GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002700-TA|BGIBMGA002700-PA|IPR008266|Tyrosine protein
kinase, active site, IPR000719|Protein kinase, IPR001245|Tyrosine
protein kinase, IPR002290|Serine/threonine protein kinase,
IPR011009|Protein kinase-like
         (266 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...   121   5e-30
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   7.3  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score =  121 bits (292), Expect = 5e-30
 Identities = 55/132 (41%), Positives = 84/132 (63%)

Query: 135 RELVDLGAQVACGLSYLHVQRFVHADVAARNCVVDEKLRLKVTDNGLARDLFPDDYHCLG 194
           + L+ +  QVA G+ +L   R VH D+AARN +V E   +KV+D GL+RD++ D+ +C  
Sbjct: 592 KHLLSIARQVALGMEHLAKTRVVHRDLAARNVLVCENHTVKVSDFGLSRDVYQDNVYCKN 651

Query: 195 DNENRPVKWMAPETLLQNQYSTASDVWSLGITLWELATLGSSPLAELDAADVGAFLNGGY 254
                PV+WMA E+L   +Y+T SDVWS G+ LWE+ TLG +P   + ++++  FL  G 
Sbjct: 652 GGGKLPVRWMALESLTHQRYTTYSDVWSFGVLLWEIVTLGGTPYVGVHSSELLDFLKSGN 711

Query: 255 RPSQPHNCPDEL 266
           R ++P NC  +L
Sbjct: 712 RLARPANCSPDL 723


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/33 (21%), Positives = 19/33 (57%)

Query: 114 SSNLKRFLSSCRLGQQSAPATRELVDLGAQVAC 146
           ++N++R +   ++      +   L+D G++V+C
Sbjct: 80  NNNIQRVVPEIKIQISQQQSVTALLDTGSEVSC 112


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.135    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,059
Number of Sequences: 317
Number of extensions: 2446
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 266
length of database: 114,650
effective HSP length: 56
effective length of query: 210
effective length of database: 96,898
effective search space: 20348580
effective search space used: 20348580
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 42 (21.0 bits)