: 49
effective length of query: 52
effective length of database: 119,356
effective search space:  6206512
effective search space used:  6206512
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
S2: 38 (19.4 bits)