GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002703-TA|BGIBMGA002703-PA|IPR002345|Lipocalin,
IPR011038|Calycin-like, IPR000566|Lipocalin-related protein and
Bos/Can/Equ allergen
         (257 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    29   0.17 
AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    27   0.71 
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    26   1.2  
L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.     25   2.2  

>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 28.7 bits (61), Expect = 0.17
 Identities = 27/116 (23%), Positives = 43/116 (37%), Gaps = 4/116 (3%)

Query: 119 LTRERLPSLLAMQNAYAVLDRFKISRTFFVKTNQADCTILPDPVAIPIEAKSADVIKNVD 178
           + RER P +        +  R ++ R       Q    +  D +A      + + + N  
Sbjct: 298 MQRERCPEVKQQLRIVYIAARSELQRAIKASKRQHFLKLC-DEIARKPWGLAFNTLMN-- 354

Query: 179 IKVKEKEPVEDSDSVKKQIIDEVVEERSAVPEISFEPKPVPVPEMILTENEKKGEN 234
            KVK  EPVE      K II+ +      +     +P P+   E+I   N  K  N
Sbjct: 355 -KVKSSEPVEQCPVKLKSIIETLFPTHPTINTPETDPVPITRQEIINLANRLKCGN 409


>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 26.6 bits (56), Expect = 0.71
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 214 EPKPVPVPEMILTENEKKGENMEEPKAEDKAEAVEPKAVET 254
           E  P PVPE    + E   E  EE    D+ EA E ++ E+
Sbjct: 63  EDAPEPVPEDGSPDEEHLEEEQEEEAEADEEEADESESEES 103


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 7/97 (7%)

Query: 117 WLLTRERLPSLLAMQNAYAVLDRFKISRTFFVKTNQADCTILPDPVAIPIEAKSA-DVIK 175
           WLL++  +   L M  +    DR   +   FV T   +  ++   VA+    +   D +K
Sbjct: 124 WLLSQTWITRHLWMAKS----DRNASTEKLFV-TPMYNSLLIDQSVAMNRRREDQEDFVK 178

Query: 176 NVD-IKVKEKEPVEDSDSVKKQIIDEVVEERSAVPEI 211
            +D +KVK+ E   + D+   +  D+ ++    +P+I
Sbjct: 179 KIDMVKVKDTEKANEIDAKAHEGKDDKIKPYDRIPQI 215


>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 9/24 (37%), Positives = 17/24 (70%)

Query: 164 IPIEAKSADVIKNVDIKVKEKEPV 187
           I +E + +D I+NV  K+++KE +
Sbjct: 13  ITLEVEPSDTIENVKAKIQDKEGI 36



 Score = 25.0 bits (52), Expect = 2.2
 Identities = 9/24 (37%), Positives = 17/24 (70%)

Query: 164 IPIEAKSADVIKNVDIKVKEKEPV 187
           I +E + +D I+NV  K+++KE +
Sbjct: 89  ITLEVEPSDTIENVKAKIQDKEGI 112



 Score = 25.0 bits (52), Expect = 2.2
 Identities = 9/24 (37%), Positives = 17/24 (70%)

Query: 164 IPIEAKSADVIKNVDIKVKEKEPV 187
           I +E + +D I+NV  K+++KE +
Sbjct: 165 ITLEVEPSDTIENVKAKIQDKEGI 188


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.314    0.131    0.374 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 250,261
Number of Sequences: 2123
Number of extensions: 10201
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 24
Number of HSP's gapped (non-prelim): 6
length of query: 257
length of database: 516,269
effective HSP length: 63
effective length of query: 194
effective length of database: 382,520
effective search space: 74208880
effective search space used: 74208880
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 47 (23.0 bits)