GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002701-TA|BGIBMGA002701-PA|undefined
         (193 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB001872-1|BAA24817.1|  966|Homo sapiens leucine zipper bearing ...    30   5.9  

>AB001872-1|BAA24817.1|  966|Homo sapiens leucine zipper bearing
           kinase protein.
          Length = 966

 Score = 29.9 bits (64), Expect = 5.9
 Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 3/89 (3%)

Query: 50  LRQDVNTRNLLIHH-QRIKNFGYHNPRILADKSTSLTVVPQQASIAASTGPSQPTHRA-- 106
           + +D+ + N+L+ H   +K   +   + L+DKST ++     A +A     ++P      
Sbjct: 276 IHRDLKSPNVLVTHTDAVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPVSEKVD 335

Query: 107 SWSYGTQLHCLITPQQFIAAHDRIINAWG 135
            WS+G  L  L+T +      D     WG
Sbjct: 336 IWSFGVVLWELLTGEIPYKDVDSSAIIWG 364


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.321    0.131    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,566,837
Number of Sequences: 224733
Number of extensions: 1012292
Number of successful extensions: 1799
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1799
Number of HSP's gapped (non-prelim): 1
length of query: 193
length of database: 73,234,838
effective HSP length: 86
effective length of query: 107
effective length of database: 53,907,800
effective search space: 5768134600
effective search space used: 5768134600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 63 (29.5 bits)