GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002705-TA|BGIBMGA002705-PA|IPR000580|TSC-22 / Dip / Bun
         (946 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    25   3.2  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   9.8  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 631 EVLSTIVTSQQGATLPTNLQPMASQPQGTTLPANLQSLAGQQPTTNVHPMAPQQGNVPQ- 689
           ++L+ I  + +   +P    P   +PQ T    +  + A +QPT +     PQ    P+ 
Sbjct: 377 QILNAINAALKSDEIPPEPVP-TPEPQPTQTTESEPTQASEQPTESSTTQKPQTTKTPES 435

Query: 690 GN 691
           GN
Sbjct: 436 GN 437


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 658 GTTLPANLQSLAGQQPTTNVHPMAP 682
           GT    +  + AG QPTT  +P  P
Sbjct: 47  GTAADMSAWTSAGLQPTTGYYPYDP 71


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.307    0.121    0.339 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,945
Number of Sequences: 317
Number of extensions: 6379
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 2
length of query: 946
length of database: 114,650
effective HSP length: 63
effective length of query: 883
effective length of database: 94,679
effective search space: 83601557
effective search space used: 83601557
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 47 (23.0 bits)